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Volumn 183, Issue 4, 2009, Pages 1545-1553

Reliability of genomic predictions across multiple populations

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; BREEDING; CATTLE; GENE LINKAGE DISEQUILIBRIUM; GENETIC TRAIT; GENETIC VARIABILITY; GENOMICS; GENOTYPE; HERITABILITY; NONHUMAN; PHENOTYPE; POPULATION GENETICS; PREDICTION; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; RELIABILITY;

EID: 71549118527     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.109.104935     Document Type: Article
Times cited : (261)

References (29)
  • 1
    • 37249066995 scopus 로고    scopus 로고
    • Linkage disequilibrium in related breeding lines of chickens
    • ANDREESCU, C., S. AVENDANO, S. R. BROWN, A. HASSEN, S. J. LAMONT et al., 2007 Linkage disequilibrium in related breeding lines of chickens. Genetics 177: 2161-2169.
    • (2007) Genetics , vol.177 , pp. 2161-2169
    • Andreescu, C.1    Avendano, S.2    Brown, S.R.3    Hassen, A.4    Lamont, S.J.5
  • 2
    • 34547135987 scopus 로고    scopus 로고
    • A validated whole genome association study of effi- Cient food conversion in cattle
    • BARENDSE, W., A. REVERTER, R. J. BUNCH, B. E. HARRISON, W. BARRIS et al., 2007 A validated whole genome association study of effi- cient food conversion in cattle. Genetics 176: 1893-1905.
    • (2007) Genetics , vol.176 , pp. 1893-1905
    • Barendse, W.1    Reverter, A.2    Bunch, R.J.3    Harrison, B.E.4    Barris, W.5
  • 3
    • 36849093104 scopus 로고    scopus 로고
    • Accuracy of genomic selection using different methods to define haplotypes
    • CALUS, M. P. L., T. H. E. MEUWISSEN, A. P. W. DE ROOS and R. F. VEERKAMP, 2008 Accuracy of genomic selection using different methods to define haplotypes. Genetics 178: 553-561.
    • (2008) Genetics , vol.178 , pp. 553-561
    • Calus, M.P.L.1    Meuwissen, T.H.E.2    De Roos, A.P.W.3    Veerkamp, R.F.4
  • 4
    • 54449097329 scopus 로고    scopus 로고
    • Accuracy of predicting the genetic risk of disease using a genomewide approach
    • DAETWYLER, H. D., B. VILLANUEVA and J. A. WOOLLIAMS, 2008 Accuracy of predicting the genetic risk of disease using a genomewide approach. PLoS ONE 3(10): e3395.
    • (2008) PLoS ONE , vol.3 , Issue.10
    • Daetwyler, H.D.1    Villanueva, B.2    Woolliams, J.A.3
  • 5
    • 52049096371 scopus 로고    scopus 로고
    • Linkage disequilibrium and persistence of phase in Holstein- Friesian, Jersey and Angus cattle
    • DE ROOS, A. P. W., B. J. HAYES, R. SPELMAN AND M. E. GODDARD, 2008 Linkage disequilibrium and persistence of phase in Holstein- Friesian, Jersey and Angus cattle. Genetics 179: 1503-1512.
    • (2008) Genetics , vol.179 , pp. 1503-1512
    • De Roos, A.P.W.1    Hayes, B.J.2    Spelman, R.3    Goddard, M.E.4
  • 6
    • 33847011041 scopus 로고    scopus 로고
    • Characterizing linkage disequilibrium in pig populations
    • DU, F.-X., A. C. CLUTTER AND M. M. LOHUIS, 2007 Characterizing linkage disequilibrium in pig populations. Int. J. Biol. Sci. 3: 166-178.
    • (2007) Int. J. Biol. Sci. , vol.3 , pp. 166-178
    • F-X, D.U.1    Clutter, A.C.2    Lohuis, M.M.3
  • 7
    • 35548984721 scopus 로고    scopus 로고
    • Genetic and haplotypic structure in 14 European and African cattle breeds
    • GAUTIER, M., T. FARAUT, K. MOAZAMI-GOUDARZI, V. NAVRATIL, M. FOGLIO et al., 2007 Genetic and haplotypic structure in 14 European and African cattle breeds. Genetics 177: 1059-1070.
    • (2007) Genetics , vol.177 , pp. 1059-1070
    • Gautier, M.1    Faraut, T.2    Moazami-Goudarzi, K.3    Navratil, V.4    Foglio, M.5
  • 8
    • 0037274690 scopus 로고    scopus 로고
    • On marker-assisted prediction of genetic value: Beyond the ridge
    • GIANOLA, D., M. PEREZ-ENCISO and M. TORO, 2003 On marker-assisted prediction of genetic value: beyond the ridge. Genetics 163: 347-365.
    • (2003) Genetics , vol.163 , pp. 347-365
    • Gianola, D.1    Perez-Enciso, M.2    Toro, M.3
  • 9
    • 67349287476 scopus 로고    scopus 로고
    • Genomic selection: Prediction of accuracy and maximisation of long term response
    • GODDARD, M. E., 2009 Genomic selection: prediction of accuracy and maximisation of long term response. Genetica 136: 245-257.
    • (2009) Genetica , vol.136 , pp. 245-257
    • Goddard, M.E.1
  • 10
    • 66249122107 scopus 로고    scopus 로고
    • Mapping genes for complex traits in domestic animals and their use in breeding programmes
    • GODDARD, M. E., and B. J. HAYES, 2009 Mapping genes for complex traits in domestic animals and their use in breeding programmes. Nat. Rev. Genet. 10: 381-391.
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 381-391
    • Goddard, M.E.1    Hayes, B.J.2
  • 11
    • 37249083895 scopus 로고    scopus 로고
    • The impact of genetic relationship information on genome-assisted breeding values
    • HABIER, D., R. L. FERNANDO and J. C. M. DEKKERS, 2007 The impact of genetic relationship information on genome-assisted breeding values. Genetics 177: 2389-2397.
    • (2007) Genetics , vol.177 , pp. 2389-2397
    • Habier, D.1    Fernando, R.L.2    Dekkers, J.C.M.3
  • 12
    • 26444519053 scopus 로고    scopus 로고
    • Extent and consistency across generations of linkage disequilibrium in commercial layer chicken breeding populations
    • HEIFETZ, E. M., J. E. FULTON, N. O'SULLIVAN, H. ZHAO, J. C. M. DEKKERS et al., 2005 Extent and consistency across generations of linkage disequilibrium in commercial layer chicken breeding populations. Genetics 171: 1173-1181.
    • (2005) Genetics , vol.171 , pp. 1173-1181
    • Heifetz, E.M.1    Fulton, J.E.2    O'Sullivan, N.3    Zhao, H.4    Dekkers, J.C.M.5
  • 13
    • 33646226097 scopus 로고
    • Linkage disequilibrium in finite populations
    • HILL, W. G., and A. ROBERTSON, 1968 Linkage disequilibrium in finite populations. Theor. Appl. Genet. 38: 226-231.
    • (1968) Theor. Appl. Genet. , vol.38 , pp. 226-231
    • Hill, W.G.1    Robertson, A.2
  • 14
    • 48249096806 scopus 로고    scopus 로고
    • Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies
    • HOGGART, C. J., J. C. WHITTAKER, M. DE IORIO and D. J. BALDING, 2008 Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies. PLoS Genet. 4(7): e1000130.
    • (2008) PLoS Genet. , vol.4 , Issue.7
    • Hoggart, C.J.1    Whittaker, J.C.2    De Iorio, M.3    Balding, D.J.4
  • 16
    • 0025217786 scopus 로고
    • Efficiency of marker-assisted selection in the improvement of quantitative traits
    • LANDE, R., and R. THOMPSON, 1990 Efficiency of marker-assisted selection in the improvement of quantitative traits. Genetics 124: 743-756. (Pubitemid 20106345)
    • (1990) Genetics , vol.124 , Issue.3 , pp. 743-756
    • Lande, R.1    Thompson, R.2
  • 17
    • 55449114253 scopus 로고    scopus 로고
    • Predicting unobserved phenotypes for complex traits from whole-genome SNP data
    • LEE, S. H., J. H. J. VAN DER WERF, B. J. HAYES, M. E. GODDARD and P. M. VISSCHER, 2008 Predicting unobserved phenotypes for complex traits from whole-genome SNP data. PLoS Genet. 4(10): e1000231.
    • (2008) PLoS Genet. , vol.4 , Issue.10
    • Lee, S.H.1    Van Der Werf, J.H.J.2    Hayes, B.J.3    Goddard, M.E.4    Visscher, P.M.5
  • 19
    • 2442597278 scopus 로고    scopus 로고
    • Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data
    • MEUWISSEN, T. H. E., and M. E. GODDARD, 2004 Mapping multiple QTL using linkage disequilibrium and linkage analysis information and multitrait data. Genet. Sel. Evol. 36: 261-279.
    • (2004) Genet. Sel. Evol. , vol.36 , pp. 261-279
    • Meuwissen, T.H.E.1    Goddard, M.E.2
  • 20
    • 0035045051 scopus 로고    scopus 로고
    • Prediction of total genetic value using genome-wide dense marker maps
    • MEUWISSEN, T. H. E., B. J. HAYES and M. E. GODDARD, 2001 Prediction of total genetic value using genome-wide dense marker maps. Genetics 157: 1819-1829.
    • (2001) Genetics , vol.157 , pp. 1819-1829
    • Meuwissen, T.H.E.1    Hayes, B.J.2    Goddard, M.E.3
  • 21
    • 34547555885 scopus 로고    scopus 로고
    • Prediction of coronary heart disease risk using a genetic risk score: The atherosclerosis risk in communities study
    • MORRISON, A. C., L. A. BARE, L. E. CHAMBLESS, S. G. ELLIS, M. MALLOY et al., 2007 Prediction of coronary heart disease risk using a genetic risk score: the atherosclerosis risk in communities study. Am. J. Epidemiol. 166(1): 28-35.
    • (2007) Am. J. Epidemiol. , vol.166 , Issue.1 , pp. 28-35
    • Morrison, A.C.1    Bare, L.A.2    Chambless, L.E.3    Ellis, S.G.4    Malloy, M.5
  • 22
    • 36849052938 scopus 로고    scopus 로고
    • Comparison of genomic and traditional BLUP-estimated breeding value accuracy and selection response under alternative trait and genomic parameters
    • MUIR, W. M., 2007 Comparison of genomic and traditional BLUP-estimated breeding value accuracy and selection response under alternative trait and genomic parameters. J. Anim. Breed. Genet. 124: 342-355.
    • (2007) J. Anim. Breed. Genet. , vol.124 , pp. 342-355
    • Muir, W.M.1
  • 23
    • 0033828761 scopus 로고    scopus 로고
    • Estimate of the mutation rate per nucleotide in humans
    • NACHMAN, M. W., and S. L. CROWELL, 2000 Estimate of the mutation rate per nucleotide in humans. Genetics 156: 297-304.
    • (2000) Genetics , vol.156 , pp. 297-304
    • Nachman, M.W.1    Crowell, S.L.2
  • 24
    • 0033358548 scopus 로고    scopus 로고
    • Use of unlinked genetic markers to detect population stratification in association studies
    • PRITCHARD, J. K., and N. A. ROSENBERG, 1999 Use of unlinked genetic markers to detect population stratification in association studies. Am. J. Hum. Genet. 65: 220-228.
    • (1999) Am. J. Hum. Genet. , vol.65 , pp. 220-228
    • Pritchard, J.K.1    Rosenberg, N.A.2
  • 25
    • 58149333712 scopus 로고    scopus 로고
    • Predicting type 2 diabetes based on polymorphisms from genome-wide association studies: A population- Based study
    • VAN HOEK, M., A. DEHGHAN, J. C. WITTEMAN, C. M. VAN DUIJN, A. G. UITTERLINDEN et al., 2008 Predicting type 2 diabetes based on polymorphisms from genome-wide association studies: a population- based study. Diabetes 57(11): 3122-3128.
    • (2008) Diabetes , vol.57 , Issue.11 , pp. 3122-3128
    • Van Hoek, M.1    Dehghan, A.2    Witteman, J.C.3    Van Duijn, C.M.4    Uitterlinden, A.G.5
  • 27
    • 34948877698 scopus 로고    scopus 로고
    • Prediction of individual genetic risk to disease from genome-wide association studies
    • DOI 10.1101/gr.6665407
    • WRAY, N. R., M. E. GODDARD and P. M. VISSCHER, 2007 Prediction of individual genetic risk to disease from genome-wide association studies. Genome Res. 17: 1520-1528. (Pubitemid 47529436)
    • (2007) Genome Research , vol.17 , Issue.10 , pp. 1520-1528
    • Wray, N.R.1    Goddard, M.E.2    Visscher, P.M.3
  • 28
    • 0037297614 scopus 로고    scopus 로고
    • Estimating polygenic effects using markers of the entire genome
    • XU, S., 2003 Estimating polygenic effects using markers of the entire genome. Genetics 163: 789-801.
    • (2003) Genetics , vol.163 , pp. 789-801
    • Xu, S.1
  • 29
    • 67849114172 scopus 로고    scopus 로고
    • Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: A barley case study
    • ZHONG, S., J. C. M. DEKKERS, R. L. FERNANDO and J.-L. JANNINK, 2009 Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a barley case study. Genetics 182: 355-364.
    • (2009) Genetics , vol.182 , pp. 355-364
    • Zhong, S.1    Dekkers, J.C.M.2    Fernando, R.L.3    Jannink, J.-L.4


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