Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting

Genome Research

Volumn 25, Issue 1, 2015, Pages 111-118

  Tong, Steven Y C ^a,b   Holden, Matthew T G ^a,h   Nickerson, Emma K ^c   Cooper, Ben S ^d   Koser, Claudio U ^e,f   Cori, Anne ^g   Jombart, Thibaut ^g   Cauchemez, Simon ^g   Fraser, Christophe ^g   Wuthiekanun, Vanaporn ^d   Thaipadungpanit, Janjira ^d   Hongsuwan, Maliwan ^d   Day, Nicholas P ^d   Limmathurotsakul, Direk ^d   Parkhill, Julian ^a   Peacock, Sharon J ^a,c,d,e,f  

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^b MENZIES SCHOOL OF HEALTH RESEARCH   (Australia)

^c CAMBRIDGE UNIVERSITY HOSPITALS NHS FOUNDATION TRUST   (United Kingdom)

^d MAHIDOL UNIVERSITY   (Thailand)

^e UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^f PUBLIC HEALTH ENGLAND   (United Kingdom)

^g IMPERIAL COLLEGE LONDON   (United Kingdom)

^h UNIVERSITY OF ST ANDREWS   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL TRANSMISSION; CHILD; CONTROLLED STUDY; GENE SEQUENCE; GENETIC VARIABILITY; HUMAN; INTENSIVE CARE UNIT; MAJOR CLINICAL STUDY; METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS; PHYLOGENETIC TREE; PHYLOGENY; POPULATION STRUCTURE; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; WHOLE GENOME SEQUENCING; BACTERIUM IDENTIFICATION; BIOLOGY; CLASSIFICATION; CROSS INFECTION; DNA SEQUENCE; EPIDEMIC; GENETICS; HIGH THROUGHPUT SEQUENCING; MICROBIOLOGY; PROSPECTIVE STUDY; STAPHYLOCOCCUS INFECTION; STATISTICAL MODEL;

METHICILLIN RESISTANT STAPHYLOCOCCUS AUREUS;

BACTERIAL DNA;

ADULT; BACTERIAL TYPING TECHNIQUES; CHILD; COMPUTATIONAL BIOLOGY; CROSS INFECTION; DISEASE OUTBREAKS; DNA, BACTERIAL; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; LINEAR MODELS; METHICILLIN-RESISTANT STAPHYLOCOCCUS AUREUS; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; PROSPECTIVE STUDIES; SEQUENCE ANALYSIS, DNA; STAPHYLOCOCCAL INFECTIONS;

EID: 84920661654     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.174730.114     Document Type: Article

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