메뉴 건너뛰기




Volumn 247, Issue 9-10, 2014, Pages 1005-1018

Amphipol-Trapped ExbB–ExbD Membrane Protein Complex from Escherichia coli: A Biochemical and Structural Case Study

Author keywords

Amphipol; Detergent; EM; Membrane protein complex; SAXS SANS

Indexed keywords

AMPHIPOL; BACTERIAL PROTEIN; EXBB PROTEIN; EXBD PROTEIN; MEMBRANE PROTEIN; UNCLASSIFIED DRUG; AMPHIPOL A8-35; ESCHERICHIA COLI PROTEIN; EXBB PROTEIN, E COLI; EXBD PROTEIN, E COLI; MULTIPROTEIN COMPLEX; OUTER MEMBRANE PROTEIN; POLYMER; PROPYLAMINE; PROTEIN BINDING; SURFACTANT;

EID: 84911003599     PISSN: 00222631     EISSN: 14321424     Source Type: Journal    
DOI: 10.1007/s00232-014-9678-4     Document Type: Article
Times cited : (13)

References (64)
  • 1
    • 0012382504 scopus 로고    scopus 로고
    • Protein determination by UV absorption
    • Walker JM, (ed), Humana Press, Clifton:
    • Aitken A, Learmonth MP (2002) Protein determination by UV absorption. In: Walker JM (ed) The protein protocols handbook, 2nd edn. Humana Press, Clifton, pp 3–6
    • (2002) The protein protocols handbook , pp. 3-6
    • Aitken, A.1    Learmonth, M.P.2
  • 2
    • 40049099087 scopus 로고    scopus 로고
    • Microscale fluorescent thermal stability assay for membrane proteins
    • PID: 18334210, COI: 1:CAS:528:DC%2BD1cXjtVKjsro%3D
    • Alexandrov AI, Mileni M, Chien EYT, Hanson MA, Stevens RC (2008) Microscale fluorescent thermal stability assay for membrane proteins. Structure 16:351–359
    • (2008) Structure , vol.16 , pp. 351-359
    • Alexandrov, A.I.1    Mileni, M.2    Chien, E.Y.T.3    Hanson, M.A.4    Stevens, R.C.5
  • 3
    • 78650656603 scopus 로고    scopus 로고
    • Biomolecular solution X-ray scattering at the National Synchrotron Light Source
    • PID: 21169689, COI: 1:CAS:528:DC%2BC3cXhsFyisrvE
    • Allaire M, Yang L (2011) Biomolecular solution X-ray scattering at the National Synchrotron Light Source. J Synchrotron Radiat 18:41–44
    • (2011) J Synchrotron Radiat , vol.18 , pp. 41-44
    • Allaire, M.1    Yang, L.2
  • 4
    • 84911003666 scopus 로고    scopus 로고
    • Outer membrane protein F stabilised with minimal amphipol forms linear arrays and LPS-dependent 2D crystals
    • PID: 24585057
    • Arunmanee W, Harris JR, Lakey JH (2014) Outer membrane protein F stabilised with minimal amphipol forms linear arrays and LPS-dependent 2D crystals. J Membr Biol. doi:10.1007/s00232-014-9640-5
    • (2014) J Membr Biol
    • Arunmanee, W.1    Harris, J.R.2    Lakey, J.H.3
  • 5
    • 84880032567 scopus 로고    scopus 로고
    • Mutations in Escherichia coli ExbB transmembrane domains identify scaffolding and signal transduction functions and exclude participation in a proton pathway
    • PID: 23603742, COI: 1:CAS:528:DC%2BC3sXpsVarurw%3D
    • Baker KR, Postle K (2013) Mutations in Escherichia coli ExbB transmembrane domains identify scaffolding and signal transduction functions and exclude participation in a proton pathway. J Bacteriol 195:2898–2911
    • (2013) J Bacteriol , vol.195 , pp. 2898-2911
    • Baker, K.R.1    Postle, K.2
  • 6
    • 0029913411 scopus 로고    scopus 로고
    • Energy-coupled transport across the outer membrane of Escherichia coli: ExbB binds ExbD and TonB in vitro, and leucine 132 in the periplasmic region and aspartate 25 in the transmembrane region are important for ExbD activity
    • PID: 8631671, COI: 1:CAS:528:DyaK28XivFGkurw%3D
    • Braun V, Gaisser S, Herrmann C, Kampfenkel K, Killmann H, Traub I (1996) Energy-coupled transport across the outer membrane of Escherichia coli: ExbB binds ExbD and TonB in vitro, and leucine 132 in the periplasmic region and aspartate 25 in the transmembrane region are important for ExbD activity. J Bacteriol 178:2836–2845
    • (1996) J Bacteriol , vol.178 , pp. 2836-2845
    • Braun, V.1    Gaisser, S.2    Herrmann, C.3    Kampfenkel, K.4    Killmann, H.5    Traub, I.6
  • 7
    • 0346727448 scopus 로고    scopus 로고
    • Arrangement of core membrane segments in the MotA/MotB proton-channel complex of Escherichia coli
    • Braun TF, Al-Mawsawi LQ, Kojima S, Blair DF (2003) Arrangement of core membrane segments in the MotA/MotB proton-channel complex of Escherichia coli. Biochemistry 43:35–45
    • (2003) Biochemistry , vol.43 , pp. 35-45
    • Braun, T.F.1    Al-Mawsawi, L.Q.2    Kojima, S.3    Blair, D.F.4
  • 8
    • 0035163972 scopus 로고    scopus 로고
    • The TolQ–TolR proteins energize TolA and share homologies with the flagellar motor proteins MotA–MotB
    • PID: 11722743, COI: 1:CAS:528:DC%2BD3MXos1KgtL8%3D
    • Cascales E, Lloubès R, Sturgis JN (2001) The TolQ–TolR proteins energize TolA and share homologies with the flagellar motor proteins MotA–MotB. Mol Microbiol 42:795–807
    • (2001) Mol Microbiol , vol.42 , pp. 795-807
    • Cascales, E.1    Lloubès, R.2    Sturgis, J.N.3
  • 9
    • 85116173929 scopus 로고    scopus 로고
    • 1 in the presence of amphipols. J Membr Biol (submitted)
    • 1 in the presence of amphipols. J Membr Biol (submitted)
    • (2014)
  • 10
    • 33845449481 scopus 로고    scopus 로고
    • SIGNATURE: a single-particle selection system for molecular electron microscopy
    • PID: 16870473, COI: 1:CAS:528:DC%2BD28XhtlaltrbK
    • Chen JZ, Grigorieff N (2007) SIGNATURE: a single-particle selection system for molecular electron microscopy. J Struct Biol 157:168–173
    • (2007) J Struct Biol , vol.157 , pp. 168-173
    • Chen, J.Z.1    Grigorieff, N.2
  • 11
    • 34248636774 scopus 로고    scopus 로고
    • Bioinformatic analysis of the TonB protein family
    • PID: 17225063, COI: 1:CAS:528:DC%2BD2sXltlaqsbg%3D
    • Chu BH, Peacock RS, Vogel H (2007) Bioinformatic analysis of the TonB protein family. Biometals 20:467–483
    • (2007) Biometals , vol.20 , pp. 467-483
    • Chu, B.H.1    Peacock, R.S.2    Vogel, H.3
  • 12
    • 20444366584 scopus 로고    scopus 로고
    • Field-flow fractionation techniques for polymer and colloid analysis
    • Schmidt M, (ed), Springer, Berlin:
    • Cölfen H, Antonietti M (2000) Field-flow fractionation techniques for polymer and colloid analysis. In: Schmidt M (ed) New developments in polymer analytics I. Springer, Berlin, pp 67–187
    • (2000) New developments in polymer analytics I , pp. 67-187
    • Cölfen, H.1    Antonietti, M.2
  • 13
    • 67650080503 scopus 로고    scopus 로고
    • Amphipol-assisted in vitro folding of G protein-coupled receptors
    • PID: 19534448, COI: 1:CAS:528:DC%2BD1MXnt1Ogu7Y%3D
    • Dahmane T, Damian M, Mary S, Popot J-L, Banères J-L (2009) Amphipol-assisted in vitro folding of G protein-coupled receptors. Biochemistry 48:6516–6521
    • (2009) Biochemistry , vol.48 , pp. 6516-6521
    • Dahmane, T.1    Damian, M.2    Mary, S.3    Popot, J.-L.4    Banères, J.-L.5
  • 14
    • 79955615219 scopus 로고    scopus 로고
    • Sedimentation velocity to characterize surfactants and solubilized membrane proteins
    • PID: 21112401, COI: 1:CAS:528:DC%2BC3MXlvVCht7c%3D
    • Ebel C (2011) Sedimentation velocity to characterize surfactants and solubilized membrane proteins. Methods 54:56–66
    • (2011) Methods , vol.54 , pp. 56-66
    • Ebel, C.1
  • 15
    • 0027908505 scopus 로고
    • Field-flow fractionation: analysis of macromolecular, colloidal, and particulate materials
    • PID: 8502990, COI: 1:CAS:528:DyaK3sXkvVSrsrc%3D
    • Giddings J (1993) Field-flow fractionation: analysis of macromolecular, colloidal, and particulate materials. Science 260:1456–1465
    • (1993) Science , vol.260 , pp. 1456-1465
    • Giddings, J.1
  • 16
    • 84863935182 scopus 로고    scopus 로고
    • Well-defined critical association concentration and rapid adsorption at the air/water interface of a short amphiphilic polymer, amphipol A8-35: a study by Förster resonance energy transfer and dynamic surface tension measurements
    • PID: 22712750, COI: 1:CAS:528:DC%2BC38XovVyhtrw%3D
    • Giusti F, Popot J-L, Tribet C (2012) Well-defined critical association concentration and rapid adsorption at the air/water interface of a short amphiphilic polymer, amphipol A8-35: a study by Förster resonance energy transfer and dynamic surface tension measurements. Langmuir 28:10372–10380
    • (2012) Langmuir , vol.28 , pp. 10372-10380
    • Giusti, F.1    Popot, J.-L.2    Tribet, C.3
  • 18
    • 5644275289 scopus 로고    scopus 로고
    • Partial specific volume and solvent interactions of amphipol A8-35
    • PID: 15494140, COI: 1:CAS:528:DC%2BD2cXos1KlsLo%3D
    • Gohon Y, Pavlov G, Timmins P, Tribet C, Popot J-L, Ebel C (2004) Partial specific volume and solvent interactions of amphipol A8-35. Anal Biochem 334:318–334
    • (2004) Anal Biochem , vol.334 , pp. 318-334
    • Gohon, Y.1    Pavlov, G.2    Timmins, P.3    Tribet, C.4    Popot, J.-L.5    Ebel, C.6
  • 19
    • 32344431772 scopus 로고    scopus 로고
    • Well-defined nanoparticles formed by hydrophobic assembly of a short and polydisperse random terpolymer, amphipol A8-35
    • PID: 16430295, COI: 1:CAS:528:DC%2BD28Xht1Sisw%3D%3D
    • Gohon Y, Giusti F, Prata C, Charvolin D, Timmins P, Ebel C, Tribet C, Popot J-L (2006) Well-defined nanoparticles formed by hydrophobic assembly of a short and polydisperse random terpolymer, amphipol A8-35. Langmuir 22:1281–1290
    • (2006) Langmuir , vol.22 , pp. 1281-1290
    • Gohon, Y.1    Giusti, F.2    Prata, C.3    Charvolin, D.4    Timmins, P.5    Ebel, C.6    Tribet, C.7    Popot, J.-L.8
  • 21
    • 0028773889 scopus 로고
    • Volume changes on protein folding
    • PID: 7922041, COI: 1:CAS:528:DyaK2MXot1ersQ%3D%3D
    • Harpaz Y, Gerstein M, Chothia C (1994) Volume changes on protein folding. Structure 2:641–649
    • (1994) Structure , vol.2 , pp. 641-649
    • Harpaz, Y.1    Gerstein, M.2    Chothia, C.3
  • 22
    • 0024321837 scopus 로고
    • Membrane protein molecular weight determined by low-angle laser light-scattering photometry coupled with high-performance gel chromatography
    • Sidney Fleischer BF, (ed), Academic Press, Boston:
    • Hayashi Y, Matsui H, Takagi T, Takagi T (1989) Membrane protein molecular weight determined by low-angle laser light-scattering photometry coupled with high-performance gel chromatography. In: Sidney Fleischer BF (ed) Methods enzymol. Academic Press, Boston, pp 514–528
    • (1989) Methods enzymol , pp. 514-528
    • Hayashi, Y.1    Matsui, H.2    Takagi, T.3    Takagi, T.4
  • 23
    • 78049461183 scopus 로고    scopus 로고
    • Small-angle neutron scattering and contrast variation: a powerful combination for studying biological structures
    • PID: 21041939, COI: 1:CAS:528:DC%2BC3cXhtlKlsrnL
    • Heller WT (2010) Small-angle neutron scattering and contrast variation: a powerful combination for studying biological structures. Acta Crystallogr D Biol Crystallogr 66:1213–1217
    • (2010) Acta Crystallogr D Biol Crystallogr , vol.66 , pp. 1213-1217
    • Heller, W.T.1
  • 24
    • 0036299012 scopus 로고    scopus 로고
    • Oligomeric state of membrane transport proteins analyzed with blue native electrophoresis and analytical ultracentrifugation
    • PID: 11955011, COI: 1:CAS:528:DC%2BD38XivVaks7s%3D
    • Heuberger EHML, Veenhoff LM, Duurkens RH, Friesen RHE, Poolman B (2002) Oligomeric state of membrane transport proteins analyzed with blue native electrophoresis and analytical ultracentrifugation. J Mol Biol 317:591–600
    • (2002) J Mol Biol , vol.317 , pp. 591-600
    • Heuberger, E.H.M.L.1    Veenhoff, L.M.2    Duurkens, R.H.3    Friesen, R.H.E.4    Poolman, B.5
  • 25
    • 0036231227 scopus 로고    scopus 로고
    • Quantification of known components of the Escherichia coli TonB energy transduction system: TonB, ExbB, ExbD and FepA
    • PID: 11967085, COI: 1:CAS:528:DC%2BD38XjsFGrtLY%3D
    • Higgs PI, Larsen RA, Postle K (2002) Quantification of known components of the Escherichia coli TonB energy transduction system: TonB, ExbB, ExbD and FepA. Mol Microbiol 44:271–281
    • (2002) Mol Microbiol , vol.44 , pp. 271-281
    • Higgs, P.I.1    Larsen, R.A.2    Postle, K.3
  • 26
    • 0015836627 scopus 로고
    • A simple procedure for removal of triton X 100 from protein samples
    • PID: 4711106, COI: 1:CAS:528:DyaE3sXktVansbw%3D
    • Holloway PW (1973) A simple procedure for removal of triton X 100 from protein samples. Anal Biochem 53:304–308
    • (1973) Anal Biochem , vol.53 , pp. 304-308
    • Holloway, P.W.1
  • 27
    • 80053614487 scopus 로고    scopus 로고
    • Mutations in the ExbB cytoplasmic carboxy terminus prevent energy-dependent interaction between the TonB and ExbD periplasmic domains
    • PID: 21840979, COI: 1:CAS:528:DC%2BC3MXhtlWitb3M
    • Jana B, Manning M, Postle K (2011) Mutations in the ExbB cytoplasmic carboxy terminus prevent energy-dependent interaction between the TonB and ExbD periplasmic domains. J Bacteriol 193:5649–5657
    • (2011) J Bacteriol , vol.193 , pp. 5649-5657
    • Jana, B.1    Manning, M.2    Postle, K.3
  • 28
    • 0026723111 scopus 로고
    • Membrane topology of the Escherichia coli ExbD protein
    • PID: 1644779, COI: 1:CAS:528:DyaK38XlsVKrtbg%3D
    • Kampfenkel K, Braun V (1992) Membrane topology of the Escherichia coli ExbD protein. J Bacteriol 174:5485–5487
    • (1992) J Bacteriol , vol.174 , pp. 5485-5487
    • Kampfenkel, K.1    Braun, V.2
  • 29
    • 0027466914 scopus 로고
    • Topology of the ExbB protein in the cytoplasmic membrane of Escherichia coli
    • PID: 8449962, COI: 1:CAS:528:DyaK3sXitV2isbg%3D
    • Kampfenkel K, Braun V (1993) Topology of the ExbB protein in the cytoplasmic membrane of Escherichia coli. J Biol Chem 268:6050–6057
    • (1993) J Biol Chem , vol.268 , pp. 6050-6057
    • Kampfenkel, K.1    Braun, V.2
  • 30
    • 78651364685 scopus 로고    scopus 로고
    • TonB or not TonB: is that the question?
    • PID: 21455261, COI: 1:CAS:528:DC%2BC3MXisFemsrc%3D
    • Krewulak KD, Vogel HJ (2011) TonB or not TonB: is that the question? Biochem Cell Biol 89:87–97
    • (2011) Biochem Cell Biol , vol.89 , pp. 87-97
    • Krewulak, K.D.1    Vogel, H.J.2
  • 31
    • 33748926752 scopus 로고    scopus 로고
    • Stoichiometry and turnover in single, functioning membrane protein complexes
    • PID: 16971952, COI: 1:CAS:528:DC%2BD28Xpslaks74%3D
    • Leake MC, Chandler JH, Wadhams GH, Bai F, Berry RM, Armitage JP (2006) Stoichiometry and turnover in single, functioning membrane protein complexes. Nature 443:355–358
    • (2006) Nature , vol.443 , pp. 355-358
    • Leake, M.C.1    Chandler, J.H.2    Wadhams, G.H.3    Bai, F.4    Berry, R.M.5    Armitage, J.P.6
  • 32
    • 84889607320 scopus 로고    scopus 로고
    • Structure of the TRPV1 ion channel determined by electron cryo-microscopy
    • Liao M, Erhu C, Julius D, Cheng T (2014) Structure of the TRPV1 ion channel determined by electron cryo-microscopy. Nature 504:107–112
    • (2014) Nature , vol.504 , pp. 107-112
    • Liao, M.1    Erhu, C.2    Julius, D.3    Cheng, T.4
  • 33
    • 33751249344 scopus 로고    scopus 로고
    • Bio-SANS—A dedicated facility for neutron structural biology at Oak Ridge National Laboratory
    • Lynn GW, Heller W, Urban V, Wignall GD, Weiss K, Myles DAA (2006) Bio-SANS—A dedicated facility for neutron structural biology at Oak Ridge National Laboratory. Phys B Condens Matter 385–386(Part 2):880–882
    • (2006) Phys B Condens Matter , vol.385-386 , pp. 880-882
    • Lynn, G.W.1    Heller, W.2    Urban, V.3    Wignall, G.D.4    Weiss, K.5    Myles, D.A.A.6
  • 34
    • 38849171893 scopus 로고    scopus 로고
    • NMR spectroscopic and analytical ultracentrifuge analysis of membrane protein detergent complexes
    • PID: 17988403
    • Maslennikov I, Kefala G, Johnson C, Riek R, Choe S, Kwiatkowski W (2007) NMR spectroscopic and analytical ultracentrifuge analysis of membrane protein detergent complexes. BMC Struct Biol 7:74
    • (2007) BMC Struct Biol , vol.7 , pp. 74
    • Maslennikov, I.1    Kefala, G.2    Johnson, C.3    Riek, R.4    Choe, S.5    Kwiatkowski, W.6
  • 35
    • 0347479229 scopus 로고    scopus 로고
    • Molecular basis of bacterial outer membrane permeability revisited
    • PID: 14665678, COI: 1:CAS:528:DC%2BD2cXmt1Sqsg%3D%3D
    • Nikaido H (2003) Molecular basis of bacterial outer membrane permeability revisited. Microbiol Mol Biol Rev 67:593–656
    • (2003) Microbiol Mol Biol Rev , vol.67 , pp. 593-656
    • Nikaido, H.1
  • 36
    • 2342662152 scopus 로고    scopus 로고
    • Negative staining and image classification—powerful tools in modern electron microscopy
    • PID: 15103397, COI: 1:CAS:528:DC%2BD2cXktVKlt7g%3D
    • Ohi M, Li Y, Cheng Y, Walz T (2004) Negative staining and image classification—powerful tools in modern electron microscopy. Biol Proced Online 6:23–34
    • (2004) Biol Proced Online , vol.6 , pp. 23-34
    • Ohi, M.1    Li, Y.2    Cheng, Y.3    Walz, T.4
  • 37
    • 84855824413 scopus 로고    scopus 로고
    • The same periplasmic ExbD residues mediate in vivo interactions between ExbD homodimers and ExbD–TonB heterodimers
    • PID: 21984795, COI: 1:CAS:528:DC%2BC3MXhs1Sht73N
    • Ollis AA, Postle K (2011) The same periplasmic ExbD residues mediate in vivo interactions between ExbD homodimers and ExbD–TonB heterodimers. J Bacteriol 193:6852–6863
    • (2011) J Bacteriol , vol.193 , pp. 6852-6863
    • Ollis, A.A.1    Postle, K.2
  • 38
    • 84864020106 scopus 로고    scopus 로고
    • The ExbD periplasmic domain contains distinct functional regions for two stages in TonB energization
    • PID: 22493019, COI: 1:CAS:528:DC%2BC38XosFejsLg%3D
    • Ollis AA, Kumar A, Postle K (2012) The ExbD periplasmic domain contains distinct functional regions for two stages in TonB energization. J Bacteriol 194:3069–3077
    • (2012) J Bacteriol , vol.194 , pp. 3069-3077
    • Ollis, A.A.1    Kumar, A.2    Postle, K.3
  • 39
    • 0028871804 scopus 로고
    • How to measure and predict the molar absorption coefficient of a protein
    • PID: 8563639, COI: 1:CAS:528:DyaK2MXpsVGqt7k%3D
    • Pace CN, Vajdos F, Fee L, Grimsley G, Gray T (1995) How to measure and predict the molar absorption coefficient of a protein. Protein Sci 4:2411–2423
    • (1995) Protein Sci , vol.4 , pp. 2411-2423
    • Pace, C.N.1    Vajdos, F.2    Fee, L.3    Grimsley, G.4    Gray, T.5
  • 41
    • 84910125751 scopus 로고    scopus 로고
    • Molecular dynamics simulations of a membrane protein/amphipol complex, J Membr Biol:
    • Perlmutter JD, Popot J-L, Sachs JN (2014) Molecular dynamics simulations of a membrane protein/amphipol complex. J Membr Biol. doi:10.1007/s00232-014-9690-8
    • (2014) Sachs JN
    • Perlmutter, J.D.1    Popot, J.-L.2
  • 43
    • 77957662541 scopus 로고    scopus 로고
    • ExbB protein in the cytoplasmic membrane of Escherichia coli forms a stable oligomer
    • PID: 20799747, COI: 1:CAS:528:DC%2BC3cXhtFGrur%2FI
    • Pramanik A, Zhang F, Schwarz H, Schreiber F, Braun V (2010) ExbB protein in the cytoplasmic membrane of Escherichia coli forms a stable oligomer. Biochemistry 49:8721–8728
    • (2010) Biochemistry , vol.49 , pp. 8721-8728
    • Pramanik, A.1    Zhang, F.2    Schwarz, H.3    Schreiber, F.4    Braun, V.5
  • 44
    • 80054755659 scopus 로고    scopus 로고
    • Oligomeric structure of ExbB and ExbB-ExbD isolated from Escherichia coli as revealed by LILBID mass spectrometry
    • PID: 21905676, COI: 1:CAS:528:DC%2BC3MXhtF2ktLjO
    • Pramanik A, Hauf W, Hoffmann J, Cernescu M, Brutschy B, Braun V (2011) Oligomeric structure of ExbB and ExbB-ExbD isolated from Escherichia coli as revealed by LILBID mass spectrometry. Biochemistry 50:8950–8956
    • (2011) Biochemistry , vol.50 , pp. 8950-8956
    • Pramanik, A.1    Hauf, W.2    Hoffmann, J.3    Cernescu, M.4    Brutschy, B.5    Braun, V.6
  • 45
    • 84884184827 scopus 로고    scopus 로고
    • Sedimentation velocity analytical ultracentrifugation in hydrogenated and deuterated solvents for the characterization of membrane proteins
    • Rapaport D, Herrmann JM, (eds), Humana Press, New York:
    • Roy A, Nury H, Wiseman B, Sarwan J, Jault J-M, Ebel C (2013) Sedimentation velocity analytical ultracentrifugation in hydrogenated and deuterated solvents for the characterization of membrane proteins. In: Rapaport D, Herrmann JM (eds) Membrane biogenesis. Humana Press, New York, pp 219–251
    • (2013) Membrane biogenesis , pp. 219-251
    • Roy, A.1    Nury, H.2    Wiseman, B.3    Sarwan, J.4    Jault, J.-M.5    Ebel, C.6
  • 46
    • 33750293579 scopus 로고    scopus 로고
    • Analytical ultracentrifuge for the characterization of detergent in solution
    • Wandrey C, Cölfen H, (eds), Springer, Berlin:
    • Salvay A, Ebel C (2006) Analytical ultracentrifuge for the characterization of detergent in solution. In: Wandrey C, Cölfen H (eds) Analytical ultracentrifugation VIII. Springer, Berlin, pp 74–82
    • (2006) Analytical ultracentrifugation VIII , pp. 74-82
    • Salvay, A.1    Ebel, C.2
  • 47
    • 44949165726 scopus 로고    scopus 로고
    • Image processing for electron microscopy single-particle analysis using XMIPP
    • PID: 18536645, COI: 1:CAS:528:DC%2BD1cXmvVemtrY%3D
    • Scheres SHW, Núñez-Ramírez R, Sorzano COS, Carazo JM, Marabini R (2008) Image processing for electron microscopy single-particle analysis using XMIPP. Nat Protoc 3:977–990
    • (2008) Nat Protoc , vol.3 , pp. 977-990
    • Scheres, S.H.W.1    Núñez-Ramírez, R.2    Sorzano, C.O.S.3    Carazo, J.M.4    Marabini, R.5
  • 48
    • 84863205849 scopus 로고    scopus 로고
    • NIH Image to ImageJ: 25 years of image analysis
    • COI: 1:CAS:528:DC%2BC38XhtVKntb7P
    • Schneider CA (2012) NIH Image to ImageJ: 25 years of image analysis. Nat Meth 9:671–675
    • (2012) Nat Meth , vol.9 , pp. 671-675
    • Schneider, C.A.1
  • 49
    • 0034009520 scopus 로고    scopus 로고
    • Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
    • PID: 10692345, COI: 1:CAS:528:DC%2BD3cXhsF2jtbg%3D
    • Schuck P (2000) Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling. Biophys J 78:1606–1619
    • (2000) Biophys J , vol.78 , pp. 1606-1619
    • Schuck, P.1
  • 50
    • 0026910457 scopus 로고
    • Determination of the regularization parameter in indirect-transform methods using perceptual criteria
    • Svergun DI (1992) Determination of the regularization parameter in indirect-transform methods using perceptual criteria. J Appl Crystallogr 25:495–503
    • (1992) J Appl Crystallogr , vol.25 , pp. 495-503
    • Svergun, D.I.1
  • 51
    • 0033001996 scopus 로고    scopus 로고
    • Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing
    • PID: 10354416, COI: 1:CAS:528:DyaK1MXjs1Cgsbs%3D
    • Svergun DI (1999) Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing. Biophys J 76:2879–2886
    • (1999) Biophys J , vol.76 , pp. 2879-2886
    • Svergun, D.I.1
  • 52
    • 84899917848 scopus 로고    scopus 로고
    • Coordinated rearrangements between cytoplasmic and periplasmic domains of the membrane protein complex ExbB–ExbD of Escherichia coli
    • PID: 24657092, COI: 1:CAS:528:DC%2BC2cXks1Oks7s%3D
    • Sverzhinsky A, Fabre L, Cottreau AL, Biot-Pelletier DMP, Khalil S, Bostina M, Rouiller I, Coulton JW (2014) Coordinated rearrangements between cytoplasmic and periplasmic domains of the membrane protein complex ExbB–ExbD of Escherichia coli. Structure 22:791–797
    • (2014) Structure , vol.22 , pp. 791-797
    • Sverzhinsky, A.1    Fabre, L.2    Cottreau, A.L.3    Biot-Pelletier, D.M.P.4    Khalil, S.5    Bostina, M.6    Rouiller, I.7    Coulton, J.W.8
  • 53
    • 0030451437 scopus 로고    scopus 로고
    • Amphipols: polymers that keep membrane proteins soluble in aqueous solutions
    • PID: 8986761, COI: 1:CAS:528:DyaK2sXmslyq
    • Tribet C, Audebert R, Popot J-L (1996) Amphipols: polymers that keep membrane proteins soluble in aqueous solutions. Proc Natl Acad Sci USA 93:15047–15050
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 15047-15050
    • Tribet, C.1    Audebert, R.2    Popot, J.-L.3
  • 54
    • 0037701585 scopus 로고    scopus 로고
    • Uniqueness of ab initio shape determination in small-angle scattering
    • COI: 1:CAS:528:DC%2BD3sXjtVOgu7w%3D
    • Volkov VV, Svergun DI (2003) Uniqueness of ab initio shape determination in small-angle scattering. J Appl Crystallogr 36:860–864
    • (2003) J Appl Crystallogr , vol.36 , pp. 860-864
    • Volkov, V.V.1    Svergun, D.I.2
  • 55
    • 84891824380 scopus 로고    scopus 로고
    • Characterization of cationic polymers by asymmetric flow field-flow fractionation and multi-angle light scattering—a comparison with traditional techniques
    • PID: 24380656, COI: 1:CAS:528:DC%2BC2cXisVeruw%3D%3D
    • Wagner M, Pietsch C, Tauhardt L, Schallon A, Schubert US (2014) Characterization of cationic polymers by asymmetric flow field-flow fractionation and multi-angle light scattering—a comparison with traditional techniques. J Chromatogr A 1325:195–203
    • (2014) J Chromatogr A , vol.1325 , pp. 195-203
    • Wagner, M.1    Pietsch, C.2    Tauhardt, L.3    Schallon, A.4    Schubert, U.S.5
  • 58
    • 77956513916 scopus 로고    scopus 로고
    • Mass estimation of native proteins by blue native electrophoresis: Principles and practical hints
    • PID: 20173216, COI: 1:CAS:528:DC%2BC3cXhtlegt7vL
    • Wittig I, Beckhaus T, Wumaier Z, Karas M, Schägger H (2010) Mass estimation of native proteins by blue native electrophoresis: Principles and practical hints. Mol Cell Proteomics 9:2149–2161
    • (2010) Mol Cell Proteomics , vol.9 , pp. 2149-2161
    • Wittig, I.1    Beckhaus, T.2    Wumaier, Z.3    Karas, M.4    Schägger, H.5
  • 59
    • 84874060914 scopus 로고    scopus 로고
    • Using an in-vacuum CCD detector for simultaneous small- and wide-angle scattering at beamline X9
    • PID: 23412476, COI: 1:CAS:528:DC%2BC3sXislSjs78%3D
    • Yang L (2013) Using an in-vacuum CCD detector for simultaneous small- and wide-angle scattering at beamline X9. J Synchrotron Radiat 20:211–218
    • (2013) J Synchrotron Radiat , vol.20 , pp. 211-218
    • Yang, L.1
  • 60
    • 84863011784 scopus 로고    scopus 로고
    • Iterative stable alignment and clustering of 2D transmission electron microscope images
    • PID: 22325773, COI: 1:CAS:528:DC%2BC38XitFGltrg%3D
    • Yang Z, Fang J, Chittuluru J, Asturias FJ, Penczek PA (2012) Iterative stable alignment and clustering of 2D transmission electron microscope images. Structure 20:237–247
    • (2012) Structure , vol.20 , pp. 237-247
    • Yang, Z.1    Fang, J.2    Chittuluru, J.3    Asturias, F.J.4    Penczek, P.A.5
  • 61
    • 63249134496 scopus 로고    scopus 로고
    • Mapping the interactions between Escherichia coli Tol subunits: Rotation of the TolR transmembrane helix
    • PID: 19075020, COI: 1:CAS:528:DC%2BD1MXhsFKqurg%3D
    • Zhang XY-Z, Goemaere EL, Thomé R, Gavioli M, Cascales E, Lloubès R (2009) Mapping the interactions between Escherichia coli Tol subunits: Rotation of the TolR transmembrane helix. J Biol Chem 284:4275–4282
    • (2009) J Biol Chem , vol.284 , pp. 4275-4282
    • Zhang, X.Y.-Z.1    Goemaere, E.L.2    Thomé, R.3    Gavioli, M.4    Cascales, E.5    Lloubès, R.6
  • 63
    • 35148874303 scopus 로고    scopus 로고
    • Dynamics of membrane protein/amphipol association studied by Förster resonance energy transfer: implications for in vitro studies of amphipol-stabilized membrane proteins
    • PID: 17705558, COI: 1:CAS:528:DC%2BD2sXpt1Wisb0%3D
    • Zoonens M, Giusti F, Zito F, Popot J-L (2007) Dynamics of membrane protein/amphipol association studied by Förster resonance energy transfer: implications for in vitro studies of amphipol-stabilized membrane proteins. Biochemistry 46:10392–10404
    • (2007) Biochemistry , vol.46 , pp. 10392-10404
    • Zoonens, M.1    Giusti, F.2    Zito, F.3    Popot, J.-L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.