Cell-surface signalling in pseudomonas

Pseudomonas

Volumn 6, Issue , 2006, Pages 59-95

  Llamas, María A ^a   Bitter, Wilbert ^a  

^a VU UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84920100137     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-3909-5_3     Document Type: Chapter

References (92)

1. Stover, C.K., Pham, X.Q., Erwin, A.L., Mizoguchi, S.D., Warrener, P., Hickey, M.J., Brinkman, F.S., Hufnagle, W.O., Kowalik, D.J., Lagrou, M., Garber, R.L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L.L., Coulter, S.N., Folger, K.R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G.K., Wu, Z., Paulsen, I.T., Reizer, J., Saier, M.H., Hancock, R.E., Lory, S. and Olson., M.V. (2000) Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406: 959-964.
2. Visca, P., Leoni, L., Wilson, M.J. and Lamont, I.L. (2002) Iron transport and regulation, cell signalling and genomics: lessons from Escherichia coli and Pseudomonas. Mol. Microbiol. 45: 1177-1190.
3. Braun, V., Mahren, S. and Sauter, A. (2006) Gene regulation by transmembrane signaling. Biometals 19: 103-113.
4. Braun, V. and Endriss., F. (2007) Energy-coupled outer membrane transport proteins and regulatory proteins. Biometals 20: 219-231.
5. Koebnik, R. (2005) TonB-dependent trans-envelope signalling: The exception or the rule?. Trends. Microbiol. 13: 343-347.
6. Krewulak, K.D. and Vogel, H.J. (2008) Structural biology of bacterial iron uptake. Biochim. Biophys. Acta. 1778: 1781-1804.
7. Llamas, M.A. and Bitter, W. (2006) Iron gate: The translocation system. J. Bacteriol. 188: 3172-3174.
8. Meyer, J.M. (2000) Pyoverdines: Pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch. Microbiol. 174: 135-142.
9. Visca, P., Imperi, F. and Lamont, I.L. (2007) Pyoverdine siderophores: from biogenesis to biosignificance. Trends Microbiol. 15: 22-30.
10. Ravel, J. and Cornelis, P. (2003) Genomics of pyoverdine-mediated iron uptake in pseudomonads. Trends Microbiol. 11: 195-200.
11. Meyer, J.M., Geoffroy, V.A., Baida, N., Gardan, L., Izard, D., Lemanceau, P., Achouak, W. and Palleroni., N.J. (2002) Siderophore typing, a powerful tool for the identification of fluorescent and nonfluorescent pseudomonads. Appl. Environ. Microbiol. 68: 2745-2753.
12. Cornelis, P. and Matthijs, S. (2002) Diversity of siderophore-mediated iron uptake systems in fluorescent pseudomonads: not only pyoverdines. Environ. Microbiol. 4: 787-798.
13. Ghysels, B., Dieu, B.T., Beatson, S.A., Pirnay, J.P., Ochsner, U.A., Vasil, M.L. and Cornelis, P. (2004) FpvB, an alternative type I ferripyoverdine receptor of Pseudomonas aeruginosa. Microbiology 150: 1671-1680.
14. Abdallah, M.A., Pfestorf, M. and Doring, G. (1989) Pseudomonas aeruginosa pyoverdin: Structure and function. Antibiot. Chemother. 42: 8-14.
15. Meyer, J.M., Stintzi, A., De Vos, D., Cornelis, P., Tappe, R., Taraz, K. and Budzikiewicz, H. (1997) Use of siderophores to type pseudomonads: The three Pseudomonas aeruginosa pyoverdine systems. Microbiology 143(Pt 1): 35-43.
16. de Chial, M., Ghysels, B., Beatson, S.A., Geoffroy, V., Meyer, J.M., Pattery, T., Baysse, C., Chablain, P., Parsons, Y.N., Winstanley, C., Cordwell, S.J. and Cornelis, P. (2003) Identification of type II and type III pyoverdine receptors from Pseudomonas aeruginosa. Microbiology 149: 821-831.
17. Poole, K., Neshat, S., Krebes, K. and Heinrichs, D.E. (1993) Cloning and nucleotide sequence analysis of the ferripyoverdine receptor gene fpvA of Pseudomonas aeruginosa. J. Bacteriol. 175: 4597-4604.
18. Brillet, K., Journet, L., Celia, H., Paulus, L., Stahl, A., Pattus, F. and Cobessi., D. (2007) A beta strand lock exchange for signal transduction in TonB-dependent transducers on the basis of a common structural motif. Structure 15: 1383-1391.
19. Clement, E., Mesini, P.J., Pattus, F. and Schalk, I.J. (2004) The binding mechanism of pyoverdin with the outer membrane receptor FpvA in Pseudomonas aeruginosa is dependent on its iron-loaded status. Biochemistry 43: 7954-7965.
20. Cobessi, D., Celia, H., Folschweiller, N., Schalk, I.J., Abdallah, M.A. and Pattus., F. (2005) The crystal structure of the pyoverdine outer membrane receptor FpvA from Pseudomonas aeruginosa at 3.6 angstroms resolution. J. Mol. Biol. 347: 121-134.
21. Nader, M., Dobbelaere, W., Vincent, M., Journet, L., Adams, H., Cobessi, D., Gallay, J. and Schalk., I.J. (2007) Identification of residues of FpvA involved in the different steps of Pvd-Fe uptake in Pseudomonas aeruginosa. Biochemistry 46: 11707-11717.
22. Shen, J.S., Geoffroy, V., Neshat, S., Jia, Z., Meldrum, A., Meyer, J.M. and Poole, K. (2005) FpvA-mediated ferric pyoverdine uptake in Pseudomonas aeruginosa: identification of aromatic residues in FpvA implicated in ferric pyoverdine binding and transport. J. Bacteriol. 187: 8511-8515.
23. Klebba, P.E. (2003) Three paradoxes of ferric enterobactin uptake. Front. Biosci. 8: S1422-s1436.
24. Eisenhauer, H.A., Shames, S., Pawelek, P.D. and Coulton, J.W. (2005) Siderophore transport through Escherichia coli outer membrane receptor FhuA with disulfide-tethered cork and barrel domains. J. Biol. Chem. 280: 30574-30580.
25. Ma, L., Kaserer, W., Annamalai, R., Scott, D.C., Jin, B., Jiang, X., Xiao, Q., Maymani, H., Massis, L.M., Ferreira, L.C., Newton, S.M. and Klebba, P.E. (2007) Evidence of ball-andchain transport of ferric enterobactin through FepA. J. Biol. Chem. 282: 397-406.
26. Gumbart, J., Wiener, M.C. and Tajkhorshid, E. (2007) Mechanics of force propagation in TonB-dependent outer membrane transport. Biophys. J. 93: 496-504.
27. Endriss, F., Braun, M., Killmann, H. and Braun, V. (2003) Mutant analysis of the Escherichia coli FhuA protein reveals sites of FhuA activity. J. Bacteriol. 185: 4683-4692.
28. Chu, B.C., Peacock, R.S. and Vogel, H.J. (2007) Bioinformatic analysis of the TonB protein family. Biometals. 20: 467-483.
29. Poole, K., Zhao, Q., Neshat, S., Heinrichs, D.E., and Dean, C.R. (1996) The Pseudomonas aeruginosa tonB gene encodes a novel TonB protein. Microbiology 142(Pt 6): 1449-1458.
30. Brewer, S., Tolley, M., Trayer, I.P., Barr, G.C., Dorman, C.J., Hannavy, K., Higgins, C.F., Evans, J.S., Levine, B.A. and Wormald., M.R. (1990) Structure and function of X-Pro dipeptide repeats in the TonB proteins of Salmonella typhimurium and Escherichia coli. J. Mol. Biol. 216: 883-895.
31. Pawelek, P.D., Croteau, N., Ng-Thow-Hing, C., Khursigara, C.M., Moiseeva, N., Allaire, M. and Coulton., J.W. (2006) Structure of TonB in complex with FhuA, E. coli outer membrane receptor. Science 312: 1399-1402.
32. Sean Peacock, R., Weljie, A.M., Peter Howard, S., Price, F.D. and Vogel, H.J. (2005) The solution structure of the C-terminal domain of TonB and interaction studies with TonB box peptides. J. Mol. Biol. 345: 1185-1197.
33. Pressler, U., Staudenmaier, H., Zimmermann, L. and Braun, V. (1988) Genetics of the iron dicitrate transport system of Escherichia coli. J. Bacteriol. 170: 2716-2724.
34. Koster, M., van Klompenburg, W., Bitter, W., Leong, J. and Weisbeek, P. (1994) Role for the outer membrane ferric siderophore receptor PupB in signal transduction across the bacterial cell envelope. EMBO. J. 13: 2805-2813.
35. Garcia-Herrero, A. and Vogel, H.J. (2005) Nuclear magnetic resonance solution structure of the periplasmic signalling domain of the TonB-dependent outer membrane transporter FecA from Escherichia coli. Mol. Microbiol. 58: 1226-1237.
36. Wirth, C., Meyer-Klaucke, W., Pattus, F. and Cobessi., D. (2007) From the periplasmic signaling domain to the extracellular face of an outer membrane signal transducer of Pseudomonas aeruginosa: crystal structure of the ferric pyoverdine outer membrane receptor. J. Mol. Biol. 368: 398-406.
37. Breidenstein, E., Mahren, S. and Braun., V. (2006) Residues involved in FecR binding are localized on one side of the FecA signaling domain in Escherichia coli. J. Bacteriol. 188: 6440-6442.
38. Folschweiller, N., Gallay, J., Vincent, M., Abdallah, M.A., Pattus, F. and Schalk, I.J. (2002) The interaction between pyoverdin and its outer membrane receptor in Pseudomonas aeruginosa leads to different conformers: A time-resolved fluorescence study. Biochemistry 41: 14591-14601.
39. Schalk, I.J., Hennard, C., Dugave, C., Poole, K., Abdallah, M.A. and Pattus, F. (2001) Ironfree pyoverdin binds to its outer membrane receptor FpvA in Pseudomonas aeruginosa: A new mechanism for membrane iron transport. Mol. Microbiol. 39: 351-360.
40. Beare, P.A., For, R.J., Martin, L.W. and Lamont, I.L. (2003) Siderophore-mediated cell signalling in Pseudomonas aeruginosa: Divergent pathways regulate virulence factor production and siderophore receptor synthesis. Mol. Microbiol. 47: 195-207.
41. Redly, G.A. and Poole, K. (2005) FpvIR control of fpvA ferric pyoverdine receptor gene expression in Pseudomonas aeruginosa: Demonstration of an interaction between FpvI and FpvR and identification of mutations in each compromising this interaction. J. Bacteriol. 187: 5648-5657.
42. Mahren, S., Enz, S. and Braun, V. (2002) Functional interaction of region 4 of the extracytoplasmic function sigma factor FecI with the cytoplasmic portion of the FecR transmembrane protein of the Escherichia coli ferric citrate transport system. J. Bacteriol. 184: 3704-3711.
43. Stiefel, A., Mahren, S., Ochs, M., Schindler, P.T., Enz, S. and Braun, V. (2001) Control of the ferric citrate transport system of Escherichia coli: mutations in region 2.1 of the FecI extracytoplasmic-function sigma factor suppress mutations in the FecR transmembrane regulatory protein. J. Bacteriol. 183: 162-170.
44. Llamas, M.A., Mooij, M.J., Sparrius, M., Vandenbroucke-Grauls, C.M., Ratledge, C. and Bitter, W. (2008) Characterization of five novel Pseudomonas aeruginosa cell-surface signalling systems. Mol. Microbiol. 67: 458-472.
45. Koster, M., Ovaa, W., Bitter, W. and Weisbeek, P. (1995) Multiple outer membrane receptors for uptake of ferric pseudobactins in Pseudomonas putida WCS358. Mol. Gen. Genet. 248: 735-743.
46. King-Lyons, N.D., Smith, K.F. and Connell, T.D. (2007) Expression of hurP, a gene encoding a prospective site 2 protease, is essential for heme-dependent induction of bhuR in Bordetella bronchiseptica. J. Bacteriol. 189: 6266-6275.
47. Brooks, B.E. and Buchanan, S.K. (2008) Signaling mechanisms for activation of extracytoplasmic function (ECF) sigma factors. Biochim. Biophys. Acta. 1778: 1930-1945.
48. Spencer, M.R., Beare, P.A. and Lamont, I.L. (2008) Role of cell surface signaling in proteolysis of an alternative sigma factor in Pseudomonas aeruginosa. J. Bacteriol. 190: 4865-4869.
49. Bitter, W., Marugg, J.D., deWeger, L.A., Tommassen, J. and Weisbeek., P.J. (1991) The ferricpseudobactin receptor PupA of Pseudomonas putida WCS358: homology to TonB-dependent Escherichia coli receptors and specificity of the protein. Mol. Microbiol. 5: 647-655.
50. Shen, J., Meldrum, A. and Poole, K. (2002) FpvA receptor involvement in pyoverdine biosynthesis in Pseudomonas aeruginosa. J. Bacteriol. 184: 3268-3275.
51. Lamont, I.L., Beare, P.A., Ochsner, U., Vasil, A.I. and Vasil, M.L. (2002) Siderophoremediated signaling regulates virulence factor production in Pseudomonasaeruginosa. Proc. Natl. Acad. Sci. U.S.A 99: 7072-7077.
52. Chen, X., Schauder, S., Potier, N., Van Dorsselaer, A., Pelczer, I., Bassler, B.L. and Hughson., F.M. (2002) Structural identification of a bacterial quorum-sensing signal containing boron. Nature 415: 545-549.
53. Leoni, L., Orsi, N., de Lorenzo, V. and Visca, P. (2000) Functional analysis of PvdS, an iron starvation sigma factor of Pseudomonas aeruginosa. J. Bacteriol. 182: 1481-1491.
54. Wilson, M.J., McMorran, B.J. and Lamont., I.L. (2001) Analysis of promoters recognized by PvdS, an extracytoplasmic-function sigma factor protein from Pseudomonas aeruginosa. J. Bacteriol. 183: 2151-2155.
55. Swingle, B., Thete, D., Moll, M., Myers, C.R., Schneider, D.J. and Cartinhour, S. (2008) Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads. Mol. Microbiol. 68: 871-889.
56. Tiburzi, F., Imperi, F. and Visca, P. (2008) Intracellular levels and activity of PvdS, the major iron starvation sigma factor of Pseudomonas aeruginosa. Mol. Microbiol. 67: 213-227.
57. Maeda, H., Fujita, N. and Ishihama, A. (2000) Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. Nucleic. Acids Res. 28: 3497-3503.
58. Ambrosi, C., Tiburzi, F., Imperi, F., Putignani, L. and Visca, P. (2005) Involvement of AlgQ in transcriptional regulation of pyoverdine genes in Pseudomonas aeruginosa PAO1. J. Bacteriol. 187: 5097-5107.
59. Llamas, M.A., Sparrius, M., Kloet, R., Jimenez, C.R., Vandenbroucke-Grauls, C. and Bitter, W. (2006) The heterologous siderophores ferrioxamine B and ferrichrome activate signaling pathways in Pseudomonas aeruginosa. J. Bacteriol. 188: 1882-1891.
60. Ochsner, U.A., Johnson, Z. and Vasil, M.L. (2000) Genetics and regulation of two distinct haem-uptake systems, phu and has, in Pseudomonas aeruginosa. Microbiology 146(Pt 1): 185-198.
61. Banin, E., Vasil, M.L. and Greenberg, E.P. (2005) Iron and Pseudomonas aeruginosa biofilm formation. Proc. Natl. Acad. Sci. U.S.A 102: 11076-11081.
62. Ochsner, U.A., Wilderman, P.J., Vasil, A.I. and Vasil, M.L. (2002) GeneChip expression analysis of the iron starvation response in Pseudomonas aeruginosa: identification of novel pyoverdine biosynthesis genes. Mol. Microbiol. 45: 1277-1287.
63. Meyer, J.M., Neely, A., Stintzi, A., Georges, C. and Holder, I.A. (1996) Pyoverdin is essential for virulence of Pseudomonas aeruginosa. Infect. Immun. 64: 518-523.
64. Takase, H., Nitanai, H., Hoshino, K. and Otani, T. (2000) Impact of siderophore production on Pseudomonas aeruginosa infections in immunosuppressed mice. Infect. Immun. 68: 1834-1839.
65. Leoni, L., Ciervo, A., Orsi, N. and Visca, P. (1996) Iron-regulated transcription of the pvdA gene in Pseudomonas aeruginosa: effect of Fur and PvdS on promoter activity. J. Bacteriol. 178: 2299-2313.
66. Frost, G.E. and Rosenberg, H. (1973) The inducible citrate-dependent iron transport system in Escherichia coli K12. Biochim. Biophys. Acta 330: 90-101.
67. Hussein, S., Hantke, K. and Braun, V. (1981) Citrate-dependent iron transport system in Escherichia coli K-12. Eur. J. Biochem. 117: 431-437.
68. Braun, V. (1997) Surface signaling: novel transcription initiation mechanism starting from the cell surface. Arch. Microbiol. 167: 325-331.
69. Cox, C.D. (1980) Iron uptake with ferripyochelin and ferric citrate by Pseudomonas aeruginosa. J. Bacteriol. 142: 581-587.
70. Harding, R.A. and Royt, P.W. (1990) Acquisition of iron from citrate by Pseudomonas aeruginosa. J. Gen. Microbiol. 136: 1859-1867.
71. Poole, K. and McKay, G.A. (2003) Iron acquisition and its control in Pseudomonas aeruginosa: many roads lead to Rome. Front. Biosci. 8: D661-d686.
72. Enz, S., Mahren, S., Menzel, C. and Braun, V. (2003) Analysis of the ferric citrate transport gene promoter of Escherichia coli. J. Bacteriol. 185: 2387-2391.
73. O'Cuiv, P.O., Keogh, D., Clarke, P. and O'Connell, M. (2007) FoxB of Pseudomonas aeruginosa functions in the utilization of the xenosiderophores ferrichrome, ferrioxamine B, and schizokinen: evidence for transport redundancy at the inner membrane. J. Bacteriol. 189: 284-287.
74. Ratledge, C. and Dover, L.G. (2000) Iron metabolism in pathogenic bacteria. Annu. Rev. Microbiol. 54: 881-941.
75. Ochs, M., Veitinger, S., Kim, I., Welz, D., Angerer, A. and Braun, V. (1995) Regulation of citrate-dependent iron transport of Escherichia coli: fecR is required for transcription activation by FecI. Mol. Microbiol. 15: 119-132.
76. Sadikot, R.T., Blackwell, T.S., Christman, J.W. and Prince, A.S. (2005) Pathogen-host interactions in Pseudomonas aeruginosa pneumonia. Am. J. Respir. Crit. Care Med. 171: 1209-1223.
77. Wandersman, C. and Delepelaire, P. (2004) Bacterial iron sources: from siderophores to hemophores. Annu. Rev. Microbiol. 58: 611-647.
78. Letoffe, S., Redeker, V. and Wandersman, C. (1998) Isolation and characterization of an extracellular haem-binding protein from Pseudomonas aeruginosa that shares function and sequence similarities with the Serratia marcescens HasA haemophore. Mol. Microbiol. 28: 1223-1234.
79. Rossi, M.S., Paquelin, A., Ghigo, J.M. and Wandersman, C. (2003) Haemophore-mediated signal transduction across the bacterial cell envelope in Serratia marcescens: The inducer and the transported substrate are different molecules. Mol. Microbiol. 48: 1467-1480.
80. Zheng, P., Sun, J., Geffers, R. and Zeng, A.P. (2007) Functional characterization of the gene PA2384 in large-scale gene regulation in response to iron starvation in Pseudomonas aeruginosa. J. Biotechnol. 132: 342-352.
81. Michel-Briand, Y. and Baysse, C. (2002) The pyocins of Pseudomonas aeruginosa. Biochimie 84: 499-510.
82. Ochsner, U.A. and Vasil, M.L. (1996) Gene repression by the ferric uptake regulator in Pseudomonas aeruginosa: cycle selection of iron-regulated genes. Proc. Natl. Acad. Sci. U.S.A 93: 4409-4414.
83. Ball, G., Durand, E., Lazdunski, A. and Filloux, A. (2002) A novel type II secretion system in Pseudomonas aeruginosa. Mol. Microbiol. 43: 475-485.
84. Jacob-Dubuisson, F., Locht, C. and Antoine, R. (2001) Two-partner secretion in Gramnegative bacteria: A thrifty, specific pathway for large virulence proteins. Mol. Microbiol. 40: 306-313.
85. Frisk, A., Schurr, J.R., Wang, G., Bertucci, D.C., Marrero, L., Hwang, S.H., Hassett, D.J. and Schurr, M.J. (2004) Transcriptome analysis of Pseudomonas aeruginosa after interaction with human airway epithelial cells. Infect. Immun. 72: 5433-5438.
86. Aldon, D., Brito, B., Boucher, C. and Genin, S. (2000) A bacterial sensor of plant cell contact controls the transcriptional induction of Ralstonia solanacearum pathogenicity genes. EMBO. J. 19: 2304-2314.
87. Martinez-Bueno, M.A., Tobes, R., Rey, M. and Ramos, J.L. (2002) Detection of multiple extracytoplasmic function (ECF) sigma factors in the genome of Pseudomonas putida KT2440 and their counterparts in Pseudomonas aeruginosa PA01. Environ. Microbiol. 4: 842-855.
88. Oguiza, J.A., Kiil, K. and Ussery, D.W. (2005) Extracytoplasmic function sigma factors in Pseudomonas syringae. Trends Microbiol. 13: 565-568.
89. Maunsell, B., Adams, C. and O'Gara, F. (2006) Complex regulation of AprA metalloprotease in Pseudomonas fluorescens M114: evidence for the involvement of iron, the ECF sigma factor, PbrA and pseudobactin M114 siderophore. Microbiology 152: 29-42.
90. Moon, C.D., Zhang, X.X., Matthijs, S., Schafer, M., Budzikiewicz, H. and Rainey, P.B. (2008) Genomic, genetic and structural analysis of pyoverdine-mediated iron acquisition in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25. BMC Microbiol. 8: 7.
91. Venturi, V., Ottevanger, C., Bracke, M. and Weisbeek, P. (1995) Iron regulation of siderophore biosynthesis and transport in Pseudomonas putida WCS358: involvement of a transcriptional activator and of the Fur protein. Mol. Microbiol. 15: 1081-1093.
92. Sexton, R., Gill, P.R. Jr., Callanan, M.J., O'Sullivan, D.J., Dowling, D.N. and O'Gara, F. (1995) Iron-responsive gene expression in Pseudomonas fluorescens M114: cloning and characterization of a transcription-activating factor, PbrA. Mol. Microbiol. 15: 297-306.