메뉴 건너뛰기




Volumn 10, Issue , 2015, Pages 1-6

Emerging viruses: Why they are not jacks of all trades?

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DNA VIRUS; EPISTASIS; GENETIC VARIABILITY; HUMAN; NONHUMAN; PLEIOTROPY; RNA VIRUS; VIRAL GENETICS; VIRUS; VIRUS MUTATION; ADAPTATION; ANIMAL; BIOLOGICAL MODEL; COMMUNICABLE DISEASE; EVOLUTION; GENETICS; MUTATION; PLANT; REPRODUCTIVE FITNESS; VIRAL PHENOMENA AND FUNCTIONS; VIROLOGY; VIRUS INFECTION;

EID: 84911425694     PISSN: 18796257     EISSN: 18796265     Source Type: Journal    
DOI: 10.1016/j.coviro.2014.10.006     Document Type: Review
Times cited : (45)

References (53)
  • 1
    • 17844365567 scopus 로고    scopus 로고
    • Emerging pathogens: The epidemiology and evolution of species jumps
    • Woolhouse ME, Haydon DT, Antia R: Emerging pathogens: the epidemiology and evolution of species jumps. Trends Ecol Evol 2005, 20:238-244.
    • (2005) Trends Ecol Evol , vol.20 , pp. 238-244
    • Woolhouse, M.E.1    Haydon, D.T.2    Antia, R.3
  • 3
    • 70349327691 scopus 로고    scopus 로고
    • Bacteriophages as model organisms for virus emergence research
    • Dennehy JJ: Bacteriophages as model organisms for virus emergence research. Trends Microbiol 2009, 17:450-457.
    • (2009) Trends Microbiol , vol.17 , pp. 450-457
    • Dennehy, J.J.1
  • 4
    • 84890435377 scopus 로고    scopus 로고
    • Plant RNA virus fitness predictability: Contribution of genetic and environmental factors
    • Elena SF, Lalic J: Plant RNA virus fitness predictability: contribution of genetic and environmental factors. Plant Pathol 2013, 62S1:10-18.
    • (2013) Plant Pathol , vol.62 S1 , pp. 10-18
    • Elena, S.F.1    Lalic, J.2
  • 5
    • 77951692453 scopus 로고    scopus 로고
    • The evolutionary genetics of emerging viruses
    • Holmes EC: The evolutionary genetics of emerging viruses. Annu Rev Ecol Evol Syst 2009, 40:353-372.
    • (2009) Annu Rev Ecol Evol Syst , vol.40 , pp. 353-372
    • Holmes, E.C.1
  • 7
    • 34250749323 scopus 로고    scopus 로고
    • High frequency of mutations that expand the host range of an RNA virus
    • Ferris MT, Joyce P, Burch CL: High frequency of mutations that expand the host range of an RNA virus. Genetics 2007, 176:1013-1022.
    • (2007) Genetics , vol.176 , pp. 1013-1022
    • Ferris, M.T.1    Joyce, P.2    Burch, C.L.3
  • 8
    • 33644781708 scopus 로고    scopus 로고
    • Pleiotropic costs of niche expansion in the RNA bacteriophage phi 6
    • Duffy S, Turner PE, Burch CL: Pleiotropic costs of niche expansion in the RNA bacteriophage phi 6. Genetics 2006, 172:751-757.
    • (2006) Genetics , vol.172 , pp. 751-757
    • Duffy, S.1    Turner, P.E.2    Burch, C.L.3
  • 14
    • 84869139621 scopus 로고    scopus 로고
    • Understanding specialism when the Jack of all trades can be the master of all
    • Remold S: Understanding specialism when the Jack of all trades can be the master of all. Proc R Soc B 2012, 279:4861-4869.
    • (2012) Proc R Soc B , vol.279 , pp. 4861-4869
    • Remold, S.1
  • 15
    • 0025682608 scopus 로고
    • Ecological genetics and host adaptation in herbivorous insects: The experimental study of evolution in natural and agricultural systems
    • Via S: Ecological genetics and host adaptation in herbivorous insects: the experimental study of evolution in natural and agricultural systems. Annu Rev Entomol 1990, 35:421-446.
    • (1990) Annu Rev Entomol , vol.35 , pp. 421-446
    • Via, S.1
  • 16
    • 0028321230 scopus 로고
    • Accumulation of deleterious mutations and the evolutionary cost of being generalist
    • Kawecki TJ: Accumulation of deleterious mutations and the evolutionary cost of being generalist. Am Nat 1994, 144:833-838.
    • (1994) Am Nat , vol.144 , pp. 833-838
    • Kawecki, T.J.1
  • 17
    • 0034535109 scopus 로고    scopus 로고
    • Cost of host radiation in an RNA virus
    • Turner PE, Elena SF: Cost of host radiation in an RNA virus. Genetics 2000, 156 :1465-1470.
    • (2000) Genetics , vol.156 , pp. 1465-1470
    • Turner, P.E.1    Elena, S.F.2
  • 19
    • 55549141149 scopus 로고    scopus 로고
    • The pleiotropic cost of host-specialization in Tobacco etch potyvirus
    • Agudelo-Romero P, de la Iglesia F, Elena SF: The pleiotropic cost of host-specialization in Tobacco etch potyvirus. Infect Genet Evol 2008, 8:806-814.
    • (2008) Infect Genet Evol , vol.8 , pp. 806-814
    • Agudelo-Romero, P.1    De La Iglesia, F.2    Elena, S.F.3
  • 21
    • 67650915053 scopus 로고    scopus 로고
    • Mosquitoes put the brake on arbovirus evolution: Experimental evolution reveals slower mutation accumulation in mosquito than vertebrate cells
    • Vasilakis N, Deardorff ER, Kenney JL, Rossi SL, Hanley KA, Weaver SC: Mosquitoes put the brake on arbovirus evolution: experimental evolution reveals slower mutation accumulation in mosquito than vertebrate cells. PLoS Pathog 2009, 5:e1000467.
    • (2009) PLoS Pathog , vol.5 , pp. e1000467
    • Vasilakis, N.1    Deardorff, E.R.2    Kenney, J.L.3    Rossi, S.L.4    Hanley, K.A.5    Weaver, S.C.6
  • 23
    • 0032924195 scopus 로고    scopus 로고
    • Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells
    • Weaver SC, Brault AC, Kang W, Holland JJ: Genetic and fitness changes accompanying adaptation of an arbovirus to vertebrate and invertebrate cells. J Virol 1999, 73:4316-4326.
    • (1999) J Virol , vol.73 , pp. 4316-4326
    • Weaver, S.C.1    Brault, A.C.2    Kang, W.3    Holland, J.J.4
  • 24
    • 84862843329 scopus 로고    scopus 로고
    • Multihost experimental evolution of a plant RNA virus reveals local adaptation and host-specific mutations
    • Bedhomme S, Lafforgue G, Elena SF: Multihost experimental evolution of a plant RNA virus reveals local adaptation and host-specific mutations. Mol Biol Evol 2012, 29:1481-1492.
    • (2012) Mol Biol Evol , vol.29 , pp. 1481-1492
    • Bedhomme, S.1    Lafforgue, G.2    Elena, S.F.3
  • 25
    • 84907984350 scopus 로고    scopus 로고
    • Experimental evolution of an emerging plant virus in host genotypes that differ in their susceptibility to infection
    • Hillung J, Cuevas JM, Valverde S, Elena SF: Experimental evolution of an emerging plant virus in host genotypes that differ in their susceptibility to infection. Evolution 2014, 68:2467-2480.
    • (2014) Evolution , vol.68 , pp. 2467-2480
    • Hillung, J.1    Cuevas, J.M.2    Valverde, S.3    Elena, S.F.4
  • 26
    • 81755177852 scopus 로고    scopus 로고
    • Effect of host species on the distribution of mutational fitness effects for an RNA virus
    • Lalic J, Cuevas JM, Elena SF: Effect of host species on the distribution of mutational fitness effects for an RNA virus. PLoS Genet 2011, 7:e1002378.
    • (2011) PLoS Genet , vol.7 , pp. e1002378
    • Lalic, J.1    Cuevas, J.M.2    Elena, S.F.3
  • 27
    • 0033515583 scopus 로고    scopus 로고
    • Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells
    • Novella IS, Hershey CL, Escarmis C, Domingo E, Holland JJ: Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells. J Mol Biol 1999, 287:459-465.
    • (1999) J Mol Biol , vol.287 , pp. 459-465
    • Novella, I.S.1    Hershey, C.L.2    Escarmis, C.3    Domingo, E.4    Holland, J.J.5
  • 28
    • 0035047929 scopus 로고    scopus 로고
    • Differential evolution of eastern equine encephalitis virus populations in response to host cell type
    • Cooper LA, Scott TW: Differential evolution of eastern equine encephalitis virus populations in response to host cell type. Genetics 2001, 157:1403-1412.
    • (2001) Genetics , vol.157 , pp. 1403-1412
    • Cooper, L.A.1    Scott, T.W.2
  • 29
    • 27644543076 scopus 로고    scopus 로고
    • Effect of alternating passage on adaptation of sindbis virus to vertebrate and invertebrate cells
    • Greene IP, Wang E, Deardorff ER, Milleron R, Domingo E, Weaver SC: Effect of alternating passage on adaptation of sindbis virus to vertebrate and invertebrate cells. J Virol 2005, 79:14253-14260.
    • (2005) J Virol , vol.79 , pp. 14253-14260
    • Greene, I.P.1    Wang, E.2    Deardorff, E.R.3    Milleron, R.4    Domingo, E.5    Weaver, S.C.6
  • 30
    • 78650670077 scopus 로고    scopus 로고
    • Host alternation of chikungunya virus increases fitness while restricting population diversity and adaptability to novel selective pressures
    • Coffey LL, Vignuzzi M: Host alternation of chikungunya virus increases fitness while restricting population diversity and adaptability to novel selective pressures. J Virol 2011, 85:1025-1035.
    • (2011) J Virol , vol.85 , pp. 1025-1035
    • Coffey, L.L.1    Vignuzzi, M.2
  • 31
    • 44649151205 scopus 로고    scopus 로고
    • Evolutionary genomics of host adaptation in vesicular stomatitis virus
    • Remold SK, Rambaut A, Turner PE: Evolutionary genomics of host adaptation in vesicular stomatitis virus. Mol Biol Evol 2008, 25:1138-1147.
    • (2008) Mol Biol Evol , vol.25 , pp. 1138-1147
    • Remold, S.K.1    Rambaut, A.2    Turner, P.E.3
  • 33
    • 78650592680 scopus 로고    scopus 로고
    • Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes
    • Poelwijk FJ, Tanase-Nicola S, Kiviet DJ, Tans SJ: Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes. J Theor Biol 2011, 272:141-144.
    • (2011) J Theor Biol , vol.272 , pp. 141-144
    • Poelwijk, F.J.1    Tanase-Nicola, S.2    Kiviet, D.J.3    Tans, S.J.4
  • 34
    • 32544444570 scopus 로고    scopus 로고
    • The rank ordering of genotypic fitness values predicts genetic constraint on natural selection on landscapes lacking sign epistasis
    • Weinreich DM: The rank ordering of genotypic fitness values predicts genetic constraint on natural selection on landscapes lacking sign epistasis. Genetics 2005, 171:1397-1405.
    • (2005) Genetics , vol.171 , pp. 1397-1405
    • Weinreich, D.M.1
  • 35
    • 15244359422 scopus 로고    scopus 로고
    • The nk model and population genetics
    • Welch JJ, Waxman D: The nk model and population genetics. J Theor Biol 2005, 234:329-340.
    • (2005) J Theor Biol , vol.234 , pp. 329-340
    • Welch, J.J.1    Waxman, D.2
  • 37
    • 34248364854 scopus 로고    scopus 로고
    • Epistasis between deleterious mutations and the evolution of recombination
    • Kouyos RD, Silander OK, Bonhoeffer S: Epistasis between deleterious mutations and the evolution of recombination. Trends Ecol Evol 2007, 22:308-315.
    • (2007) Trends Ecol Evol , vol.22 , pp. 308-315
    • Kouyos, R.D.1    Silander, O.K.2    Bonhoeffer, S.3
  • 38
    • 84924919448 scopus 로고    scopus 로고
    • Simple genomes, complex interactions: Epistasis in RNA virus
    • Elena SF, Sole RV, Sardanyes J: Simple genomes, complex interactions: epistasis in RNA virus. Chaos 2010, 20:026106.
    • (2010) Chaos , vol.20 , pp. 026106
    • Elena, S.F.1    Sole, R.V.2    Sardanyes, J.3
  • 39
    • 84872201708 scopus 로고    scopus 로고
    • Evolution at increased error rate leads to the coexistence of multiple adaptive pathways in an RNA virus
    • Cabanillas L, Arribas M, Lazaro E: Evolution at increased error rate leads to the coexistence of multiple adaptive pathways in an RNA virus. BMC Evol Biol 2013, 13:11.
    • (2013) BMC Evol Biol , vol.13 , pp. 11
    • Cabanillas, L.1    Arribas, M.2    Lazaro, E.3
  • 41
    • 79952270576 scopus 로고    scopus 로고
    • Prevalence of epistasis in the evolution of influenza A surface proteins
    • Kryazhimskiy S, Dushoff J, Bazykin GA, Plotkin JB: Prevalence of epistasis in the evolution of influenza A surface proteins. PLoS Genet 2011, 7:e1001301.
    • (2011) PLoS Genet , vol.7 , pp. e1001301
    • Kryazhimskiy, S.1    Dushoff, J.2    Bazykin, G.A.3    Plotkin, J.B.4
  • 42
    • 77956641491 scopus 로고    scopus 로고
    • Fitness epistasis and constraints on adaptation in a human immunodeficiency virus type 1 protein region
    • da Silva J, Coetzer M, Nedellec R, Pastore C, Mosier DE: Fitness epistasis and constraints on adaptation in a human immunodeficiency virus type 1 protein region. Genetics 2010, 185:293-303.
    • (2010) Genetics , vol.185 , pp. 293-303
    • Da Silva, J.1    Coetzer, M.2    Nedellec, R.3    Pastore, C.4    Mosier, D.E.5
  • 43
    • 84864290431 scopus 로고    scopus 로고
    • Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus
    • Lalic J, Elena SF: Magnitude and sign epistasis among deleterious mutations in a positive-sense plant RNA virus. Heredity 2012, 109:71-77.
    • (2012) Heredity , vol.109 , pp. 71-77
    • Lalic, J.1    Elena, S.F.2
  • 45
    • 80055108515 scopus 로고    scopus 로고
    • Genetic background matters: A plant-virus gene-for-gene interaction is strongly influenced by genetic contexts
    • Montarry J, Doumayrou J, Simon V, Moury B: Genetic background matters: a plant-virus gene-for-gene interaction is strongly influenced by genetic contexts. Mol Plant Pathol 2011, 12:911-920.
    • (2011) Mol Plant Pathol , vol.12 , pp. 911-920
    • Montarry, J.1    Doumayrou, J.2    Simon, V.3    Moury, B.4
  • 46
    • 84873977937 scopus 로고    scopus 로고
    • Genotypic but not phenotypic historical contingency revealed by viral experimental evolution
    • Bedhomme S, Lafforgue G, Elena SF: Genotypic but not phenotypic historical contingency revealed by viral experimental evolution. BMC Evol Biol 2013, 13:46.
    • (2013) BMC Evol Biol , vol.13 , pp. 46
    • Bedhomme, S.1    Lafforgue, G.2    Elena, S.F.3
  • 47
    • 77249162159 scopus 로고    scopus 로고
    • Compensatory molecular evolution of HC-Pro, an RNA-silencing suppressor from a plant RNA virus
    • Torres-Barcelo C, Daros JA, Elena SF: Compensatory molecular evolution of HC-Pro, an RNA-silencing suppressor from a plant RNA virus. Mol Biol Evol 2010, 27:543-551.
    • (2010) Mol Biol Evol , vol.27 , pp. 543-551
    • Torres-Barcelo, C.1    Daros, J.A.2    Elena, S.F.3
  • 48
    • 84872029541 scopus 로고    scopus 로고
    • Epistasis between mutations is host-dependent for an RNA virus
    • Lalic J, Elena SF: Epistasis between mutations is host-dependent for an RNA virus. Biol Lett 2013, 9:20120396.
    • (2013) Biol Lett , vol.9 , pp. 20120396
    • Lalic, J.1    Elena, S.F.2
  • 50
    • 84870932702 scopus 로고    scopus 로고
    • Replication of West Nile virus, Rabensburg lineage in mammalian cells is restricted by temperature
    • Aliota MT, Kramer LD: Replication of West Nile virus, Rabensburg lineage in mammalian cells is restricted by temperature. Parasit Vectors 2012, 5:293.
    • (2012) Parasit Vectors , vol.5 , pp. 293
    • Aliota, M.T.1    Kramer, L.D.2
  • 51
    • 58149316446 scopus 로고    scopus 로고
    • Impact of climate change and other factors on emerging arbovirus diseases
    • Gould EA, Higgs S: Impact of climate change and other factors on emerging arbovirus diseases. Trans R Soc Trop Med Hyg 2009, 103:109-121.
    • (2009) Trans R Soc Trop Med Hyg , vol.103 , pp. 109-121
    • Gould, E.A.1    Higgs, S.2
  • 52
    • 84906688865 scopus 로고    scopus 로고
    • Environmental dependency of amphibian-ranavirus genotypic interactions: Evolutionary perspectives on infectious diseases
    • Echaubard P, Leduc J, Pauli B, Chinchar VG, Robert J, Lesbarrères D: Environmental dependency of amphibian-ranavirus genotypic interactions: evolutionary perspectives on infectious diseases. Evol Appl 2014, 7:723-733.
    • (2014) Evol Appl , vol.7 , pp. 723-733
    • Echaubard, P.1    Leduc, J.2    Pauli, B.3    Chinchar, V.G.4    Robert, J.5    Lesbarrères, D.6
  • 53
    • 0042162743 scopus 로고
    • The nature, origin, and evolution of parasitism
    • Edited by Horsfall JG, Dimond AE. Academic Press
    • McNew GL: The nature, origin, and evolution of parasitism. In Plant Pathology: An Advanced Treatise. Edited by Horsfall JG, Dimond AE. Academic Press; 1960:19-69.
    • (1960) Plant Pathology: An Advanced Treatise , pp. 19-69
    • McNew, G.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.