-
1
-
-
79954997524
-
Rice proteomics: A move toward expanded proteome coverage to comparative and functional proteomics uncovers the mysteries of rice and plant biology
-
Agrawal GK and Rakwal R (2011) Rice proteomics: A move toward expanded proteome coverage to comparative and functional proteomics uncovers the mysteries of rice and plant biology. Proteomics 11:1630-1649.
-
(2011)
Proteomics
, vol.11
, pp. 1630-1649
-
-
Agrawal, G.K.1
Rakwal, R.2
-
2
-
-
33750584869
-
Rejuvenating rice proteomics: Facts, challenges, and visions
-
Agrawal GK, Jwa NS, Iwahashi Y, Yonekura M, Iwahashi H and Rakwal R (2006) Rejuvenating rice proteomics: Facts, challenges, and visions. Proteomics 6:5549-5576.
-
(2006)
Proteomics
, vol.6
, pp. 5549-5576
-
-
Agrawal, G.K.1
Jwa, N.S.2
Iwahashi, Y.3
Yonekura, M.4
Iwahashi, H.5
Rakwal, R.6
-
3
-
-
0006922663
-
Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana
-
Bevan M, Bancroft I, Bent E, Love K, Goodman H, Dean C, Bergkamp R, Dirkse W, Van Staveren M, Stiekema W, et al. (1998) Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 391:485- 488.
-
(1998)
Nature 391:485-
, pp. 488
-
-
Bevan, M.1
Bancroft, I.2
Bent, E.3
Love, K.4
Goodman, H.5
Dean, C.6
Bergkamp, R.7
Dirkse, W.8
Van Staveren, M.9
Stiekema, W.10
-
4
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM(1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
5
-
-
77956405590
-
Proteomic analysis of rice seedlings infected by Sinorhizobium meliloti 1021
-
Chi F, Yang P, Han F, Jing Y and Shen S (2010) Proteomic analysis of rice seedlings infected by Sinorhizobium meliloti 1021. Proteomics 10:1861-1874.
-
(2010)
Proteomics
, vol.10
, pp. 1861-1874
-
-
Chi, F.1
Yang, P.2
Han, F.3
Jing, Y.4
Shen, S.5
-
6
-
-
34249315763
-
Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza sativa) roots
-
Chitteti BR and Peng Z (2007) Proteome and phosphoproteome differential expression under salinity stress in rice (Oryza sativa) roots. J Proteome Res 6:1718-1727.
-
(2007)
J Proteome Res
, vol.6
, pp. 1718-1727
-
-
Chitteti, B.R.1
Peng, Z.2
-
7
-
-
84880103813
-
Use of proteomics to understand seed development in rice
-
ZY, Gong CY and Wang T (2013) Use of proteomics to understand seed development in rice. Proteomics 13:1784- 1800.
-
(2013)
Proteomics 13:1784-
, pp. 1800
-
-
Zy, G.C.1
Wang, T.2
-
8
-
-
84860326838
-
A proteomic approach to analyze nitrogen- and cytokininresponsive proteins in rice roots
-
Ding C, You J, Wang S, Liu Z, Li G, Wang Q and Ding Y (2012) A proteomic approach to analyze nitrogen- and cytokininresponsive proteins in rice roots. Mol Biol Rep 39:1617- 1626.
-
(2012)
Mol Biol Rep 39:1617-
, pp. 1626
-
-
Ding, C.1
You, J.2
Wang, S.3
Liu, Z.4
Li, G.5
Wang, Q.6
Ding, Y.7
-
9
-
-
79251598328
-
Proteomics analysis of rice seedling responses to ovine saliva
-
Fan W, Cui W, Li X, Chen S, Liu G and Shen S (2011) Proteomics analysis of rice seedling responses to ovine saliva. J Plant Physiol 168:500-509.
-
(2011)
J Plant Physiol
, vol.168
, pp. 500-509
-
-
Fan, W.1
Cui, W.2
Li, X.3
Chen, S.4
Liu, G.5
Shen, S.6
-
10
-
-
0031939209
-
Protein Disulfide Isomerases
-
Gilbert HF (1998) Protein Disulfide Isomerases. Methods Enzymol 290:26-50.
-
(1998)
Methods Enzymol
, vol.290
, pp. 26-50
-
-
Gilbert, H.F.1
-
11
-
-
79959759548
-
Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach
-
He D, Han C, Yao J, Shen S and Yang P (2011) Constructing the metabolic and regulatory pathways in germinating rice seeds through proteomic approach. Proteomics 11:2693-2713.
-
(2011)
Proteomics
, vol.11
, pp. 2693-2713
-
-
He, D.1
Han, C.2
Yao, J.3
Shen, S.4
Yang, P.5
-
12
-
-
36848998855
-
Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots
-
Jiang Y, Yang B, Harris NS and Deyholos MK (2007) Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. J Exp Bot 58:3591-3607.
-
(2007)
J Exp Bot
, vol.58
, pp. 3591-3607
-
-
Jiang, Y.1
Yang, B.2
Harris, N.S.3
Deyholos, M.K.4
-
13
-
-
20744446399
-
Structure, function, and formation of biological iron-sulfur clusters
-
Johnson DC, Dean DR, Smith AD and Johnson MK (2005) Structure, function, and formation of biological iron-sulfur clusters. Annu Rev Biochem 74:247-281.
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 247-281
-
-
Johnson, D.C.1
Dean, D.R.2
Smith, A.D.3
Johnson, M.K.4
-
14
-
-
77954303543
-
Characterization of agro-diversity by seed storage protein electrophoresis: Focus on rice germplasm from Uttarakhand Himalaya, India
-
Jugran A, Bhatt ID and Rawal RS (2010) Characterization of agro-diversity by seed storage protein electrophoresis: Focus on rice germplasm from Uttarakhand Himalaya, India. Rice Sci 17:122-128.
-
(2010)
Rice Sci
, vol.17
, pp. 122-128
-
-
Jugran, A.1
Bhatt, I.D.2
Rawal, R.S.3
-
15
-
-
0347755545
-
-
Komatsu S, Kojima K, Suzuki K, Ozaki K and Higo K (2004) Rice Proteome Database based on two-dimensional polyacrylamide gel electrophoresis: Its status in 2003.Nucleic Acids Res 32:D388-D392.
-
(2004)
Rice Proteome Database based on two-dimensional polyacrylamide gel electrophoresis: Its status in 2003.Nucleic Acids Res
, vol.32
, pp. D388-D392
-
-
Komatsu, S.1
Kojima, K.2
Suzuki, K.3
Ozaki, K.4
Higo, K.5
-
16
-
-
0029616214
-
Light-harvesting chlorophyll a/b-binding protein inserted into isolated thylakoids binds pigments and is assembled into trimeric lightharvesting complex
-
Kuttkat A, Grimm R and Paulsen H (1995) Light-harvesting chlorophyll a/b-binding protein inserted into isolated thylakoids binds pigments and is assembled into trimeric lightharvesting complex. Plant Physiol 109:1267-1276.
-
(1995)
Plant Physiol
, vol.109
, pp. 1267-1276
-
-
Kuttkat, A.1
Grimm, R.2
Paulsen, H.3
-
17
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680- 685.
-
(1970)
Nature 227:680-
, pp. 685
-
-
Laemmli, U.K.1
-
18
-
-
34250316177
-
SufE transfers sulfur from sufS to sufB for iron-sulfur cluster assembly
-
Layer G, Gaddam SA, Ayala-Castro CN, Ollagnier-de Choudens S, Lascoux D, Fontecave M and Outten FW (2007) SufE transfers sulfur from sufS to sufB for iron-sulfur cluster assembly. J Biol Chem 282:13342-13350.
-
(2007)
J Biol Chem
, vol.282
, pp. 13342-13350
-
-
Layer, G.1
Gaddam, S.A.2
Ayala-Castro, C.N.3
Ollagnier-De Choudens, S.4
Lascoux, D.5
Fontecave, M.6
Outten, F.W.7
-
19
-
-
0000087851
-
Genetic variation and indica-japonica differentiation in Yunnan indigenous rice
-
Liu K, Zhang Q, Zhang D and Xie Y (1995) Genetic variation and indica-japonica differentiation in Yunnan indigenous rice. Acta Bot Sin 37:718-724.
-
(1995)
Acta Bot Sin
, vol.37
, pp. 718-724
-
-
Liu, K.1
Zhang, Q.2
Zhang, D.3
Xie, Y.4
-
20
-
-
34547273106
-
RAPD-based genetic difference between indica rice and japonica rice
-
Long W and Xu M (2002) RAPD-based genetic difference between indica rice and japonica rice. J Yunnan Agric Univ 17:245-247.
-
(2002)
J Yunnan Agric Univ
, vol.17
, pp. 245-247
-
-
Long, W.1
Xu, M.2
-
21
-
-
70350618917
-
Efficient indica and japonica rice identification based on the InDel molecular method: Its implication in rice breeding and evolutionary research
-
Lu BR, Cai X and Xin J (2009) Efficient indica and japonica rice identification based on the InDel molecular method: Its implication in rice breeding and evolutionary research. Prog Nat Sci 19:1241-1252.
-
(2009)
Prog Nat Sci
, vol.19
, pp. 1241-1252
-
-
Lu, B.R.1
Cai, X.2
Xin, J.3
-
22
-
-
0036981948
-
Genetic differentiation of wild relatives of rice as assessed by RFLP analysis
-
Lu BR, Zheng K, QianHand Zhuang J (2002) Genetic differentiation of wild relatives of rice as assessed by RFLP analysis. Theor Appl Genet 106:101-106.
-
(2002)
Theor Appl Genet
, vol.106
, pp. 101-106
-
-
Lu, B.R.1
Zheng, K.2
Qianhand Zhuang, J.3
-
23
-
-
37349097323
-
Comparative proteomic and transcriptomic profiling of the human hepatocellular carcinoma
-
Minagawa H, Honda M, Miyazaki K, Tabuse Y, Teramoto R, Yamashita T, Nishino R, Takatori H, Ueda T, Kamijo K, et al. (2008) Comparative proteomic and transcriptomic profiling of the human hepatocellular carcinoma. Biochem Biophys Res Commun 366:186-192.
-
(2008)
Biochem Biophys Res Commun
, vol.366
, pp. 186-192
-
-
Minagawa, H.1
Honda, M.2
Miyazaki, K.3
Tabuse, Y.4
Teramoto, R.5
Yamashita, T.6
Nishino, R.7
Takatori, H.8
Ueda, T.9
Kamijo, K.10
-
25
-
-
79955456556
-
The effect of silicon on the leaf proteome of rice (Oryza sativa L.) plants under cadmiumstress
-
Nwugo CC and Huerta AJ (2011) The effect of silicon on the leaf proteome of rice (Oryza sativa L.) plants under cadmiumstress. J Proteome Res 10:518-528.
-
(2011)
J Proteome Res
, vol.10
, pp. 518-528
-
-
Nwugo, C.C.1
Huerta, A.J.2
-
26
-
-
0001505842
-
Rice varieties intermediate between wild and cultivated forms and the origin of the japonica type
-
Oka HI and Chang WT (1962) Rice varieties intermediate between wild and cultivated forms and the origin of the japonica type. Bot Bull Acad Sin 3:109-131.
-
(1962)
Bot Bull Acad Sin
, vol.3
, pp. 109-131
-
-
Oka, H.I.1
Chang, W.T.2
-
27
-
-
0034947535
-
Multifunctional _-enolase: Its role in diseases
-
Pancholi V (2001) Multifunctional _-enolase: Its role in diseases. Cell Mol Life Sci 58:902-920.
-
(2001)
Cell Mol Life Sci
, vol.58
, pp. 902-920
-
-
Pancholi, V.1
-
28
-
-
0001473562
-
Identification of specific proteins from seed embryos by two-dimensional gel electro-phoresis for the discrimination between indica and japonica rice
-
Saruyama H and Shinbashi N (1992) Identification of specific proteins from seed embryos by two-dimensional gel electro-phoresis for the discrimination between indica and japonica rice. Theor Appl Genet 84:947-951.
-
(1992)
Theor Appl Genet
, vol.84
, pp. 947-951
-
-
Saruyama, H.1
Shinbashi, N.2
-
29
-
-
0034013059
-
International Rice Genome Sequencing Project: The effort to completely sequence the rice genome
-
Sasaki T and Burr B (2000) International Rice Genome Sequencing Project: The effort to completely sequence the rice genome. Curr Opin Plant Biol 3:138-142.
-
(2000)
Curr Opin Plant Biol
, vol.3
, pp. 138-142
-
-
Sasaki, T.1
Burr, B.2
-
30
-
-
0037388680
-
Proteomics approach to identify wound-response related proteins from rice leaf sheath
-
Shen S, Jing Y and Kuang T (2003) Proteomics approach to identify wound-response related proteins from rice leaf sheath. Proteomics 3:527-535.
-
(2003)
Proteomics
, vol.3
, pp. 527-535
-
-
Shen, S.1
Jing, Y.2
Kuang, T.3
-
31
-
-
0036001081
-
Regulation and function of ascorbate peroxidase isoenzymes
-
Shigeoka S, Ishikawa T, Tamoi M, Miyagawa Y, Takeda T, Yabuta Y and Yoshimura K (2002) Regulation and function of ascorbate peroxidase isoenzymes. J Exp Bot 53:1305- 1319.
-
(2002)
J Exp Bot 53:1305-
, pp. 1319
-
-
Shigeoka, S.1
Ishikawa, T.2
Tamoi, M.3
Miyagawa, Y.4
Takeda, T.5
Yabuta, Y.6
Yoshimura, K.7
-
32
-
-
59449093938
-
A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency
-
Torabi S, Wissuwa M, Heidari M, Naghavi MR, Gilany K, Hajirezaei MR, Omidi M, Yazdi-Samadi B, Ismail AM and Salekdeh GH (2009) A comparative proteome approach to decipher the mechanism of rice adaptation to phosphorous deficiency. Proteomics 9:159-170.
-
(2009)
Proteomics
, vol.9
, pp. 159-170
-
-
Torabi, S.1
Wissuwa, M.2
Heidari, M.3
Naghavi, M.R.4
Gilany, K.5
Hajirezaei, M.R.6
Omidi, M.7
Yazdi-Samadi, B.8
Ismail, A.M.9
Salekdeh, G.H.10
-
33
-
-
39749148897
-
The evolving story of rice evolution
-
Vaughan DA, Lu BR and Tomooka N (2008) The evolving story of rice evolution. Plant Sci 174:394-408.
-
(2008)
Plant Sci
, vol.174
, pp. 394-408
-
-
Vaughan, D.A.1
Lu, B.R.2
Tomooka, N.3
-
34
-
-
43249089814
-
DingDand WangY(2006) Genome polymorphisms between indica and japonica revealed by RFLP
-
Wang S, Liu X, Xu C, Shi L, Zhang X, DingDand WangY(2006) Genome polymorphisms between indica and japonica revealed by RFLP. Sci Agric Sin 39:1038-1043.
-
Sci Agric Sin
, vol.39
, pp. 1038-1043
-
-
Wang, S.1
Liu, X.2
Xu, C.3
Shi, L.4
Zhang, X.5
-
35
-
-
34548078497
-
Determination and classification of subspecies of Asian rice and their inter-subspecies hybrids
-
Wang X and Li R (1997) Determination and classification of subspecies of Asian rice and their inter-subspecies hybrids. Chin Sci Bull 42:2596-2603.
-
(1997)
Chin Sci Bull
, vol.42
, pp. 2596-2603
-
-
Wang, X.1
Li, R.2
-
36
-
-
84873373465
-
Comparative proteomics analysis of selenium responses in seleniumenriched rice grains
-
Wang YD, Wang X, Ngai SM and Wong YS (2013) Comparative proteomics analysis of selenium responses in seleniumenriched rice grains. J Proteome Res 12:808-820.
-
(2013)
J Proteome Res
, vol.12
, pp. 808-820
-
-
Wang, Y.D.1
Wang, X.2
Ngai, S.M.3
Wong, Y.S.4
-
37
-
-
0026724558
-
Harpin, elicitor of the hypersensitive response produced by the plant pathogen Erwinia amylovora
-
Wei ZM, Laby RJ, Zumoff CH, Bauer DW, He SY, Collmer A and Beer SV (1992) Harpin, elicitor of the hypersensitive response produced by the plant pathogen Erwinia amylovora. Science 257:85-88.
-
(1992)
Science
, vol.257
, pp. 85-88
-
-
Wei, Z.M.1
Laby, R.J.2
Zumoff, C.H.3
Bauer, D.W.4
He, S.Y.5
Collmer, A.6
Beer, S.V.7
-
39
-
-
33645472456
-
Comparative proteomic analysis provides new insights into chilling stress responses in rice
-
Yan SP, Zhang QY, Tang ZC, Su WA and Sun WN (2006) Comparative proteomic analysis provides new insights into chilling stress responses in rice. Mol Cell Proteomics 5:484-496.
-
(2006)
Mol Cell Proteomics
, vol.5
, pp. 484-496
-
-
Yan, S.P.1
Zhang, Q.Y.2
Tang, Z.C.3
Su, W.A.4
Sun, W.N.5
-
40
-
-
33745087483
-
Proteome analysis of rice uppermost internodes at the milky stage
-
Yang P, Liang Y, Shen S and Kuang T (2006) Proteome analysis of rice uppermost internodes at the milky stage. Proteomics 6:3330-3338.
-
(2006)
Proteomics
, vol.6
, pp. 3330-3338
-
-
Yang, P.1
Liang, Y.2
Shen, S.3
Kuang, T.4
-
41
-
-
34547288195
-
Proteomic analysis of de-etiolated rice seedlings upon exposure to light
-
Yang P, Chen H, Liang Y and Shen S (2007a) Proteomic analysis of de-etiolated rice seedlings upon exposure to light. Proteomics 7:2459-2468.
-
(2007)
Proteomics
, vol.7
, pp. 2459-2468
-
-
Yang, P.1
Chen, H.2
Liang, Y.3
Shen, S.4
-
42
-
-
34948864529
-
Proteomic analysis of rice (Oryza sativa) seeds during germination
-
Yang P, Li X, Wang X, Chen H, Chen F and Shen S (2007b) Proteomic analysis of rice (Oryza sativa) seeds during germination. Proteomics 7:3358-3368.
-
(2007)
Proteomics
, vol.7
, pp. 3358-3368
-
-
Yang, P.1
Li, X.2
Wang, X.3
Chen, H.4
Chen, F.5
Shen, S.6
-
43
-
-
84870485266
-
Improvement of two-dimensional electrophoresis of rice (Oryza sativa L.) proteomics
-
Yang Y, Cui W, Liu X, ZhuKand ChenK (2012) Improvement of two-dimensional electrophoresis of rice (Oryza sativa L.) proteomics. Chin J Appl Environ Biol 18:819-823.
-
(2012)
Chin J Appl Environ Biol
, vol.18
, pp. 819-823
-
-
Yang, Y.1
Cui, W.2
Liu, X.3
Zhukand, C.4
-
44
-
-
33747846582
-
WEGO: A web tool for plotting GO annotations
-
Ye J, Fang L, Zheng H, Zhang Y, Chen J, Zhang Z, Wang J, Li S, Li R and Bolund L (2006) WEGO: A web tool for plotting GO annotations. Nucleic Acids Res 34:W293-297.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W293-297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
Wang, J.7
Li, S.8
Li, R.9
Bolund, L.10
-
45
-
-
17844393391
-
Estimating genetic diversity of rice landraces from Yunnan by SSR assay and its implication for conservation
-
Zhu MY, Wang YY, Zhu YY and Lu BR (2004) Estimating genetic diversity of rice landraces from Yunnan by SSR assay and its implication for conservation. Acta Bot Sin 46:1458- 1467.
-
(2004)
Acta Bot Sin 46:1458-
, pp. 1467
-
-
Zhu, M.Y.1
Wang, Y.Y.2
Zhu, Y.Y.3
Lu, B.R.4
|