High-resolution genetic map for understanding the effect of genome-wide recombination rate on nucleotide diversity in watermelon

G3: Genes, Genomes, Genetics

Volumn 4, Issue 11, 2014, Pages 2219-2230

  Reddy, Umesh K ^a   Nimmakayala, Padma ^a   Levi, Amnon ^b   Abburi, Venkata Lakshmi ^a   Saminathan, Thangasamy ^a   Tomason, Yan R ^a   Vajja, Gopinath ^a   Reddy, Rishi ^a   Abburi, Lavanya ^a   Wehner, Todd C ^c   Ronin, Yefim ^d   Karol, Abraham ^d  

^a WEST VIRGINIA STATE UNIVERSITY   (United States)

^b USDA ARS US Vegetable Laboratory   (United States)

^c NORTH CAROLINA STATE UNIVERSITY   (United States)

^d UNIVERSITY OF HAIFA   (Israel)

Author keywords

Genome wide recombination rate; Genotyping by sequencing; High density genetic map; Linkage disequilibrium; Selective sweep; Watermelon

Indexed keywords

GENOMIC DNA;

ARTICLE; CHROMOSOME 3; CHROMOSOME REARRANGEMENT; CULTIVAR; DOMESTICATION; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENE MAPPING; GENETIC PARAMETERS; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENOME ANALYSIS; GENOME WIDE NUCLEOTIDE DIVERSITY; GENOME WIDE VARIATION IN RECOMBINATION RATE; GENOTYPE; GENOTYPING BY SEQUENCING; LINKAGE ANALYSIS; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; POPULATION STRUCTURE; PRINCIPAL COMPONENT ANALYSIS; SELECTIVE SWEEP; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; WATERMELON; WILD TYPE; CITRULLUS; GENETIC SELECTION; GENETICS; PLANT GENOME;

CITRULLUS LANATUS VAR. LANATUS;

CITRULLUS; GENOME, PLANT; LINKAGE DISEQUILIBRIUM; POLYMORPHISM, SINGLE NUCLEOTIDE; RECOMBINATION, GENETIC; SELECTION, GENETIC;

EID: 84910679017     PISSN: None     EISSN: 21601836     Source Type: Journal    
DOI: 10.1534/g3.114.012815     Document Type: Article

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