A Requirement for ERK-Dependent Dicer Phosphorylation in Coordinating Oocyte-to-Embryo Transition in C.elegans

Developmental Cell

Volumn 31, Issue 5, 2014, Pages 614-628

  Drake, Melanie ^a   Furuta, Tokiko ^a   Suen, Kin Man ^a,b   Gonzalez, Gabriel ^a,b   Liu, Bin ^a   Kalia, Awdhesh ^a   Ladbury, John E ^a,b   Fire, Andrew Z ^c   Skeath, James B ^d   Arur, Swathi ^a,b  

^a UNIVERSITY OF TEXAS MD ANDERSON CANCER CENTER   (United States)

^b UNIVERSITY OF TEXAS   (United States)

^c STANFORD UNIVERSITY   (United States)

^d WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DICER; DOUBLE STRANDED RNA; MITOGEN ACTIVATED PROTEIN KINASE; RIBONUCLEASE III;

ARTICLE; CAENORHABDITIS ELEGANS; DEVELOPMENT; FERTILIZATION; GERMLINE MICRONUCLEUS; MEIOSIS; NONHUMAN; OOCYTE DEVELOPMENT; OOCYTE TO EMBRYO TRANSITION; PHENOTYPE; PROTEIN LOCALIZATION; PROTEIN MODIFICATION; PROTEIN PHOSPHORYLATION; REGULATORY MECHANISM; TRANSGENE; ANIMAL; EMBRYOLOGY; ENZYMOLOGY; METABOLISM; MOUSE; NUCLEOTIDE SEQUENCE; OOCYTE; PHOSPHORYLATION; PHYSIOLOGY; SIGNAL TRANSDUCTION;

CAENORHABDITIS ELEGANS; MUS;

ANIMALS; BASE SEQUENCE; CAENORHABDITIS ELEGANS; MAP KINASE SIGNALING SYSTEM; MICE; OOCYTES; OOGENESIS; PHOSPHORYLATION; RIBONUCLEASE III; RNA, DOUBLE-STRANDED;

EID: 84918550070     PISSN: 15345807     EISSN: 18781551     Source Type: Journal    
DOI: 10.1016/j.devcel.2014.11.004     Document Type: Article

References (45)

1. Andl T., Murchison E.P., Liu F., Zhang Y., Yunta-Gonzalez M., Tobias J.W., Andl C.D., Seykora J.T., Hannon G.J., Millar S.E. The miRNA-processing enzyme dicer is essential for the morphogenesis and maintenance of hair follicles. Curr. Biol. 2006, 16:1041-1049.
2. Arur S., Ohmachi M., Nayak S., Hayes M., Miranda A., Hay A., Golden A., Schedl T. Multiple ERK substrates execute single biological processes in Caenorhabditis elegans germ-line development. Proc. Natl. Acad. Sci. USA 2009, 106:4776-4781.
3. Barbato C., Ciotti M.T., Serafino A., Calissano P., Cogoni C. Dicer expression and localization in post-mitotic neurons. Brain Res. 2007, 1175:17-27.
4. Barraud P., Emmerth S., Shimada Y., Hotz H.R., Allain F.H., Bühler M. An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer. EMBO J. 2011, 30:4223-4235.
5. Chang L., Karin M. Mammalian MAP kinase signalling cascades. Nature 2001, 410:37-40.
6. Church D.L., Guan K.L., Lambie E.J. Three genes of the MAP kinase cascade, mek-2, mpk-1/sur-1 and let-60 ras, are required for meiotic cell cycle progression in Caenorhabditis elegans. Development 1995, 121:2525-2535.
7. Denli A.M., Tops B.B., Plasterk R.H., Ketting R.F., Hannon G.J. Processing of primary microRNAs by the Microprocessor complex. Nature 2004, 432:231-235.
8. Emmerth S., Schober H., Gaidatzis D., Roloff T., Jacobeit K., Bühler M. Nuclear retention of fission yeast dicer is a prerequisite for RNAi-mediated heterochromatin assembly. Dev. Cell 2010, 18:102-113.
9. Fire A., Xu S., Montgomery M.K., Kostas S.A., Driver S.E., Mello C.C. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 1998, 391:806-811.
10. Flemr M., Malik R., Franke V., Nejepinska J., Sedlacek R., Vlahovicek K., Svoboda P. A retrotransposon-driven dicer isoform directs endogenous small interfering RNA production in mouse oocytes. Cell 2013, 155:807-816.
11. Frøkjaer-Jensen C., Davis M.W., Hopkins C.E., Newman B.J., Thummel J.M., Olesen S.P., Grunnet M., Jorgensen E.M. Single-copy insertion of transgenes in Caenorhabditis elegans. Nat. Genet. 2008, 40:1375-1383.
12. Gent J.I., Lamm A.T., Pavelec D.M., Maniar J.M., Parameswaran P., Tao L., Kennedy S., Fire A.Z. Distinct phases of siRNA synthesis in an endogenous RNAi pathway in C. elegans soma. Mol. Cell 2010, 37:679-689.
13. Govindan J.A., Nadarajan S., Kim S., Starich T.A., Greenstein D. Somatic cAMP signaling regulates MSP-dependent oocyte growth and meiotic maturation in C. elegans. Development 2009, 136:2211-2221.
14. Griffiths-Jones S., Saini H.K., van Dongen S., Enright A.J. miRBase: tools for microRNA genomics. Nucleic Acids Res. 2008, 36:D154-D158.
15. Grishok A., Pasquinelli A.E., Conte D., Li N., Parrish S., Ha I., Baillie D.L., Fire A., Ruvkun G., Mello C.C. Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing. Cell 2001, 106:23-34.
16. Han T., Manoharan A.P., Harkins T.T., Bouffard P., Fitzpatrick C., Chu D.S., Thierry-Mieg D., Thierry-Mieg J., Kim J.K. 26G endo-siRNAs regulate spermatogenic and zygotic gene expression in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 2009, 106:18674-18679.
17. Hubbard E.J., Greenstein D. The Caenorhabditis elegans gonad: a test tube for cell and developmental biology. Dev. Dyn. 2000, 218:2-22.
18. Kamminga L.M., van Wolfswinkel J.C., Luteijn M.J., Kaaij L.J., Bagijn M.P., Sapetschnig A., Miska E.A., Berezikov E., Ketting R.F. Differential impact of the HEN1 homolog HENN-1 on 21U and 26G RNAs in the germline of Caenorhabditis elegans. PLoS Genet. 2012, 8:e1002702.
19. Ketting R.F., Fischer S.E., Bernstein E., Sijen T., Hannon G.J., Plasterk R.H. Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes Dev. 2001, 15:2654-2659.
20. Knight S.W., Bass B.L. A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans. Science 2001, 293:2269-2271.
21. Lee Y., Jeon K., Lee J.T., Kim S., Kim V.N. MicroRNA maturation: stepwise processing and subcellular localization. EMBO J. 2002, 21:4663-4670.
22. Lee M.H., Ohmachi M., Arur S., Nayak S., Francis R., Church D., Lambie E., Schedl T. Multiple functions and dynamic activation of MPK-1 extracellular signal-regulated kinase signaling in Caenorhabditis elegans germline development. Genetics 2007, 177:2039-2062.
23. Lopez A.L., Chen J., Joo H.J., Drake M., Shidate M., Kseib C., Arur S. DAF-2 and ERK couple nutrient availability to meiotic progression during Caenorhabditis elegans oogenesis. Dev. Cell 2013, 27:227-240.
24. Merritt C., Rasoloson D., Ko D., Seydoux G. 3' UTRs are the primary regulators of gene expression in the C. elegans germline. Curr. Biol. 2008, 18:1476-1482.
25. Morse D.P., Aruscavage P.J., Bass B.L. RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA. Proc. Natl. Acad. Sci. 2002, 99:7906-7911.
26. Murchison E.P., Hannon G.J. miRNAs on the move: miRNA biogenesis and the RNAi machinery. Curr. Opin. Cell Biol. 2004, 16:223-229.
27. Murchison E.P., Stein P., Xuan Z., Pan H., Zhang M.Q., Schultz R.M., Hannon G.J. Critical roles for Dicer in the female germline. Genes Dev. 2007, 21:682-693.
28. Parker G.S., Maity T.S., Bass B.L. dsRNA binding properties of RDE-4 and TRBP reflect their distinct roles in RNAi. J.Mol. Biol. 2008, 384:967-979.
29. Praitis V., Casey E., Collar D., Austin J. Creation of low-copy integrated transgenic lines in Caenorhabditis elegans. Genetics 2001, 157:1217-1226.
30. Sijen T., Fleenor J., Simmer F., Thissen K.L., Parrish S., Timmons L., Plasterk R.H., Fire A. On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 2001, 107:465-476.
31. Sinkkonen L., Hugenschmidt T., Filipowicz W., Svoboda P. Dicer is associated with ribosomal DNA chromatin in mammalian cells. PLoS ONE 2010, 5:e12175.
32. Su Y.Q., Sugiura K., Woo Y., Wigglesworth K., Kamdar S., Affourtit J., Eppig J.J. Selective degradation of transcripts during meiotic maturation of mouse oocytes. Dev. Biol. 2007, 302:104-117.
33. Sundaram M.V. RTK/Ras/MAPK signaling. WormBook 2006, 1-19.
34. Tang F., Kaneda M., O'Carroll D., Hajkova P., Barton S.C., Sun Y.A., Lee C., Tarakhovsky A., Lao K., Surani M.A. Maternal microRNAs are essential for mouse zygotic development. Genes Dev. 2007, 21:644-648.
35. Tijsterman M., Plasterk R.H. Dicers at RISC; the mechanism of RNAi. Cell 2004, 117:1-3.
36. Verlhac M.H., de Pennart H., Maro B., Cobb M.H., Clarke H.J. MAP kinase becomes stably activated at metaphase and is associated with microtubule-organizing centers during meiotic maturation of mouse oocytes. Dev. Biol. 1993, 158:330-340.
37. Verlhac M.H., Kubiak J.Z., Weber M., Géraud G., Colledge W.H., Evans M.J., Maro B. Mos is required for MAP kinase activation and is involved in microtubule organization during meiotic maturation in the mouse. Development 1996, 122:815-822.
38. Verlhac M.H., Lefebvre C., Kubiak J.Z., Umbhauer M., Rassinier P., Colledge W., Maro B. Mos activates MAP kinase in mouse oocytes through two opposite pathways. EMBO J. 2000, 19:6065-6074.
39. Wang J., Czech B., Crunk A., Wallace A., Mitreva M., Hannon G.J., Davis R.E. Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles. Genome Res. 2011, 21:1462-1477.
40. Welker N.C., Pavelec D.M., Nix D.A., Duchaine T.F., Kennedy S., Bass B.L. Dicer's helicase domain is required for accumulation of some, but not all, C. elegans endogenous siRNAs. RNA 2010, 16:893-903.
41. Welker N.C., Maity T.S., Ye X., Aruscavage P.J., Krauchuk A.A., Liu Q., Bass B.L. Dicer's helicase domain discriminates dsRNA termini to promote an altered reaction mode. Mol. Cell 2011, 41:589-599.
42. Xia M., He H., Wang Y., Liu M., Zhou T., Lin M., Zhou Z., Huo R., Zhou Q., Sha J. PCBP1 is required for maintenance of the transcriptionally silent state in fully grown mouse oocytes. Cell Cycle 2012, 11:2833-2842.
43. Yochem J., Gu T., Han M. A new marker for mosaic analysis in Caenorhabditis elegans indicates a fusion between hyp6 and hyp7, two major components of the hypodermis. Genetics 1998, 149:1323-1334.
44. Zhang L., Ding L., Cheung T.H., Dong M.Q., Chen J., Sewell A.K., Liu X., Yates J.R., Han M. Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2. Mol. Cell 2007, 28:598-613.
45. Zuccotti M., Bellone M., Longo F., Redi C.A., Garagna S. Fully-mature antral mouse oocytes are transcriptionally silent but their heterochromatin maintains a transcriptional permissive histone acetylation profile. J.Assist. Reprod. Genet. 2011, 28:1193-1196.