메뉴 건너뛰기




Volumn 185, Issue 1, 2015, Pages 70-86

The limited contribution of reciprocal gene loss to increased speciation rates following whole-genome duplication

Author keywords

Polyploid; Reciprocal gene loss; Speciation; Whole genome duplication

Indexed keywords

CLADISTICS; DIVERGENCE; EVOLUTIONARY THEORY; GENE EXPRESSION; GENOME; INCOMPATIBILITY; NUMERICAL MODEL; POLYPLOIDY; POPULATION DYNAMICS; REPRODUCTIVE ISOLATION; SPECIATION (BIOLOGY);

EID: 84920366491     PISSN: 00030147     EISSN: None     Source Type: Journal    
DOI: 10.1086/679108     Document Type: Article
Times cited : (23)

References (65)
  • 1
    • 84859897319 scopus 로고    scopus 로고
    • Rarely successful polyploids and their legacy in plant genomes
    • Arrigo, N., and M. S. Barker. 2012. Rarely successful polyploids and their legacy in plant genomes. Current Opinion in Plant Biology 15:140–146.
    • (2012) Current Opinion in Plant Biology , vol.15 , pp. 140-146
    • Arrigo, N.1    Barker, M.S.2
  • 2
    • 33750858684 scopus 로고    scopus 로고
    • Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
    • Aury, J.-M., O. Jaillon, L. Duret, B. Noel, C. Jubin, B. M. Porcel, B. Sègurens, et al. 2006. Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature 444:171-178.
    • (2006) Nature , vol.444 , pp. 171-178
    • Aury, J.-M.1    Jaillon, O.2    Duret, L.3    Noel, B.4    Jubin, C.5    Porcel, B.M.6    Sègurens, B.7
  • 5
    • 59149093200 scopus 로고    scopus 로고
    • Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana
    • Bikard, D., D. Patel, C. Le Mette´, V. Giorgi, C. Camilleri, M. J. Bennett, and O. Loudet. 2009. Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science 323:623–626.
    • (2009) Science , vol.323 , pp. 623-626
    • Bikard, D.1    Patel, D.2    Le Mette´, C.3    Giorgi, V.4    Camilleri, C.5    Bennett, M.J.6    Loudet, O.7
  • 6
    • 0017348549 scopus 로고
    • Selection-mutation balance for two nonallelic recessives producing an inferior double homozygote
    • Christiansen, F. B., and O. Frydenberg. 1977. Selection-mutation balance for two nonallelic recessives producing an inferior double homozygote. American Journal of Human Genetics 29:195–207.
    • (1977) American Journal of Human Genetics , vol.29 , pp. 195-207
    • Christiansen, F.B.1    Frydenberg, O.2
  • 9
    • 33646572856 scopus 로고    scopus 로고
    • What is the role of genome duplication in the evolution of complexity and diversity?
    • Crow, K. D., and G. P. Wagner. 2006. What is the role of genome duplication in the evolution of complexity and diversity?. Molecular Biology and Evolution 23:887–892
    • (2006) Molecular Biology and Evolution , vol.23 , pp. 887-892
    • Crow, K.D.1    Wagner, G.P.2
  • 12
    • 20144366981 scopus 로고    scopus 로고
    • Genome duplication, extinction and vertebrate evolution
    • Donoghue, P. C., and M. A. Purnell. 2005. Genome duplication, extinction and vertebrate evolution. Trends in Ecology and Evolution 20:312–319.
    • (2005) Trends in Ecology and Evolution , vol.20 , pp. 312-319
    • Donoghue, P.C.1    Purnell, M.A.2
  • 13
    • 84860139764 scopus 로고    scopus 로고
    • Multiple continental radiations and correlates of diversification in Lupinus (Leguminosae): Testing for key innovation with incomplete taxon sampling
    • Drummond, C. S., R. J. Eastwood, S. T. Miotto, and C. E. Hughes. 2012. Multiple continental radiations and correlates of diversification in Lupinus (Leguminosae): testing for key innovation with incomplete taxon sampling. Systematic Biology 61:443–460.
    • (2012) Systematic Biology , vol.61 , pp. 443-460
    • Drummond, C.S.1    Eastwood, R.J.2    Miotto, S.T.3    Hughes, C.E.4
  • 14
    • 70349682921 scopus 로고    scopus 로고
    • Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes
    • Edger, P. P., and J. C. Pires. 2009. Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Research 17:699–717.
    • (2009) Chromosome Research , vol.17 , pp. 699-717
    • Edger, P.P.1    Pires, J.C.2
  • 15
    • 65249143921 scopus 로고    scopus 로고
    • Plants with double genomes might have had a better chance to survive the Cretaceous– Tertiary extinction event
    • Fawcett, J. A., S. Maere, and Y. Van de Peer. 2009. Plants with double genomes might have had a better chance to survive the Cretaceous– Tertiary extinction event. Proceedings of the National Academy of Sciences of the USA 106:5737–5742.
    • (2009) Proceedings of the National Academy of Sciences of the USA , vol.106 , pp. 5737-5742
    • Fawcett, J.A.1    Maere, S.2    Van De Peer, Y.3
  • 16
    • 84930751493 scopus 로고    scopus 로고
    • Significance and biological consequences of polyploidization in land plant evolution
    • in I. J. Leitch, J. Greilhuber, and J. Dolezˇel, eds., Springer, Vienna
    • Fawcett, J. A., Y. Van de Peer, and S. Maere. 2013. Significance and biological consequences of polyploidization in land plant evolution. Pages 277–293 in I. J. Leitch, J. Greilhuber, and J. Dolezˇel, eds. Plant genome diversity. Volume 2. Springer, Vienna.
    • (2013) Plant genome diversity. Volume 2 , pp. 277-293
    • Fawcett, J.A.1    Van De Peer, Y.2    Maere, S.3
  • 17
    • 84875447891 scopus 로고    scopus 로고
    • Rapid and recent world-wide diversification of bluegrasses (Poa, Poaceae) and related genera
    • Hoffmann, M. H., J. Schneider, P. Hase, and M. Rőser. 2013. Rapid and recent world-wide diversification of bluegrasses (Poa, Poaceae) and related genera. PLoS ONE 8:e60061.
    • (2013) PLoS ONE , vol.8
    • Hoffmann, M.H.1    Schneider, J.2    Hase, P.3    Rőser, M.4
  • 18
    • 57049151256 scopus 로고    scopus 로고
    • Species selection: Theory and data. Annual Review of Ecology
    • Jablonski, D. 2008. Species selection: theory and data. Annual Review of Ecology, Evolution, and Systematics 39:501–524.
    • (2008) Evolution, and Systematics , vol.39 , pp. 501-524
    • Jablonski, D.1
  • 19
    • 84869088692 scopus 로고    scopus 로고
    • The global diversity of birds in space and time
    • Jetz, W., G. Thomas, J. Joy, K. Hartmann, and A. Mooers. 2012. The global diversity of birds in space and time. Nature 491:444–448.
    • (2012) Nature , vol.491 , pp. 444-448
    • Jetz, W.1    Thomas, G.2    Joy, J.3    Hartmann, K.4    Mooers, A.5
  • 21
    • 34250709215 scopus 로고    scopus 로고
    • The origins of genome architecture
    • Sunderland, MA
    • Lynch, M. 2007. The origins of genome architecture. Sinauer, Sunderland, MA.
    • (2007) Sinauer
    • Lynch, M.1
  • 22
    • 0034634395 scopus 로고    scopus 로고
    • The evolutionary fate and consequences of duplicate genes
    • Lynch, M., and J. S. Conery. 2000. The evolutionary fate and consequences of duplicate genes. Science 290:1151–1155.
    • (2000) Science , vol.290 , pp. 1151-1155
    • Lynch, M.1    Conery, J.S.2
  • 24
    • 0034529964 scopus 로고    scopus 로고
    • The origin of interspecific genomic incompatibility via gene duplication
    • Lynch, M., and A. G. Force. 2000. The origin of interspecific genomic incompatibility via gene duplication. American Naturalist 156: 590–605.
    • (2000) American Naturalist , vol.156 , pp. 590-605
    • Lynch, M.1    Force, A.G.2
  • 25
    • 79953318793 scopus 로고    scopus 로고
    • Reciprocal gene loss following experimental whole-genome duplication causes reproductive isolation in yeast
    • Maclean, C. J., and D. Greig. 2011. Reciprocal gene loss following experimental whole-genome duplication causes reproductive isolation in yeast. Evolution 65:932–945.
    • (2011) Evolution , vol.65 , pp. 932-945
    • Maclean, C.J.1    Greig, D.2
  • 26
    • 84966164067 scopus 로고
    • Reproductive isolation as a pleiotropic effect of copper tolerance in Mimulus guttatus?
    • Macnair, M., and P. Christie. 1983. Reproductive isolation as a pleiotropic effect of copper tolerance in Mimulus guttatus? Heredity 50: 295–302.
    • (1983) Heredity , vol.50 , pp. 295-302
    • Macnair, M.1    Christie, P.2
  • 28
    • 33748490697 scopus 로고    scopus 로고
    • Gene transposition as a cause of hybrid sterility in Drosophila
    • Masly, J. P., C. D. Jones, M. A. Noor, J. Locke, and H. A. Orr. 2006. Gene transposition as a cause of hybrid sterility in Drosophila. Science 313:1448–1450.
    • (2006) Science , vol.313 , pp. 1448-1450
    • Masly, J.P.1    Jones, C.D.2    Noor, M.A.3    Locke, J.4    Orr, H.A.5
  • 31
    • 84872507663 scopus 로고    scopus 로고
    • Evolutionary significance of whole-genome duplication
    • in P. S. Soltis and D. E. Soltis, eds., Springer, Berlin
    • McGrath, C. L., and M. Lynch. 2012. Evolutionary significance of whole-genome duplication. Pages 1–20 in P. S. Soltis and D. E. Soltis, eds. Polyploidy and genome evolution. Springer, Berlin.
    • (2012) Polyploidy and genome evolution , pp. 1-20
    • McGrath, C.L.1    Lynch, M.2
  • 32
    • 33748529969 scopus 로고    scopus 로고
    • On the abundance of polyploids in flowering plants
    • Meyers, L. A., and D. A. Levin. 2006. On the abundance of polyploids in flowering plants. Evolution 60:1198–1206.
    • (2006) Evolution , vol.60 , pp. 1198-1206
    • Meyers, L.A.1    Levin, D.A.2
  • 34
    • 0002101476 scopus 로고
    • Isolating mechanisms, evolution and temperature
    • Muller, H. 1942. Isolating mechanisms, evolution and temperature. Biological Symposia 6:71–125.
    • (1942) Biological Symposia , vol.6 , pp. 71-125
    • Muller, H.1
  • 35
    • 34250683876 scopus 로고    scopus 로고
    • Speciation in Drosophila: From phenotypes to molecules
    • Orr, H. A., J. Masly, and N. Phadnis. 2007. Speciation in Drosophila: from phenotypes to molecules. Journal of Heredity 98:103–110.
    • (2007) Journal of Heredity , vol.98 , pp. 103-110
    • Orr, H.A.1    Masly, J.2    Phadnis, N.3
  • 36
    • 35548954250 scopus 로고    scopus 로고
    • The evolutionary consequences of polyploidy
    • Otto, S. P. 2007. The evolutionary consequences of polyploidy. Cell 131:452–462.
    • (2007) Cell , vol.131 , pp. 452-462
    • Otto, S.P.1
  • 37
  • 38
    • 58449091818 scopus 로고    scopus 로고
    • A single gene causes both male sterility and segregation distortion in Drosophila hybrids
    • Phadnis, N., and H. A. Orr. 2009. A single gene causes both male sterility and segregation distortion in Drosophila hybrids. Science 323:376–379.
    • (2009) Science , vol.323 , pp. 376-379
    • Phadnis, N.1    Orr, H.A.2
  • 39
    • 84931748982 scopus 로고    scopus 로고
    • Species interactions constrain geographic range expansion over evolutionary time
    • Pigot, A. L., and J. A. Tobias. 2013. Species interactions constrain geographic range expansion over evolutionary time. Ecology Letters 16:330–338.
    • (2013) Ecology Letters , vol.16 , pp. 330-338
    • Pigot, A.L.1    Tobias, J.A.2
  • 40
    • 77249093924 scopus 로고    scopus 로고
    • The molecular evolutionary basis of species formation
    • Presgraves, D. C. 2010. The molecular evolutionary basis of species formation. Nature Reviews Genetics 11:175–180.
    • (2010) Nature Reviews Genetics , vol.11 , pp. 175-180
    • Presgraves, D.C.1
  • 41
    • 67649964507 scopus 로고    scopus 로고
    • Ecological limits and diversification rate: Alternative paradigms to explain the variation in species richness among clades and regions
    • Rabosky, D. L. 2009. Ecological limits and diversification rate: alternative paradigms to explain the variation in species richness among clades and regions. Ecology Letters 12:735–743.
    • (2009) Ecology Letters , vol.12 , pp. 735-743
    • Rabosky, D.L.1
  • 42
    • 84884341028 scopus 로고    scopus 로고
    • Macroevolutionary speciation rates are decoupled from the evolution of intrinsic reproductive isolation in Drosophila and birds
    • Rabosky, D. L., and D. R. Matute. 2013. Macroevolutionary speciation rates are decoupled from the evolution of intrinsic reproductive isolation in Drosophila and birds. Proceedings of the National Academy of Sciences of the USA 110:15354–15359.
    • (2013) Proceedings of the National Academy of Sciences of the USA , vol.110 , pp. 15354-15359
    • Rabosky, D.L.1    Matute, D.R.2
  • 43
    • 0032422925 scopus 로고    scopus 로고
    • Pathways, mechanisms, and rates of polyploid formation in flowering plants
    • Ramsey, J., and D. W. Schemske. 1998. Pathways, mechanisms, and rates of polyploid formation in flowering plants. Annual Review of Ecology and Systematics 29:467–501.
    • (1998) Annual Review of Ecology and Systematics , vol.29 , pp. 467-501
    • Ramsey, J.1    Schemske, D.W.2
  • 44
    • 34548139429 scopus 로고    scopus 로고
    • Plant speciation
    • Rieseberg, L. H., and J. H. Willis. 2007. Plant speciation. Science 317: 910–914.
    • (2007) Science , vol.317 , pp. 910-914
    • Rieseberg, L.H.1    Willis, J.H.2
  • 45
    • 70349201094 scopus 로고    scopus 로고
    • Did genome duplication drive the origin of teleosts? a comparative study of diversification in ray-finned fishes
    • Santini, F., L. J. Harmon, G. Carnevale, and M. E. Alfaro. 2009. Did genome duplication drive the origin of teleosts? a comparative study of diversification in ray-finned fishes. BMC Evolutionary Biology 9:194.
    • (2009) BMC Evolutionary Biology , vol.9 , pp. 194
    • Santini, F.1    Harmon, L.J.2    Carnevale, G.3    Alfaro, M.E.4
  • 46
    • 33645023614 scopus 로고    scopus 로고
    • Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts
    • Scannell, D. R., K. P. Byrne, J. L. Gordon, S. Wong, and K. H. Wolfe. 2006. Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts. Nature 440:341–345.
    • (2006) Nature , vol.440 , pp. 341-345
    • Scannell, D.R.1    Byrne, K.P.2    Gordon, J.L.3    Wong, S.4    Wolfe, K.H.5
  • 47
    • 50249150953 scopus 로고    scopus 로고
    • Evolution of Xmrk: An oncogene, but also a speciation gene?
    • Schartl, M. 2008. Evolution of Xmrk: an oncogene, but also a speciation gene? BioEssays 30:822–832.
    • (2008) BioEssays , vol.30 , pp. 822-832
    • Schartl, M.1
  • 48
    • 84859917501 scopus 로고    scopus 로고
    • Ancient whole genome duplications, novelty and diversification: The WGD radiation lag-time model
    • Schranz, E. M., S. Mohammadin, and P. P. Edger. 2012. Ancient whole genome duplications, novelty and diversification: the WGD radiation lag-time model. Current Opinion in Plant Biology 15: 147–153.
    • (2012) Current Opinion in Plant Biology , vol.15 , pp. 147-153
    • Schranz, E.M.1    Mohammadin, S.2    Edger, P.P.3
  • 49
    • 33847065899 scopus 로고    scopus 로고
    • Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor
    • Sèmon, M., and K. H. Wolfe. 2007. Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor. Trends in Genetics 23:108–112.
    • (2007) Trends in Genetics , vol.23 , pp. 108-112
    • Sèmon, M.1    Wolfe, K.H.2
  • 54
    • 0004098021 scopus 로고    scopus 로고
    • version 12, accessed August 29
    • Stevens, P. F. 2001. Angiosperm phylogeny website, version 12. http://www.mobot.org/MOBOT/research/APweb/, accessed August 29, 2013.
    • (2001) Angiosperm phylogeny website
    • Stevens, P.F.1
  • 55
    • 0035368224 scopus 로고    scopus 로고
    • Genome duplication, divergent resolution and speciation
    • Taylor, J. S., Y. Van de Peer, and A. Meyer. 2001. Genome duplication, divergent resolution and speciation. Trends in Genetics 17:299-301.
    • (2001) Trends in Genetics , vol.17 , pp. 299-301
    • Taylor, J.S.1    Van De Peer, Y.2    Meyer, A.3
  • 58
    • 70349325524 scopus 로고    scopus 로고
    • The evolutionary significance of ancient genome duplications
    • Van de Peer, Y., S. Maere, and A. Meyer. 2009. The evolutionary significance of ancient genome duplications. Nature Reviews Genetics 10:725–732.
    • (2009) Nature Reviews Genetics , vol.10 , pp. 725-732
    • Van De Peer, Y.1    Maere, S.2    Meyer, A.3
  • 59
    • 84871822072 scopus 로고    scopus 로고
    • Inference of genome duplications from age distributions revisited
    • Vanneste, K., Y. Van de Peer, and S. Maere. 2013. Inference of genome duplications from age distributions revisited. Molecular Biology and Evolution 30:177–190.
    • (2013) Molecular Biology and Evolution , vol.30 , pp. 177-190
    • Vanneste, K.1    Van De Peer, Y.2    Maere, S.3
  • 60
    • 79953017908 scopus 로고    scopus 로고
    • Limits to speciation inferred from times to secondary sympatry and ages of hybridizing species along a latitudinal gradient
    • Weir, J. T., and T. D. Price. 2011. Limits to speciation inferred from times to secondary sympatry and ages of hybridizing species along a latitudinal gradient. American Naturalist 177:462–469.
    • (2011) American Naturalist , vol.177 , pp. 462-469
    • Weir, J.T.1    Price, T.D.2
  • 61
    • 0001604836 scopus 로고
    • A model for divergent, allopatric speciation of polyploid pteridophytes resulting from silencing of duplicate-gene expression
    • Werth, C. R., and M. D. Windham. 1991. A model for divergent, allopatric speciation of polyploid pteridophytes resulting from silencing of duplicate-gene expression. American Naturalist 137: 515–526.
    • (1991) American Naturalist , vol.137 , pp. 515-526
    • Werth, C.R.1    Windham, M.D.2
  • 62
    • 0030947344 scopus 로고    scopus 로고
    • Molecular evidence for anancient duplication of the entire yeast genome
    • Wolfe, K. H., and D. C. Shields. 1997. Molecular evidence for anancient duplication of the entire yeast genome. Nature 387:708-712.
    • (1997) Nature , vol.387 , pp. 708-712
    • Wolfe, K.H.1    Shields, D.C.2
  • 63
    • 84874524051 scopus 로고    scopus 로고
    • Indirect evolution of hybrid lethality due to linkage with selected locus in Mimulus guttatus
    • Wright, K. M., D. Lloyd, D. B. Lowry, M. R. Macnair, and J. H. Willis. 2013. Indirect evolution of hybrid lethality due to linkage with selected locus in Mimulus guttatus. PLoS Biology 11:e1001497.
    • (2013) PLoS Biology , vol.11
    • Wright, K.M.1    Lloyd, D.2    Lowry, D.B.3    Macnair, M.R.4    Willis, J.H.5
  • 64
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • Wright, S. 1931. Evolution in Mendelian populations. Genetics 16: 97–159.
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.