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Volumn 9, Issue 10, 2014, Pages

Validation of reference housekeeping genes for gene expression studies in Western corn rootworm (Diabrotica virgifera virgifera)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL TOXIN; BETA ACTIN; BETA TUBULIN; DOUBLE STRANDED RNA; ELONGATION FACTOR 1ALPHA; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; RIBOSOMAL PROTEIN S9; RIBOSOME PROTEIN; UNCLASSIFIED DRUG; INSECT PROTEIN;

EID: 84910027935     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0109825     Document Type: Article
Times cited : (63)

References (41)
  • 1
    • 0002048647 scopus 로고
    • Forward
    • Ed. by Krysan JL, Miller TA, SpringerVerlag, New York
    • Metcalf RL (1986) Forward. In: Methods for the study of pest Diabrotica. Ed. by Krysan JL, Miller TA, SpringerVerlag, New York, vii-xv.
    • (1986) Methods for the Study of Pest Diabrotica , pp. vii-xv
    • Metcalf, R.L.1
  • 2
    • 77954067732 scopus 로고    scopus 로고
    • Estimating Diabrotica virgifera virgifera damage functions with field trial data: Applying an unbalanced nested error component model
    • Dun Z, Mitchell PD, Agosti M (2010) Estimating Diabrotica virgifera virgifera damage functions with field trial data: applying an unbalanced nested error component model. J Appl Entomol 134:409-419.
    • (2010) J Appl Entomol , vol.134 , pp. 409-419
    • Dun, Z.1    Mitchell, P.D.2    Agosti, M.3
  • 3
    • 60549083851 scopus 로고    scopus 로고
    • Adaptation and invasiveness of western corn rootworm: Intensifying research on a worsening pest
    • Gray ME, Sappington TW, Miller NJ, Moeser J, Bohn MO (2009) Adaptation and Invasiveness of Western Corn Rootworm: Intensifying Research on a Worsening Pest. Ann Rev Entomol 54:303-321.
    • (2009) Ann Rev Entomol , vol.54 , pp. 303-321
    • Gray, M.E.1    Sappington, T.W.2    Miller, N.J.3    Moeser, J.4    Bohn, M.O.5
  • 4
    • 0026350985 scopus 로고
    • Management of diabroticite rootworms in corn
    • Levine E, Oloumi-Sadeghi H (1991) Management of diabroticite rootworms in corn. Ann Rev Entomol 36:229-255.
    • (1991) Ann Rev Entomol , vol.36 , pp. 229-255
    • Levine, E.1    Oloumi-Sadeghi, H.2
  • 5
    • 0034936591 scopus 로고    scopus 로고
    • Insecticidal proteins from Bacillus thuringiensis protect corn from corn rootworms
    • Moellenbeck DJ, Peters ML, Bing JW, Rouse JR, Higgins LS, et al. (2001) Insecticidal proteins from Bacillus thuringiensis protect corn from corn rootworms. Nat Biotechnol 19:668-672.
    • (2001) Nat Biotechnol , vol.19 , pp. 668-672
    • Moellenbeck, D.J.1    Peters, M.L.2    Bing, J.W.3    Rouse, J.R.4    Higgins, L.S.5
  • 7
    • 84877696684 scopus 로고    scopus 로고
    • Effects of Cry34β5Ab1 corn on the survival and development of western corn rootworm, Diabrotica virgifera virgifera
    • Rudeen ML, Gassmann AJ (2013) Effects of Cry34β5Ab1 corn on the survival and development of western corn rootworm, Diabrotica virgifera virgifera. Pest Manag Sci 69:709-716.
    • (2013) Pest Manag Sci , vol.69 , pp. 709-716
    • Rudeen, M.L.1    Gassmann, A.J.2
  • 8
    • 77955312533 scopus 로고    scopus 로고
    • Discovery and characterization of field resistance to Bt maize: Spodoptera frugiperda (Lepidoptera: Noctuidae) in Puerto Rico
    • Storer NP, Babcock JM, Schlenz M, Meade T, Thompson GD, et al. (2010) Discovery and characterization of field resistance to Bt maize: Spodoptera frugiperda (Lepidoptera: Noctuidae) in Puerto Rico. J Econ Entomol 103:1031-1038.
    • (2010) J Econ Entomol , vol.103 , pp. 1031-1038
    • Storer, N.P.1    Babcock, J.M.2    Schlenz, M.3    Meade, T.4    Thompson, G.D.5
  • 9
    • 35649020475 scopus 로고    scopus 로고
    • First reports of field resistance by the stem borer, Busseola fusca (Fuller) to Bt-transgenic maize
    • Van Rensburg JBJ (2007) First reports of field resistance by the stem borer, Busseola fusca (Fuller) to Bt-transgenic maize. S Afr J Plant Soil 24:147-151.
    • (2007) S Afr J Plant Soil , vol.24 , pp. 147-151
    • Van Rensburg, J.1
  • 10
    • 84864768408 scopus 로고    scopus 로고
    • Evaluation of reference genes for gene expression studies in radish (Raphanus sativus L.) using quantitative real-time PCR
    • Xu YY, Zhu XW, Gong YQ, Xu L, Wang Y, et al. (2012) Evaluation of reference genes for gene expression studies in radish (Raphanus sativus L.) using quantitative real-time PCR. Biochem and Biophys Res Commun 424:398-403.
    • (2012) Biochem and Biophys Res Commun , vol.424 , pp. 398-403
    • Xu, Y.Y.1    Zhu, X.W.2    Gong, Y.Q.3    Xu, L.4    Wang, Y.5
  • 12
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, et al. (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3: RESEARCH0034.
    • (2002) Genome Biol , vol.3 , pp. 34
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5
  • 13
    • 77956767010 scopus 로고    scopus 로고
    • Developments in real-time PCR research and molecular diagnostics
    • Bustin SA (2010) Developments in real-time PCR research and molecular diagnostics. Expert Rev Mol Diagn 10:713-715.
    • (2010) Expert Rev Mol Diagn , vol.10 , pp. 713-715
    • Bustin, S.A.1
  • 15
    • 82155186096 scopus 로고    scopus 로고
    • Identification of superior reference genes for data normalisation of expression studies via quantitative PCR in hybrid roses (Rosa hybrida)
    • Klie M, Debener T (2011) Identification of superior reference genes for data normalisation of expression studies via quantitative PCR in hybrid roses (Rosa hybrida). BMC Res Notes 4:518. doi: 10.1186/1756-0500-4-518.
    • (2011) BMC Res Notes , vol.4 , pp. 518
    • Klie, M.1    Debener, T.2
  • 16
    • 84865202759 scopus 로고    scopus 로고
    • Validation of reference genes for gene expression studies in Aphis glycines (Hemiptera: Aphididae)
    • Bansal R, Mamidala P, Mian MAR, Mittapalli O, Michel AP (2012) Validation of Reference Genes for Gene Expression Studies in Aphis glycines (Hemiptera: Aphididae). J Econ Entomol 105:1432-1438.
    • (2012) J Econ Entomol , vol.105 , pp. 1432-1438
    • Bansal, R.1    Mamidala, P.2    Mian, M.A.R.3    Mittapalli, O.4    Michel, A.P.5
  • 17
    • 63949087857 scopus 로고    scopus 로고
    • Evaluation of coffee reference genes for relative expression studies by quantitative real-time RT-PCR
    • Cruz F, Kalaoun S, Nobile P, Colombo C, Almeida J, et al. (2009) Evaluation of coffee reference genes for relative expression studies by quantitative real-time RT-PCR. Mol Breed 23:607-616.
    • (2009) Mol Breed , vol.23 , pp. 607-616
    • Cruz, F.1    Kalaoun, S.2    Nobile, P.3    Colombo, C.4    Almeida, J.5
  • 18
    • 58849120561 scopus 로고    scopus 로고
    • Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions
    • Barsalobres-Cavallari CF, Severino FE, Maluf MP, Maia IG (2009) Identification of suitable internal control genes for expression studies in Coffea arabica under different experimental conditions. BMC Mol Biol 10:1. doi: 10.1186/1471-2199-10-1.
    • (2009) BMC Mol Biol , vol.10 , pp. 1
    • Barsalobres-Cavallari, C.F.1    Severino, F.E.2    Maluf, M.P.3    Maia, I.G.4
  • 19
    • 47249141242 scopus 로고    scopus 로고
    • The lack of a systematic validation of reference genes: A serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants
    • Gutierrez L, Mauriat M, Guenin S, Pelloux J, Lefebvre JF, et al. (2008) The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants. Plant Biotechnol J 6:609-618.
    • (2008) Plant Biotechnol J , vol.6 , pp. 609-618
    • Gutierrez, L.1    Mauriat, M.2    Guenin, S.3    Pelloux, J.4    Lefebvre, J.F.5
  • 20
    • 84874572580 scopus 로고    scopus 로고
    • Validation of reference genes in solenopsis invicta in different developmental stages, castes and tissues
    • Cheng D, Zhang Z, He X, Liang G (2013) Validation of Reference Genes in Solenopsis invicta in Different Developmental Stages, Castes and Tissues. PLoS ONE 8(2):e57718. doi:10.1371/journal.pone.0057718.
    • (2013) PLoS ONE , vol.8 , Issue.2 , pp. e57718
    • Cheng, D.1    Zhang, Z.2    He, X.3    Liang, G.4
  • 21
    • 84872191172 scopus 로고    scopus 로고
    • Reference gene selection for qRT-PCR analysis in the sweetpotato whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae)
    • Li R, Xie W, Wang S, Wu Q, Yang N, et al. (2013) Reference Gene Selection for qRT-PCR Analysis in the Sweetpotato Whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae). PLoS ONE 8(1):e53006. doi:10.1371/journal.pone.0053006.
    • (2013) PLoS ONE , vol.8 , Issue.1 , pp. e53006
    • Li, R.1    Xie, W.2    Wang, S.3    Wu, Q.4    Yang, N.5
  • 22
    • 34548491164 scopus 로고    scopus 로고
    • Actin, a reliable marker of internal control?
    • Ruan W, Lai M (2007) Actin, a reliable marker of internal control? Clin Chim Acta 385(1-2):1-5.
    • (2007) Clin Chim Acta , vol.385 , Issue.1-2 , pp. 1-5
    • Ruan, W.1    Lai, M.2
  • 23
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • Andersen CL, Jensen JL, Orntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64:5245-5250.
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 24
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
    • Pfaffil MW, Tichopad A, Prgomet C, Neuvians TP (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations. Biotechnol Lett 26:509-515.
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffil, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 25
    • 33750295976 scopus 로고    scopus 로고
    • Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR
    • Silver N, Best S, Jiang J, Thein SL (2006) Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR. BMC Mol Biol 7.
    • (2006) BMC Mol Biol , pp. 7
    • Silver, N.1    Best, S.2    Jiang, J.3    Thein, S.L.4
  • 26
  • 27
    • 84858025331 scopus 로고    scopus 로고
    • Validation of RNA interference in western corn rootworm, Diabrotica virgifera virgifera (Coleoptera: Chrysomelidae) adults
    • Rangasamy M, Siegfried BD (2011) Validation of RNA interference in western corn rootworm, Diabrotica virgifera virgifera (Coleoptera: Chrysomelidae) adults. Pest Manag Sci 68:587-591.
    • (2011) Pest Manag Sci , vol.68 , pp. 587-591
    • Rangasamy, M.1    Siegfried, B.D.2
  • 28
    • 0036195477 scopus 로고    scopus 로고
    • Novel bacillus thuringiensis binary insecticidal crystal proteins active on western corn rootworm, diabrotica virgifera virgifera leconte
    • Ellis RT, Stockhoff BA, Stamp L, Schnepf HE, Schwab GE, et al. (2002) Novel Bacillus thuringiensis Binary Insecticidal Crystal Proteins Active on Western Corn Rootworm, Diabrotica virgifera virgifera LeConte. Appl Environ Microbiol 68(3):1137-1145.
    • (2002) Appl Environ Microbiol , vol.68 , Issue.3 , pp. 1137-1145
    • Ellis, R.T.1    Stockhoff, B.A.2    Stamp, L.3    Schnepf, H.E.4    Schwab, G.E.5
  • 29
    • 80555154263 scopus 로고    scopus 로고
    • Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database
    • Xie F, Sun G, Stiller JW, Zhang B (2011) Genome-Wide Functional Analysis of the Cotton Transcriptome by Creating an Integrated EST Database. PLoS ONE 6(11):e26980. doi:10.1371/journal.pone.0026980.
    • (2011) PLoS ONE , vol.6 , Issue.11 , pp. e26980
    • Xie, F.1    Sun, G.2    Stiller, J.W.3    Zhang, B.4
  • 30
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2 (-Delta Delta C (T)) Method
    • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2 (-Delta Delta C (T)) Method. Methods 25:402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 31
    • 84861934932 scopus 로고    scopus 로고
    • Identification of valid housekeeping genes for quantitative RT-PCR analysis of cardiosphere-derived cells preconditioned under hypoxia or with prolyl-4-hydroxylase inhibitors
    • Tan SC, Carr CA, Yeoh KK, Schofield CJ, Davies KE, et al. (2011) Identification of valid housekeeping genes for quantitative RT-PCR analysis of cardiosphere-derived cells preconditioned under hypoxia or with prolyl-4-hydroxylase inhibitors. Mol Biol Rep 39:4857-4867.
    • (2011) Mol Biol Rep , vol.39 , pp. 4857-4867
    • Tan, S.C.1    Carr, C.A.2    Yeoh, K.K.3    Schofield, C.J.4    Davies, K.E.5
  • 32
    • 79960685213 scopus 로고    scopus 로고
    • Evaluation and identification of reliable reference genes for pharmacogenomics, toxicogenomics, and small RNA expression analysis
    • Chen DL, Pan XP, Xiao P, Farwell MA, Zhang BH (2011) Evaluation and Identification of Reliable Reference Genes for Pharmacogenomics, Toxicogenomics, and Small RNA Expression Analysis. J Cell Physiol 226:2469-2477.
    • (2011) J Cell Physiol , vol.226 , pp. 2469-2477
    • Chen, D.L.1    Pan, X.P.2    Xiao, P.3    Farwell, M.A.4    Zhang, B.H.5
  • 33
    • 71749096010 scopus 로고    scopus 로고
    • Selection of reference genes for real-time polymerase chain reaction analysis in tissues from Bombus terrestris and Bombus lucorum of different ages
    • Hornakova D, Matouskova P, Kindl J, Valterova I, Pichova I (2010) Selection of reference genes for real-time polymerase chain reaction analysis in tissues from Bombus terrestris and Bombus lucorum of different ages. Anal Biochem 397:118-120.
    • (2010) Anal Biochem , vol.397 , pp. 118-120
    • Hornakova, D.1    Matouskova, P.2    Kindl, J.3    Valterova, I.4    Pichova, I.5
  • 34
    • 79951552732 scopus 로고    scopus 로고
    • Assessment and validation of a suite of reverse transcription-quantitative PCR reference genes for analyses of density-dependent behavioural plasticity in the Australian plague locust
    • Chapuis MP, Tohidi-Esfahani D, Dodgson T, Blondin L, Ponton F, et al. (2011) Assessment and validation of a suite of reverse transcription-quantitative PCR reference genes for analyses of density-dependent behavioural plasticity in the Australian plague locust. BMC Mol Biol 6:7. doi: 10.1186/1471-2199-12-7.
    • (2011) BMC Mol Biol , vol.6 , pp. 7
    • Chapuis, M.P.1    Tohidi-Esfahani, D.2    Dodgson, T.3    Blondin, L.4    Ponton, F.5
  • 35
    • 67649439170 scopus 로고    scopus 로고
    • Identification and validation of housekeeping genes in brains of the desert locust Schistocerca gregaria under different developmental conditions
    • Hiel MBV, Wielendaele PV, Temmerman L, Soest SV, Vuerinckx K, et al. (2009) Identification and validation of housekeeping genes in brains of the desert locust Schistocerca gregaria under different developmental conditions. BMC Mol Biol 10:56. doi: 10.1186/1471-2199-10-56.
    • (2009) BMC Mol Biol , vol.10 , pp. 56
    • Hiel, M.B.V.1    Wielendaele, P.V.2    Temmerman, L.3    Soest, S.V.4    Vuerinckx, K.5
  • 36
    • 44449101750 scopus 로고    scopus 로고
    • Validation of reference genes for gene expression studies in the honey bee, Apis mellifera, by quantitative real-time RT-PCR
    • Lourenço AP, Mackert A, Cristino AS, Simões ZLP (2008) Validation of reference genes for gene expression studies in the honey bee, Apis mellifera, by quantitative real-time RT-PCR. Apidologie 39:372-385.
    • (2008) Apidologie , vol.39 , pp. 372-385
    • Lourenço, A.P.1    Mackert, A.2    Cristino, A.S.3    Simões, Z.L.P.4
  • 37
    • 79959193129 scopus 로고    scopus 로고
    • Reference gene selection for gene expression studies using RT-qPCR in virusinfected planthoppers
    • Maroniche GA, Sagadin M, Mongelli VC, Truol GA, del Vas M (2011) Reference gene selection for gene expression studies using RT-qPCR in virusinfected planthoppers. Virol J 8. 308.
    • (2011) Virol J , vol.8 , pp. 308
    • Maroniche, G.A.1    Sagadin, M.2    Mongelli, V.C.3    Truol, G.A.4    Vas, M.D.5
  • 38
    • 43449117490 scopus 로고    scopus 로고
    • Reference gene selection for insect expression studies using quantitative real-time PCR: The head of the honeybee, Apis mellifera, after a bacterial challenge
    • Scharlaken B, de Graaf DC, Goossens K, Brunain M, Peelman LJ, et al. (2008) Reference gene selection for insect expression studies using quantitative real-time PCR: The head of the honeybee, Apis mellifera, after a bacterial challenge. J Insect Sci 8. 33. doi: 10.1673/031.008.3301.
    • (2008) J Insect Sci , vol.8 , pp. 33
    • Scharlaken, B.1    De Graaf, D.C.2    Goossens, K.3    Brunain, M.4    Peelman, L.J.5
  • 39
    • 67650917116 scopus 로고    scopus 로고
    • Reference genes for qRT-PCR tested under various stress conditions in Folsomia candida and Orchesella cincta (Insecta, Collembola)
    • de Boer ME, de Boer TE, Marien J, Timmermans M, Nota B, et al. (2009) Reference genes for qRT-PCR tested under various stress conditions in Folsomia candida and Orchesella cincta (Insecta, Collembola). BMC Mol Biol 10:54. doi: 10.1186/1471-2199-10-54.
    • (2009) BMC Mol Biol , vol.10 , pp. 54
    • De Boer, M.E.1    De Boer, T.E.2    Marien, J.3    Timmermans, M.4    Nota, B.5
  • 40
    • 84856423281 scopus 로고    scopus 로고
    • Validation of reference genes for gene expression studies in the emerald ash borer (Agrilus planipennis)
    • Rajarapu SP, Mamidala P, Mittapalli O (2012) Validation of reference genes for gene expression studies in the emerald ash borer (Agrilus planipennis). Insect Sci 19:41-46.
    • (2012) Insect Sci , vol.19 , pp. 41-46
    • Rajarapu, S.P.1    Mamidala, P.2    Mittapalli, O.3
  • 41
    • 74449086131 scopus 로고    scopus 로고
    • Evaluation of quantitative PCR reference genes for gene expression studies in Tribolium castaneum after fungal challenge
    • Lord JC, Hartzer K, Toutges M, Oppert B (2010) Evaluation of quantitative PCR reference genes for gene expression studies in Tribolium castaneum after fungal challenge. J Microbiol Methods 80:219-221.
    • (2010) J Microbiol Methods , vol.80 , pp. 219-221
    • Lord, J.C.1    Hartzer, K.2    Toutges, M.3    Oppert, B.4


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