-
1
-
-
14844290215
-
Structures of complete RNA polymerase II and its subcomplex, Rpb4/7
-
DOI 10.1074/jbc.M413038200
-
K.J. Armache, S. Mitterweger, A. Meinhart, and P. Cramer Structures of complete RNA polymerase II and its subcomplex, Rpb4/7 J. Biol. Chem. 280 2005 7131 7134 (Pubitemid 40341269)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.8
, pp. 7131-7134
-
-
Armache, K.-J.1
Mitterweger, S.2
Meinhart, A.3
Cramer, P.4
-
2
-
-
33845284275
-
The Transform Class in SPARX and EMAN2
-
DOI 10.1016/j.jsb.2006.06.002, PII S1047847706002024, Software Tools for Macromolecular Microscopy
-
P.R. Baldwin, and P.A. Penczek The transform class in SPARX and EMAN2 J. Struct. Biol. 157 2007 250 261 (Pubitemid 44880791)
-
(2007)
Journal of Structural Biology
, vol.157
, Issue.1
, pp. 250-261
-
-
Baldwin, P.R.1
Penczek, P.A.2
-
5
-
-
18644372282
-
Test problem generator for the multidimensional assignment problem
-
DOI 10.1007/s10589-005-4558-6
-
D.A. Grundel, and P.M. Pardalos Test problem generator for the multidimensional assignment problem Comput. Optim. Appl. 30 2005 133 146 (Pubitemid 40661597)
-
(2005)
Computational Optimization and Applications
, vol.30
, Issue.2
, pp. 133-146
-
-
Grundel, D.A.1
Pardalos, P.M.2
-
6
-
-
33845296470
-
SPARX, a new environment for Cryo-EM image processing
-
DOI 10.1016/j.jsb.2006.07.003, PII S1047847706002127, Software Tools for Macromolecular Microscopy
-
M. Hohn, G. Tang, G. Goodyear, P.R. Baldwin, Z. Huang, P.A. Penczek, C. Yang, R.M. Glaeser, P.D. Adams, and S.J. Ludtke SPARX, a new environment for Cryo-EM image processing J. Struct. Biol. 157 2007 47 55 (Pubitemid 44880795)
-
(2007)
Journal of Structural Biology
, vol.157
, Issue.1
, pp. 47-55
-
-
Hohn, M.1
Tang, G.2
Goodyear, G.3
Baldwin, P.R.4
Huang, Z.5
Penczek, P.A.6
Yang, C.7
Glaeser, R.M.8
Adams, P.D.9
Ludtke, S.J.10
-
7
-
-
0036289516
-
Efficiency of 2D alignment methods
-
DOI 10.1016/S0304-3991(01)00154-1, PII S0304399101001541
-
L. Joyeux, and P.A. Penczek Efficiency of 2D alignment methods Ultramicroscopy 92 2002 33 46 (Pubitemid 34718139)
-
(2002)
Ultramicroscopy
, vol.92
, Issue.2
, pp. 33-46
-
-
Joyeux, L.1
Penczek, P.A.2
-
8
-
-
79956149700
-
Empirical evaluation of construction heuristics for the multidimensional assignment problem
-
J.D.J. Chan, M.S. Rahman, College Publications London
-
D. Karapetyan, G. Gutin, and B. Goldengorin Empirical evaluation of construction heuristics for the multidimensional assignment problem J.D.J. Chan, M.S. Rahman, London Algorithmics 2008: Theory and Practice 2008 College Publications London 107 122
-
(2008)
London Algorithmics 2008: Theory and Practice
, pp. 107-122
-
-
Karapetyan, D.1
Gutin, G.2
Goldengorin, B.3
-
9
-
-
33846223946
-
Molecular Architecture and Conformational Flexibility of Human RNA Polymerase II
-
DOI 10.1016/j.str.2006.09.011, PII S0969212606003972
-
S.A. Kostek, P. Grob, S. De Carlo, J.S. Lipscomb, F. Garczarek, and E. Nogales Molecular architecture and conformational flexibility of human RNA polymerase II Structure 14 2006 1691 1700 (Pubitemid 46107277)
-
(2006)
Structure
, vol.14
, Issue.11
, pp. 1691-1700
-
-
Kostek, S.A.1
Grob, P.2
De Carlo, S.3
Lipscomb, J.S.4
Garczarek, F.5
Nogales, E.6
-
11
-
-
0026521233
-
Three-dimensional reconstruction of single particles embedded in ice
-
P. Penczek, M. Radermacher, and J. Frank Three-dimensional reconstruction of single particles embedded in ice Ultramicroscopy 40 1992 33 53
-
(1992)
Ultramicroscopy
, vol.40
, pp. 33-53
-
-
Penczek, P.1
Radermacher, M.2
Frank, J.3
-
13
-
-
77957322311
-
Single Particle Reconstruction
-
U. Shmueli, Springer New York
-
P.A. Penczek Single Particle Reconstruction U. Shmueli, International Tables for Crystallography 2008 Springer New York 375 388
-
(2008)
International Tables for Crystallography
, pp. 375-388
-
-
Penczek, P.A.1
-
14
-
-
77957296661
-
Resolution measures in molecular electron microscopy
-
P.A. Penczek Resolution measures in molecular electron microscopy Methods Enzymol. 482 2010 73 100
-
(2010)
Methods Enzymol.
, vol.482
, pp. 73-100
-
-
Penczek, P.A.1
-
15
-
-
0030198739
-
A common-lines based method for determining orientations for N>3 particle projections simultaneously
-
DOI 10.1016/0304-3991(96)00037-X, PII S030439919600037X
-
P.A. Penczek, J. Zhu, and J. Frank A common-lines based method for determining orientations for N > 3 particle projections simultaneously Ultramicroscopy 63 1996 205 218 (Pubitemid 26370283)
-
(1996)
Ultramicroscopy
, vol.63
, Issue.3-4
, pp. 205-218
-
-
Penczek, P.A.1
Zhu, J.2
Frank, J.3
-
16
-
-
80855133523
-
Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images
-
P.A. Penczek, M. Kimmel, and C.M.T. Spahn). Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images Struct. 19 2011 1582 1590
-
(2011)
Struct.
, vol.19
, pp. 1582-1590
-
-
Penczek, P.A.1
Kimmel, M.2
Spahn, C.M.T.3
-
17
-
-
62649162306
-
GTPase activation of elongation factor EF-Tu by the ribosome during decoding
-
J.C. Schuette, F.V.T. Murphy 4th, A.C. Kelley, J.R. Weir, J. Giesebrecht, S.R. Connell, J. Loerke, T. Mielke, W. Zhang, and P.A. Penczek GTPase activation of elongation factor EF-Tu by the ribosome during decoding EMBO J. 28 2009 755 765
-
(2009)
EMBO J.
, vol.28
, pp. 755-765
-
-
Schuette, J.C.1
Murphy IV, F.V.T.2
Kelley, A.C.3
Weir, J.R.4
Giesebrecht, J.5
Connell, S.R.6
Loerke, J.7
Mielke, T.8
Zhang, W.9
Penczek, P.A.10
-
18
-
-
77953710827
-
A clustering approach to multireference alignment of single-particle projections in electron microscopy
-
C.O. Sorzano, J.R. Bilbao-Castro, Y. Shkolnisky, M. Alcorlo, R. Melero, G. Caffarena-Fernández, M. Li, G. Xu, R. Marabini, and J.M. Carazo A clustering approach to multireference alignment of single-particle projections in electron microscopy J. Struct. Biol. 171 2010 197 206
-
(2010)
J. Struct. Biol.
, vol.171
, pp. 197-206
-
-
Sorzano, C.O.1
Bilbao-Castro, J.R.2
Shkolnisky, Y.3
Alcorlo, M.4
Melero, R.5
Caffarena-Fernández, G.6
Li, M.7
Xu, G.8
Marabini, R.9
Carazo, J.M.10
-
19
-
-
70349884311
-
Exploring conformational modes of macromolecular assemblies by multiparticle cryo-EM
-
C.M. Spahn, and P.A. Penczek Exploring conformational modes of macromolecular assemblies by multiparticle cryo-EM Curr. Opin. Struct. Biol. 19 2009 623 631
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, pp. 623-631
-
-
Spahn, C.M.1
Penczek, P.A.2
-
20
-
-
0021645447
-
Multivariate statistical classification of noisy images (randomly oriented biological macromolecules)
-
DOI 10.1016/0304-3991(84)90066-4
-
M. van Heel Multivariate statistical classification of noisy images (randomly oriented biological macromolecules) Ultramicroscopy 13 1984 165 183 (Pubitemid 15498938)
-
(1984)
Ultramicroscopy
, vol.13
, Issue.1-2
, pp. 165-183
-
-
Van Heel, M.1
-
21
-
-
0031345518
-
L-BFGS-B: Algorithm 778: L-BFGS-B, FORTRAN routines for large scale bound constrained optimization
-
C. Zhu, R.H. Byrd, P. Lu, and J. Nocedal L-BFGS-B: Algorithm 778: L-BFGS-B, FORTRAN routines for large scale bound constrained optimization ACM Trans. Math. Softw. 23 1997 550 560
-
(1997)
ACM Trans. Math. Softw.
, vol.23
, pp. 550-560
-
-
Zhu, C.1
Byrd, R.H.2
Lu, P.3
Nocedal, J.4
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