Detection of nosema bombycis by fta cards and loop-mediated isothermal amplification (lamp)

Current Microbiology

Volumn 69, Issue 4, 2014, Pages 532-540

  Yan, Wei ^a   Shen, Zhongyuan ^a,b,c   Tang, Xudong ^a,b   Xu, Li ^a,b   Li, Qianlong ^a,b   Yue, Yajie ^a,b   Xiao, Shengyan ^a,b   Fu, Xuliang ^a  

^a JIANGSU UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

^c Key Laboratory of Genetic Improvement of Silkworm and Mulberry of Agricultural Ministry   (China)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; GLASS; LARGE SUBUNIT RIBOSOMAL RNA; FUNGAL DNA; PRIMER DNA;

ANALYZER; ARTICLE; BOMBYX MORI; CONTROLLED STUDY; DNA EXTRACTION; DNA PURIFICATION; EARLY DIAGNOSIS; FTA CARD; FUNGAL DETECTION; FUNGAL SPORE GERMINATION; FUNGUS SPORE; GENE AMPLIFICATION; LARVA; LOOP MEDIATED ISOTHERMAL AMPLIFICATION; NONHUMAN; NOSEMA BOMBYCIS; PEBRINE; PRIORITY JOURNAL; ANIMAL; BOMBYX; CHEMICAL ANALYSIS; CLASSIFICATION; DEVICES; EVALUATION STUDY; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MICROBIOLOGY; NOSEMA; NUCLEIC ACID AMPLIFICATION; PROCEDURES;

BOMBYX MORI; NOSEMA BOMBYCIS;

ANIMALS; BOMBYX; CHEMISTRY TECHNIQUES, ANALYTICAL; DNA PRIMERS; DNA, FUNGAL; NOSEMA; NUCLEIC ACID AMPLIFICATION TECHNIQUES; SPORES, FUNGAL;

EID: 84911882746     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-014-0619-3     Document Type: Article

References (34)

1. Bing YY, Sun XH, An CL (2005) Biology and experimental detection of microsporidia. Parasit Dis Foreign Med Sci 32:166–169
2. Cai SF, He XY, He XK et al (2011) A protocol for fast and efficient preparation of genomic DNA and total proteins of Nosema bombycis. Sci Seric 37:1019–1024
3. Didier ES, Vossbrinck CR, Baker MD et al (1995) Identification and characterization of three Encephalitozoon cuniculi strains. Parasitology 111:411–421
4. Ellington A (1998) Preparation and analysis of DNA. In: Ausubel FM, Brent R, Kingston RE (eds) Short protocols in molecular biology. China Scientific Press, Beijing, pp 29–71
5. Guo LD, Hyde KD, Liew EC (2001) Detection and taxonomic placement of endophytic fungi within frond tissues of Livistona chinensis based on rDNA sequences. Mol Phylogenet Evol 20:1–13
6. Hamiduzzaman MM, Guzman-Novoa E, Goodwin PH (2010) A multiplex PCR assay to diagnose and quantify Nosema infections in honey bees (Apis mellifera). J Invertebr Pathol 105:151–155
7. Hatakeyama Y, Hayasaka S (2003) A new method of pebrine inspection of silkworm egg using multiprimer PCR. J Invertebr Pathol 82:148–151
8. Huang SK, Lu XM, Wang FW et al (2004) Comparative study on spore surface proteins of two microsporidia and their infectivity to silkworm Bombyx mori. Sci Seric 30:157–162
9. Huang WF, Tsai SJ, Lo CF et al (2004) The novel organization and complete sequence of the ribosomal RNA gene of Nosema bombycis. Fungal Genet Biol 41:473–481
10. Jiang KY, Zhu Y, Liu WX et al (2012) Development of a loop-mediated isothermal amplification (LAMP) for the detection of F5 Fimbriae gene in Enterotoxigenic Escherichia coli (ETEC). Curr Microbiol 65:633–638
11. Keeler SP, Ferro PJ, Brown JD et al (2012) Use of FTA sampling cards for molecular detection of avian influenza virus in wild birds. Avian Dis 56:200–207
12. Kokoskin E, Gyorkos TW, Camus A et al (1994) Modified technique for efficient detection of microsporidia. J Clin Micro-biol 32:1074–1075
13. Liu JP, Cao Y, Smith JE (2004) Studies on the application of PCR molecular diagnosis to silkworms with simulated pebrine disease. Sci Agric Sin 37:1925–1931
14. Liu JP, Cao Y, Smith JE (2004) Studies on the application of PCR molecular diagnosis to silkworms eggs and moth with simulated pebrine disease. Sci Agric Sin 30:367–370
15. Lee SH, Joung M, Yoon S et al (2010) Multiplex PCR detection of waterborne intestinal protozoa: microsporidia, Cyclospora, and Cryptosporidium. Korean J Parasitol 48:297–301
16. Liu HD, Pan GQ, Song SH et al (2008) Multiple rDNA units distributed on all chromosomes of Nosema bombycis. J Invertebr Pathol 99:235–238
17. Maikai BV, Umoh JU, Lawal IA et al (2012) Molecular characterizations of Cryptosporidium, Giardia, and Enterocytozoon in humans in Kaduna State, Nigeria. Exp Parasitol 131:452–456
18. Njiru ZK, Mikosza AS, Armstrong T et al (2008) Loop-mediated isothermal amplification (LAMP) method for rapid detection of Trypanosoma brucei rhodesiense. PLoS Negl Trop Dis 2:e147
19. Notomi T, Okayama H, Masubuchi H et al (2000) Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 28:e63
20. Orlandi PA, Lampel KA (2000) Extraction-free, filter-based template preparation for rapid and sensitive PCR detection of pathogenic parasitic protozoa. J Clin Microbiol 38:2271–2277
21. Pan ZH, Gong CL, Zheng XJ et al (2007) Study on the detection sensitivity of PCR method for silkworm Nosema bombycis DNA. J Chang Inst Technol 21:51–54
22. Pan MH, Wan YC, Lu C (2001) Studies on the methods for preparing DNA of different species of microsporidia. J Southwest Agric Univ 23(111–112):116
23. Pan ZH, Zheng XJ, Xue ZY et al (2005) The method for extraction of Nosema bombycis DNA from silkworm eggs with pebrine. Sci Seric 31:486–489
24. Raynaud L, Delbac F, Broussolle V et al (1998) Identification of Encephalitozoon intestinalis in travelers with chronic diarrhea by specific PCR amplification. J Clin Microbiol 36:37–40
25. Sorel N, Guillot E, Thellier M et al (2003) Development of an immunomagnetic separation–polymerase chain reaction (IMS– PCR) assay specific for Enterocytozoon bieneusi in water samples. J Appl Microbiol 94:273–279
26. Sanders JL, Kent ML (2011) Development of a sensitive assay for the detection of Pseudoloma neurophilia in laboratory populations of the zebrafish Danio rerio. Dis Aquat Org 96:145–156
27. Singh P, Mirdha BR, Ahuja V et al (2013) Loop-mediated isothermal amplification (LAMP) assay for rapid detection of Ent-amoeba histolytica in amoebic liver abscess. World J Microbiol Biotechnol 29:27–32
28. Subrungruang I, Mungthin M, Chavalitshewinkoon-Petmitr P et al (2004) Evaluation of DNA extraction and PCR methods for detection of Enterocytozoon bieneusi in stool specimens. J Clin Microbiol 42:3490–3494
29. Stine SW, Vladich FD, Pepper IL et al (2005) Development of a method for the concentration and recovery of microsporidia from tap water. J Environ Sci Health 40:913–925
30. Taniuchi M, Verweij JJ, Sethabutr O et al (2011) Multiplex polymerase chain reaction method to detect Cyclospora, Cysto-isospora, and Microsporidia in stool samples. Diagn Microbiol Infect Dis 71:386–390
31. Widmer G, Akiyoshi DE (2010) Host-specific segregation of ribosomal nucleotide sequence diversity in the microsporidian Enterocytozoon bieneusi. Infect Genet Evol 10:122–128
32. Wolk DM, Schneider SK, Wengenack NL et al (2002) Real-time PCR method for detection of Encephalitozoon intestinalis from stool specimens. J Clin Microbiol 40:3922–3928
33. Xu YJ, Takvorian P, Cali A et al (2006) Identification of a new spore wall protein from Encephalitozoon cuniculi. Infect Immun 74:239–247
34. Zhang FY, Shi YH, Jiang K et al (2012) Sensitive and rapid detection of two toxic microalgae Alexandrium by loop-mediated isothermal amplification. Acta Oceanol Sin 31:139–146