-
1
-
-
29144439725
-
Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements
-
Sato, T., Esaki, M., Fernandez, J. M. & Endo, T. Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements. Proc. Natl Acad. Sci. USA 102, 17999-18004 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 17999-18004
-
-
Sato, T.1
Esaki, M.2
Fernandez, J.M.3
Endo, T.4
-
2
-
-
77953642001
-
Botulinum neurotoxin: A marvel of protein design
-
Montal, M. Botulinum neurotoxin: a marvel of protein design. Annu. Rev. Biochem. 79, 591-617 (2010).
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 591-617
-
-
Montal, M.1
-
3
-
-
76049107424
-
Lethal factor unfolding is the most force-dependent step of anthrax toxin translocation
-
Thoren, K. L., Worden, E. J., Yassif, J. M. & Krantz, B. A. Lethal factor unfolding is the most force-dependent step of anthrax toxin translocation. Proc. Natl Acad. Sci. USA 106, 21555-21560 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, pp. 21555-21560
-
-
Thoren, K.L.1
Worden, E.J.2
Yassif, J.M.3
Krantz, B.A.4
-
4
-
-
84870393391
-
The direction of protein entry into the proteasome determines the variety of products and depends on the force needed to unfold its two termini
-
Berko, D. et al. The direction of protein entry into the proteasome determines the variety of products and depends on the force needed to unfold its two termini. Mol. Cell 48, 601-611 (2012).
-
(2012)
Mol. Cell
, vol.48
, pp. 601-611
-
-
Berko, D.1
-
5
-
-
0033553474
-
Recognition, targeting, and hydrolysis of the lambda O replication protein by the ClpP/ClpX protease
-
Gonciarz-Swiatek, M. et al. Recognition, targeting, and hydrolysis of the lambda O replication protein by the ClpP/ClpX protease. J. Biol. Chem. 274, 13999-14005 (1999).
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 13999-14005
-
-
Gonciarz-Swiatek, M.1
-
6
-
-
0036720126
-
Membrane protein degradation by FtsH can be initiated from either end
-
Chiba, S., Akiyama, Y. & Ito, K. Membrane protein degradation by FtsH can be initiated from either end. J. Bateriol. 184, 4775-4782 (2002).
-
(2002)
J. Bateriol.
, vol.184
, pp. 4775-4782
-
-
Chiba, S.1
Akiyama, Y.2
Ito, K.3
-
7
-
-
0344211512
-
Lack of a robust unfoldase activity confers a unique level of substrate specificity to the universal AAA protease FtsH
-
Herman, C., Prakash, S., Lu, C. Z., Matouschek, A. & Gross, C. A. Lack of a robust unfoldase activity confers a unique level of substrate specificity to the universal AAA protease FtsH. Mol. Cell 11, 659-669 (2003).
-
(2003)
Mol. Cell
, vol.11
, pp. 659-669
-
-
Herman, C.1
Prakash, S.2
Lu, C.Z.3
Matouschek, A.4
Gross, C.A.5
-
8
-
-
61749084334
-
Computer simulations and theory of protein translocation
-
Makarov, D. E. Computer simulations and theory of protein translocation. Acc. Chem. Res. 42, 281-289 (2009).
-
(2009)
Acc. Chem. Res.
, vol.42
, pp. 281-289
-
-
Makarov, D.E.1
-
9
-
-
21744445765
-
Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial pore
-
Tian, P. & Andricioaei, I. Repetitive pulling catalyzes co-translocational unfolding of barnase during import through a mitochondrial pore. J. Mol. Biol. 350, 1017-1034 (2005).
-
(2005)
J. Mol. Biol.
, vol.350
, pp. 1017-1034
-
-
Tian, P.1
Andricioaei, I.2
-
10
-
-
26044464483
-
Computer simulations of the translocation and unfolding of a protein pulled mechanically through a pore
-
Huang, L., Kirmizialtin, S. & Makarov, D. E. Computer simulations of the translocation and unfolding of a protein pulled mechanically through a pore. J. Chem. Phys. 123, 124903 (2005).
-
(2005)
J. Chem. Phys.
, vol.123
, pp. 124903
-
-
Huang, L.1
Kirmizialtin, S.2
Makarov, D.E.3
-
11
-
-
84876412824
-
Multistep protein unfoding during nanopore translocation
-
Rodriguez-Larrea, D. & Bayley, H. Multistep protein unfoding during nanopore translocation. Nat. Nanotechnol. 8, 288-295 (2013).
-
(2013)
Nat. Nanotechnol.
, vol.8
, pp. 288-295
-
-
Rodriguez-Larrea, D.1
Bayley, H.2
-
12
-
-
84875153533
-
Unfoldase-mediated protein translocation through an a -hemolysin nanopore
-
Nivala, J., Marks, D. B. & Akeson, M. Unfoldase-mediated protein translocation through an a -hemolysin nanopore. Nat. Biotech. 31, 247-250 (2013).
-
(2013)
Nat. Biotech.
, vol.31
, pp. 247-250
-
-
Nivala, J.1
Marks, D.B.2
Akeson, M.3
-
13
-
-
54549099396
-
Nucleotide identification and orientation discrimination of DNA homopolymers immobilized in a protein nanopore
-
Purnell, R. F., Mehta, K. K. & Schmidt, J. J. Nucleotide identification and orientation discrimination of DNA homopolymers immobilized in a protein nanopore. Nano Lett. 8, 3029-3034 (2008).
-
(2008)
Nano Lett.
, vol.8
, pp. 3029-3034
-
-
Purnell, R.F.1
Mehta, K.K.2
Schmidt, J.J.3
-
14
-
-
0034298597
-
A. Transport into an asymmetric nanometer-scale pore
-
Henrickson, S. E., Misakian, M., Robertson, B., Kasianowicz, J. J. & Driven, D. N. A. transport into an asymmetric nanometer-scale pore. Phys. Rev. Lett. 85, 3057-3060 (2000).
-
(2000)
Phys. Rev. Lett.
, vol.85
, pp. 3057-3060
-
-
Henrickson, S.E.1
Misakian, M.2
Robertson, B.3
Kasianowicz, J.J.4
Driven, D.N.5
-
15
-
-
18144387608
-
DNA in nanopores: Counterion condensation and coion depletion
-
Rabin, Y. & Tanaka, M. DNA in nanopores: counterion condensation and coion depletion. Phys. Rev. Lett. 94, 148103 (2005).
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 148103
-
-
Rabin, Y.1
Tanaka, M.2
-
16
-
-
33847273067
-
Effective charge and free energy of DNA inside an ioin channel
-
Zhang, J. & Shklovskii, B. I. Effective charge and free energy of DNA inside an ioin channel. Phys. Rev. E 75, 021906 (2007).
-
(2007)
Phys. Rev. e
, vol.75
, pp. 021906
-
-
Zhang, J.1
Shklovskii, B.I.2
-
17
-
-
24644451580
-
Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel
-
Mathé, J., Aksimentiev, A., Nelson, D. R., Schulten, K. & Meller, A. Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel. Proc. Natl Acad. Sci. USA 102, 12377-12382 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 12377-12382
-
-
Mathé, J.1
Aksimentiev, A.2
Nelson, D.R.3
Schulten, K.4
Meller, A.5
-
18
-
-
0026080578
-
Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates
-
Klemm, J. D., Wozniak, J. A., Albert, T. & Goldenberg, D. P. Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates. Biochemistry 30, 589-594 (1991).
-
(1991)
Biochemistry
, vol.30
, pp. 589-594
-
-
Klemm, J.D.1
Wozniak, J.A.2
Albert, T.3
Goldenberg, D.P.4
-
19
-
-
84860134831
-
Autotransporters: The cellular environment reshapes a folding mechanism to promote protein transport
-
Braselmann, E. & Clark, P. L. Autotransporters: the cellular environment reshapes a folding mechanism to promote protein transport. J. Phys. Chem. Lett. 3, 1063-1071 (2012).
-
(2012)
J. Phys. Chem. Lett.
, vol.3
, pp. 1063-1071
-
-
Braselmann, E.1
Clark, P.L.2
-
20
-
-
0028820703
-
Denaturant m values and heat capacity changes: Relation to changes in accessible surface areas of protein unfolding
-
Myers, J. K., Pace, C. N. & Scholtz, J. M. Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding. Protein Sci. 4, 2138-2148 (1995).
-
(1995)
Protein Sci.
, vol.4
, pp. 2138-2148
-
-
Myers, J.K.1
Pace, C.N.2
Scholtz, J.M.3
-
21
-
-
33748442685
-
Energetic and structural consequences of desolvation/solvation barriers to protein folding/unfolding assessed from experimental unfolding rates
-
Rodriguez-Larrea, D., Ibarra-Molero, B. & Sanchez-Ruiz, J. M. Energetic and structural consequences of desolvation/solvation barriers to protein folding/unfolding assessed from experimental unfolding rates. Biophys. J. 91, L48-L50 (2006).
-
(2006)
Biophys. J.
, vol.91
, pp. L48-L50
-
-
Rodriguez-Larrea, D.1
Ibarra-Molero, B.2
Sanchez-Ruiz, J.M.3
-
22
-
-
0033064934
-
Unraveling proteins: A molecular mechanics study
-
Rohs, R., Etchebest, C. & Lavery, R. Unraveling proteins: a molecular mechanics study. Biophys. J. 76, 2760-2768 (1999).
-
(1999)
Biophys. J.
, vol.76
, pp. 2760-2768
-
-
Rohs, R.1
Etchebest, C.2
Lavery, R.3
-
23
-
-
2442448427
-
The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques
-
Schlierf, M., Li, H. & Fernandez, J. M. The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques. Proc. Natl Acad. Sci. USA 101, 7299-7304 (2004).
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 7299-7304
-
-
Schlierf, M.1
Li, H.2
Fernandez, J.M.3
-
24
-
-
79955534260
-
ClpX(P) generates mechanical force to unfold and translocate its protein substrates
-
Mailllard, R. A. et al. ClpX(P) generates mechanical force to unfold and translocate its protein substrates. Cell 145, 459-469 (2011).
-
(2011)
Cell
, vol.145
, pp. 459-469
-
-
Mailllard, R.A.1
-
25
-
-
2942694473
-
The force exerted by the membrane potential during protein import into the mitochondrial matrix
-
Shariff, K., Ghosal, S. & Matouschek, A. The force exerted by the membrane potential during protein import into the mitochondrial matrix. Biophys. J. 86, 3647-3652 (2004).
-
(2004)
Biophys. J.
, vol.86
, pp. 3647-3652
-
-
Shariff, K.1
Ghosal, S.2
Matouschek, A.3
-
26
-
-
0030447720
-
Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore
-
Song, L. et al. Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore. Science 274, 1859-1866 (1996).
-
(1996)
Science
, vol.274
, pp. 1859-1866
-
-
Song, L.1
-
27
-
-
0029042511
-
Crystal structure of the 20S proteasome from the archaeon T. Acidophilum at 3.4 A resolution
-
Lowe, J. et al. Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution. Science 268, 579-582 (1995).
-
(1995)
Science
, vol.268
, pp. 579-582
-
-
Lowe, J.1
-
28
-
-
84923297105
-
Tom40 forms the hydrophilic channel of the mitochondrial import pore for preproteins
-
Hill, K. et al. Tom40 forms the hydrophilic channel of the mitochondrial import pore for preproteins. Nature 68, 542-552 (1998).
-
(1998)
Nature
, vol.68
, pp. 542-552
-
-
Hill, K.1
-
29
-
-
0032511189
-
The preprotein translocation channel of the outer membrane of mitochondria
-
Kunkele, K. P. et al. The preprotein translocation channel of the outer membrane of mitochondria. Cell 93, 1009-1019 (1998).
-
(1998)
Cell
, vol.93
, pp. 1009-1019
-
-
Kunkele, K.P.1
-
30
-
-
0032993061
-
A functional protein pore with a "retro" transmembrane domain
-
Cheley, S., Braha, O., Lu, X., Conlan, S. & Bayley, H. A functional protein pore with a "retro" transmembrane domain. Protein Sci. 8, 1257-1267 (1999).
-
(1999)
Protein Sci.
, vol.8
, pp. 1257-1267
-
-
Cheley, S.1
Braha, O.2
Lu, X.3
Conlan, S.4
Bayley, H.5
-
31
-
-
77954602645
-
Analysis of single nucleic acid molecules with protein nanopores
-
Maglia, G., Heron, A. J., Stoddart, D., Japrung, D. & Bayley, H. Analysis of single nucleic acid molecules with protein nanopores. Methods Enzymol. 475, 591-623 (2010).
-
(2010)
Methods Enzymol.
, vol.475
, pp. 591-623
-
-
Maglia, G.1
Heron, A.J.2
Stoddart, D.3
Japrung, D.4
Bayley, H.5
-
32
-
-
0034930381
-
Sequence-specific detection of individual DNA strands using engineered nanopores
-
Howorka, S., Cheley, S. & Bayley, H. Sequence-specific detection of individual DNA strands using engineered nanopores. Nat. Biotechnol. 19, 636-639 (2001).
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 636-639
-
-
Howorka, S.1
Cheley, S.2
Bayley, H.3
|