메뉴 건너뛰기




Volumn 9, Issue 10, 2014, Pages

Development of TaqMan-based quantitative PCR for sensitive and selective detection of toxigenic clostridium difficile in human stools

Author keywords

[No Author keywords available]

Indexed keywords

AGED; ARTICLE; BACTERIAL STRAIN; BACTERIUM DETECTION; BACTERIUM ISOLATE; CLOSTRIDIUM; CLOSTRIDIUM BIFERMENTANS; CLOSTRIDIUM DIFFICILE; CLOSTRIDIUM HISTOLYTICUM; CLOSTRIDIUM INNOCUUM; CLOSTRIDIUM NOVYI; CLOSTRIDIUM PERFRINGENS; CLOSTRIDIUM RAMOSUM; CLOSTRIDIUM SEPTICUM; CLOSTRIDIUM SORDELLII; CLOSTRIDIUM SPHENOIDES; CLOSTRIDIUM TERTIUM; CONTROLLED STUDY; FECES ANALYSIS; FEMALE; GENE SEQUENCE; GENE TARGETING; HOME FOR THE AGED; LIMIT OF DETECTION; MALE; MEASUREMENT ACCURACY; NONHUMAN; NUCLEOTIDE SEQUENCE; QUALITATIVE VALIDITY; REAL TIME POLYMERASE CHAIN REACTION; SENSITIVITY ANALYSIS; TAQMAN BASED QUANTITATIVE POLYMERASE CHAIN REACTION; BACTERIAL GENE; FECES; GENETICS; HUMAN; IMMUNOASSAY; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; NURSING HOME; PEPTOCLOSTRIDIUM DIFFICILE; PROCEDURES; VERY ELDERLY;

EID: 84910020648     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0111684     Document Type: Article
Times cited : (28)

References (35)
  • 1
    • 67649391053 scopus 로고    scopus 로고
    • Clostridium difficile infection: New developments in epidemiology and pathogenesis
    • Rupnik M, Wilcox MH, Gerding DN (2009) Clostridium difficile infection: new developments in epidemiology and pathogenesis. Nat Rev Microbiol 7: 526-536.
    • (2009) Nat Rev Microbiol , vol.7 , pp. 526-536
    • Rupnik, M.1    Wilcox, M.H.2    Gerding, D.N.3
  • 3
    • 77954426719 scopus 로고    scopus 로고
    • Asymptomatic carriage of Clostridium difficile in an Irish continuing care institution for the elderly: Prevalence and characteristics
    • Ryan J, Murphy C, Twomey C, Paul Ross R, Rea MC, et al. (2010) Asymptomatic carriage of Clostridium difficile in an Irish continuing care institution for the elderly: prevalence and characteristics. Ir J Med Sci 179: 245-250.
    • (2010) Ir J Med Sci , vol.179 , pp. 245-250
    • Ryan, J.1    Murphy, C.2    Twomey, C.3    Paul Ross, R.4    Rea, M.C.5
  • 4
    • 0038489184 scopus 로고    scopus 로고
    • Prevalence of asymptomatic Clostridium difficile colonization in a nursing home population: A cross-sectional study
    • Rivera EV, Woods S (2003) Prevalence of asymptomatic Clostridium difficile colonization in a nursing home population: a cross-sectional study. J Gend Specif Med 6: 27-30.
    • (2003) J Gend Specif Med , vol.6 , pp. 27-30
    • Rivera, E.V.1    Woods, S.2
  • 5
    • 34848846245 scopus 로고    scopus 로고
    • Asymptomatic carriers are a potential source for transmission of epidemic and nonepidemic Clostridium difficile strains among long-term care facility residents
    • Riggs MM, Sethi AK, Zabarsky TF, Eckstein EC, Jump RL, et al. (2007) Asymptomatic carriers are a potential source for transmission of epidemic and nonepidemic Clostridium difficile strains among long-term care facility residents. Clin Infect Dis 45: 992-998.
    • (2007) Clin Infect Dis , vol.45 , pp. 992-998
    • Riggs, M.M.1    Sethi, A.K.2    Zabarsky, T.F.3    Eckstein, E.C.4    Jump, R.L.5
  • 7
    • 0036263387 scopus 로고    scopus 로고
    • Development and evaluation of a PCR method for detection of the Clostridium difficile toxin B gene in stool specimens
    • Guilbault C, Labbe AC, Poirier L, Busque L, Beliveau C, et al. (2002) Development and evaluation of a PCR method for detection of the Clostridium difficile toxin B gene in stool specimens. J Clin Microbiol 40: 2288-2290.
    • (2002) J Clin Microbiol , vol.40 , pp. 2288-2290
    • Guilbault, C.1    Labbe, A.C.2    Poirier, L.3    Busque, L.4    Beliveau, C.5
  • 8
    • 35348821180 scopus 로고    scopus 로고
    • Detection of toxigenic Clostridium difficile in stool samples by real-time polymerase chain reaction for the diagnosis of C. difficile-associated diarrhea
    • Peterson LR, Manson RU, Paule SM, Hacek DM, Robicsek A, et al. (2007) Detection of toxigenic Clostridium difficile in stool samples by real-time polymerase chain reaction for the diagnosis of C. difficile-associated diarrhea. Clin Infect Dis 45: 1152-1160.
    • (2007) Clin Infect Dis , vol.45 , pp. 1152-1160
    • Peterson, L.R.1    Manson, R.U.2    Paule, S.M.3    Hacek, D.M.4    Robicsek, A.5
  • 9
    • 45149121464 scopus 로고    scopus 로고
    • Comparison of real-time PCR for detection of the tcdC gene with four toxin immunoassays and culture in diagnosis of Clostridium difficile infection
    • Sloan LM, Duresko BJ, Gustafson DR, Rosenblatt JE (2008) Comparison of real-time PCR for detection of the tcdC gene with four toxin immunoassays and culture in diagnosis of Clostridium difficile infection. J Clin Microbiol 46: 1996-2001.
    • (2008) J Clin Microbiol , vol.46 , pp. 1996-2001
    • Sloan, L.M.1    Duresko, B.J.2    Gustafson, D.R.3    Rosenblatt, J.E.4
  • 10
    • 84858603395 scopus 로고    scopus 로고
    • Detection of toxigenic Clostridium difficile: Comparison of the cell culture neutralization, Xpert C. difficile, Xpert C. difficile/Epi, and Illumigene C. difficile assays
    • Pancholi P, Kelly C, Raczkowski M, Balada-Llasat JM (2012) Detection of toxigenic Clostridium difficile: comparison of the cell culture neutralization, Xpert C. difficile, Xpert C. difficile/Epi, and Illumigene C. difficile assays. J Clin Microbiol 50: 1331-1335.
    • (2012) J Clin Microbiol , vol.50 , pp. 1331-1335
    • Pancholi, P.1    Kelly, C.2    Raczkowski, M.3    Balada-Llasat, J.M.4
  • 11
    • 70449644511 scopus 로고    scopus 로고
    • Comparison of a commercial multiplex real-time PCR to the cell cytotoxicity neutralization assay for diagnosis of clostridium difficile infections
    • Huang H, Weintraub A, Fang H, Nord CE (2009) Comparison of a commercial multiplex real-time PCR to the cell cytotoxicity neutralization assay for diagnosis of clostridium difficile infections. J Clin Microbiol 47: 3729-3731.
    • (2009) J Clin Microbiol , vol.47 , pp. 3729-3731
    • Huang, H.1    Weintraub, A.2    Fang, H.3    Nord, C.E.4
  • 12
    • 84886508083 scopus 로고    scopus 로고
    • Correlation between Clostridium difficile Bacterial Load, Commercial Real-time PCR Cycle Thresholds, and Results of Diagnostic Tests Based on Enzyme Immunoassay and Cell-Culture Cytotoxicity Assay
    • Dionne LL, Raymond F, Corbeil J, Longtin J, Gervais P, et al. (2013) Correlation between Clostridium difficile Bacterial Load, Commercial Real-time PCR Cycle Thresholds, and Results of Diagnostic Tests Based on Enzyme Immunoassay and Cell-Culture Cytotoxicity Assay. J Clin Microbiol 51: 3624-3630.
    • (2013) J Clin Microbiol , vol.51 , pp. 3624-3630
    • Dionne, L.L.1    Raymond, F.2    Corbeil, J.3    Longtin, J.4    Gervais, P.5
  • 13
    • 0032782895 scopus 로고    scopus 로고
    • Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria
    • Jansen GJ, Wildeboer-Veloo AC, Tonk RH, Franks AH, Welling GW (1999) Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria. J Microbiol Methods 37: 215-221.
    • (1999) J Microbiol Methods , vol.37 , pp. 215-221
    • Jansen, G.J.1    Wildeboer-Veloo, A.C.2    Tonk, R.H.3    Franks, A.H.4    Welling, G.W.5
  • 14
    • 79958027409 scopus 로고    scopus 로고
    • Clostridium difficile isolation and culture techniques
    • Wren M (2010) Clostridium difficile isolation and culture techniques. Methods Mol Biol 646: 39-52.
    • (2010) Methods Mol Biol , vol.646 , pp. 39-52
    • Wren, M.1
  • 15
    • 0031903191 scopus 로고    scopus 로고
    • Identification of toxin A-negative, toxin B-positive Clostridium difficile by PCR
    • Kato H, Kato N, Watanabe K, Iwai N, Nakamura H, et al. (1998) Identification of toxin A-negative, toxin B-positive Clostridium difficile by PCR. J Clin Microbiol 36: 2178-2182.
    • (1998) J Clin Microbiol , vol.36 , pp. 2178-2182
    • Kato, H.1    Kato, N.2    Watanabe, K.3    Iwai, N.4    Nakamura, H.5
  • 16
    • 15544388831 scopus 로고    scopus 로고
    • Detection of binary-toxin genes (cdtA and cdtB) among Clostridium difficile strains isolated from patients with C. difficile-associated diarrhoea (CDAD) in Poland
    • Pituch H, Rupnik M, Obuch-Woszczatynski P, Grubesic A, Meisel-Mikolajczyk F, et al. (2005) Detection of binary-toxin genes (cdtA and cdtB) among Clostridium difficile strains isolated from patients with C. difficile-associated diarrhoea (CDAD) in Poland. J Med Microbiol 54: 143-147.
    • (2005) J Med Microbiol , vol.54 , pp. 143-147
    • Pituch, H.1    Rupnik, M.2    Obuch-Woszczatynski, P.3    Grubesic, A.4    Meisel-Mikolajczyk, F.5
  • 17
    • 0033796981 scopus 로고    scopus 로고
    • Toxin gene analysis of a variant strain of Clostridium difficile that causes human clinical disease
    • Sambol SP, Merrigan MM, Lyerly D, Gerding DN, Johnson S (2000) Toxin gene analysis of a variant strain of Clostridium difficile that causes human clinical disease. Infect Immun 68: 5480-5487.
    • (2000) Infect Immun , vol.68 , pp. 5480-5487
    • Sambol, S.P.1    Merrigan, M.M.2    Lyerly, D.3    Gerding, D.N.4    Johnson, S.5
  • 18
    • 0032809943 scopus 로고    scopus 로고
    • Deletions in the repeating sequences of the toxin A gene of toxin A-negative, toxin B-positive Clostridium difficile strains
    • Kato H, Kato N, Katow S, Maegawa T, Nakamura S, et al. (1999) Deletions in the repeating sequences of the toxin A gene of toxin A-negative, toxin B-positive Clostridium difficile strains. FEMS Microbiol Lett 175: 197-203.
    • (1999) FEMS Microbiol Lett , vol.175 , pp. 197-203
    • Kato, H.1    Kato, N.2    Katow, S.3    Maegawa, T.4    Nakamura, S.5
  • 19
    • 42149172381 scopus 로고    scopus 로고
    • Heterogeneity of large clostridial toxins: Importance of Clostridium difficile toxinotypes
    • Rupnik M (2008) Heterogeneity of large clostridial toxins: importance of Clostridium difficile toxinotypes. FEMS Microbiol Rev 32: 541-555.
    • (2008) FEMS Microbiol Rev , vol.32 , pp. 541-555
    • Rupnik, M.1
  • 20
    • 10844293286 scopus 로고    scopus 로고
    • Multiplex PCR targeting tpi (triose phosphate isomerase), tcdA (Toxin A), and tcdB (Toxin B) genes for toxigenic culture of Clostridium difficile
    • Lemee L, Dhalluin A, Testelin S, Mattrat MA, Maillard K, et al. (2004) Multiplex PCR targeting tpi (triose phosphate isomerase), tcdA (Toxin A), and tcdB (Toxin B) genes for toxigenic culture of Clostridium difficile. J Clin Microbiol 42: 5710-5714.
    • (2004) J Clin Microbiol , vol.42 , pp. 5710-5714
    • Lemee, L.1    Dhalluin, A.2    Testelin, S.3    Mattrat, M.A.4    Maillard, K.5
  • 21
    • 77953752228 scopus 로고    scopus 로고
    • Real-time multiplex polymerase chain reaction assay for rapid detection of Clostridium difficile toxin-encoding strains
    • Houser BA, Hattel AL, Jayarao BM (2010) Real-time multiplex polymerase chain reaction assay for rapid detection of Clostridium difficile toxin-encoding strains. Foodborne Pathog Dis 7: 719-726.
    • (2010) Foodborne Pathog Dis , vol.7 , pp. 719-726
    • Houser, B.A.1    Hattel, A.L.2    Jayarao, B.M.3
  • 22
    • 0033042880 scopus 로고    scopus 로고
    • Rapid detection of toxigenic Clostridium difficile from stool samples by a nested PCR of toxin B gene
    • Alonso R, Munoz C, Gros S, Garcia de Viedma D, Pelaez T, et al. (1999) Rapid detection of toxigenic Clostridium difficile from stool samples by a nested PCR of toxin B gene. J Hosp Infect 41: 145-149.
    • (1999) J Hosp Infect , vol.41 , pp. 145-149
    • Alonso, R.1    Munoz, C.2    Gros, S.3    Garcia De Viedma, D.4    Pelaez, T.5
  • 23
    • 84866180610 scopus 로고    scopus 로고
    • Sensitive quantification of Clostridium difficile cells by reverse transcription-quantitative PCR targeting rRNA molecules
    • Matsuda K, Tsuji H, Asahara T, Takahashi T, Kubota H, et al. (2012) Sensitive quantification of Clostridium difficile cells by reverse transcription-quantitative PCR targeting rRNA molecules. Appl Environ Microbiol 78: 5111-5118.
    • (2012) Appl Environ Microbiol , vol.78 , pp. 5111-5118
    • Matsuda, K.1    Tsuji, H.2    Asahara, T.3    Takahashi, T.4    Kubota, H.5
  • 24
    • 33846136980 scopus 로고    scopus 로고
    • Sensitive quantitative detection of commensal bacteria by rRNA-targeted reverse transcription-PCR
    • Matsuda K, Tsuji H, Asahara T, Kado Y, Nomoto K (2007) Sensitive quantitative detection of commensal bacteria by rRNA-targeted reverse transcription-PCR. Appl Environ Microbiol 73: 32-39.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 32-39
    • Matsuda, K.1    Tsuji, H.2    Asahara, T.3    Kado, Y.4    Nomoto, K.5
  • 25
    • 63849243189 scopus 로고    scopus 로고
    • Establishment of an analytical system for the human fecal microbiota, based on reverse transcription-quantitative PCR targeting of multicopy rRNA molecules
    • Matsuda K, Tsuji H, Asahara T, Matsumoto K, Takada T, et al. (2009) Establishment of an analytical system for the human fecal microbiota, based on reverse transcription-quantitative PCR targeting of multicopy rRNA molecules. Appl Environ Microbiol 75: 1961-1969.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 1961-1969
    • Matsuda, K.1    Tsuji, H.2    Asahara, T.3    Matsumoto, K.4    Takada, T.5
  • 26
    • 13544254304 scopus 로고    scopus 로고
    • Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples
    • Rudi K, Moen B, Dromtorp SM, Holck AL (2005) Use of ethidium monoazide and PCR in combination for quantification of viable and dead cells in complex samples. Appl Environ Microbiol 71: 1018-1024.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1018-1024
    • Rudi, K.1    Moen, B.2    Dromtorp, S.M.3    Holck, A.L.4
  • 27
    • 33748746842 scopus 로고    scopus 로고
    • Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. Dead bacteria by selective removal of DNA from dead cells
    • Nocker A, Cheung CY, Camper AK (2006) Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells. J Microbiol Methods 67: 310-320.
    • (2006) J Microbiol Methods , vol.67 , pp. 310-320
    • Nocker, A.1    Cheung, C.Y.2    Camper, A.K.3
  • 28
    • 3142680740 scopus 로고    scopus 로고
    • Clostridium difficile-associated diarrhea in adults
    • Poutanen SM, Simor AE (2004) Clostridium difficile-associated diarrhea in adults. CMAJ 171: 51-58.
    • (2004) CMAJ , vol.171 , pp. 51-58
    • Poutanen, S.M.1    Simor, A.E.2
  • 29
    • 84855713138 scopus 로고    scopus 로고
    • High prevalence of Clostridium difficile colonization among nursing home residents in Hesse, Germany
    • Arvand M, Moser V, Schwehn C, Bettge-Weller G, Hensgens MP, et al. (2012) High prevalence of Clostridium difficile colonization among nursing home residents in Hesse, Germany. PLoS One 7: e30183.
    • (2012) PLoS One , vol.7 , pp. e30183
    • Arvand, M.1    Moser, V.2    Schwehn, C.3    Bettge-Weller, G.4    Hensgens, M.P.5
  • 30
    • 0027327788 scopus 로고
    • Clostridium difficile colonization in residents of long-term care facilities: Prevalence and risk factors
    • Walker KJ, Gilliland SS, Vance-Bryan K, Moody JA, Larsson AJ, et al. (1993) Clostridium difficile colonization in residents of long-term care facilities: prevalence and risk factors. J Am Geriatr Soc 41: 940-946.
    • (1993) J Am Geriatr Soc , vol.41 , pp. 940-946
    • Walker, K.J.1    Gilliland, S.S.2    Vance-Bryan, K.3    Moody, J.A.4    Larsson, A.J.5
  • 31
    • 77955233611 scopus 로고    scopus 로고
    • Diagnosis, management, and prevention of Clostridium difficile infection in long-term care facilities: A review
    • Simor AE (2010) Diagnosis, management, and prevention of Clostridium difficile infection in long-term care facilities: a review. J Am Geriatr Soc 58: 1556-1564.
    • (2010) J Am Geriatr Soc , vol.58 , pp. 1556-1564
    • Simor, A.E.1
  • 32
    • 39749111479 scopus 로고    scopus 로고
    • Measures to control and prevent Clostridium difficile infection
    • Gerding DN, Muto CA, Owens RC Jr (2008) Measures to control and prevent Clostridium difficile infection. Clin Infect Dis 46 Suppl 1: S43-49.
    • (2008) Clin Infect Dis , vol.46 , pp. S43-S49
    • Gerding, D.N.1    Muto, C.A.2    Owens, R.C.3
  • 33
    • 34249946113 scopus 로고    scopus 로고
    • Clostridium difficile in the long-term care setting
    • Makris AT, Gelone S (2007) Clostridium difficile in the long-term care setting. J Am Med Dir Assoc 8: 290-299.
    • (2007) J Am Med Dir Assoc , vol.8 , pp. 290-299
    • Makris, A.T.1    Gelone, S.2
  • 34
    • 0031926083 scopus 로고    scopus 로고
    • Clostridium difficile-associated diarrhea
    • quiz 1035-1026
    • Johnson S, Gerding DN (1998) Clostridium difficile-associated diarrhea. Clin Infect Dis 26: 1027-1034; quiz 1035-1026.
    • (1998) Clin Infect Dis , vol.26 , pp. 1027-1034
    • Johnson, S.1    Gerding, D.N.2
  • 35
    • 80053492519 scopus 로고    scopus 로고
    • Quantification of Clostridium difficile in antibiotic-associated-diarrhea patients
    • Naaber P, Stsepetova J, Smidt I, Ratsep M, Koljalg S, et al. (2011) Quantification of Clostridium difficile in antibiotic-associated-diarrhea patients. J Clin Microbiol 49: 3656-3658.
    • (2011) J Clin Microbiol , vol.49 , pp. 3656-3658
    • Naaber, P.1    Stsepetova, J.2    Smidt, I.3    Ratsep, M.4    Koljalg, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.