Molecular science for drug development and biomedicine

International Journal of Molecular Sciences

Volumn 15, Issue 11, 2014, Pages 20072-20078

  Zhong, Wei Zhu ^a   Zhou, Shu Feng ^b  

^a GORDON LIFE SCIENCE INSTITUTE   (United States)

^b UNIVERSITY OF SOUTH FLORIDA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMYLOID BETA PROTEIN; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MITOGEN ACTIVATED PROTEIN KINASE; OLIGONUCLEOTIDE; PHOSPHOLIPASE A2; AMINO ACID;

AMINO ACID COMPOSITION; BINDING AFFINITY; BIOLOGICAL ACTIVITY; BIOMEDICINE; CELL MIGRATION; CELL PROLIFERATION; DNA SEQUENCE; DRUG DESIGN; EDITORIAL; HUMAN; LUNG INJURY; NEUROPROTECTION; NITROSYLATION; PROTEIN EXPRESSION; PROTEIN INTERACTION; PROTEIN PROCESSING; RNA SEQUENCE; SEQUENCE ANALYSIS; SIGNAL TRANSDUCTION; STRUCTURE ANALYSIS; WOUND HEALING; X RAY CRYSTALLOGRAPHY; ANIMAL; CHEMICAL STRUCTURE; CHEMISTRY; DRUG DEVELOPMENT; MEDICAL RESEARCH; RAT; STRUCTURE ACTIVITY RELATION;

AMINO ACIDS; ANIMALS; BIOMEDICAL RESEARCH; DRUG DISCOVERY; HUMANS; MODELS, MOLECULAR; OLIGONUCLEOTIDES; RATS; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 84908544636     PISSN: 16616596     EISSN: 14220067     Source Type: Journal    
DOI: 10.3390/ijms151120072     Document Type: Editorial

References (25)

1. Chou, K.C. Prediction of protein cellular attributes using pseudo amino acid composition. Proteins: Struct. Funct. Genet. 2001, 43, 246-255.
2. Chou, K.C. Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes. Bioinformatics 2005, 21, 10-19.
3. Lin, S.X.; Lapointe, J. Theoretical and experimental biology in one-A symposium in honour of Professor Kuo-Chen Chou's 50th anniversary and Professor Richard Giegé's 40th anniversary of their scientific careers. J. Biomed. Sci. Eng. (JBiSE) 2013, 6, 435-442.
4. Du, P.; Gu, S.; Jiao, Y. PseAAC-general: Fast building various modes of general form of Chou's pseudo-amino acid composition for large-scale protein datasets. Int. J. Mol. Sci. 2014, 15, 3495-3506.
5. Zhang, J.; Zhao, X.; Sun, P.; Ma, Z. PSNO: Predicting cysteine S-nitrosylation sites by incorporating various sequence-derived features into the general form of Chou's PseAAC. Int. J. Mol. Sci. 2014, 15, 11204-11219.
6. Chen, W.; Lei, T.Y.; Jin, D.C.; Lin, H.; Chou, K.C. PseKNC: A flexible web-server for generating pseudo K-tuple nucleotide composition. Anal. Biochem. 2014, 456, 53-60.
7. Chen, W.; Zhang, X.; Brooker, J.; Lin, H.; Zhang, L.; Chou, K.C. PseKNC-General: A cross-platform package for generating various modes of pseudo nucleotide compositions. Bioinformatics 2014, doi:10.1093/bioinformatics/btu602.
8. Qiu, W.-R.; Xiao, X.; Chou, K.-C. iRSpot-TNCPseAAC: Identify recombination spots with trinucleotide composition and pseudo amino acid components. Int. J. Mol. Sci. 2014, 15, 1746-1766.
9. 2 from venom of Andaman Cobra sub-species Naja naja sagittifera at 2.0 Å resolution. Int. J. Mol. Sci. 2014, 15, 4221-4236.
10. Ghorab, M.M.; El-Gazzar, M.G.; Alsaid, M.S. Synthesis, characterization and anti-breast cancer activity of new 4-aminoantipyrine-based heterocycles. Int. J. Mol. Sci. 2014, 15, 7539-7553.
11. Xu, G.; Chen, Y.; Shen, K.; Wang, X.; Li, F.; He, Y. The discovery of potentially selective human neuronal nitric oxide synthase (nNOS) inhibitors: A combination of pharmacophore modelling, CoMFA, virtual screening and molecular docking studies. Int. J. Mol. Sci. 2014, 15, 8553-8569.
12. Liu, Z.; Fu, J.; Shan, L.; Sun, Q.; Zhang, W. Synthesis, preliminary bioevaluation and computational analysis of caffeic acid analogues. Int. J. Mol. Sci. 2014, 15, 8808-8820.
13. Barbuceanu, S.-F.; Ilies, D.C.; Saramet, G.; Uivarosi, V.; Draghici, C.; Radulescu, V. Synthesis and antioxidant activity evaluation of new compounds from hydrazinecarbothioamide and 1,2,4-triazole class containing diarylsulfone and 2,4-difluorophenyl moieties. Int. J. Mol. Sci. 2014, 15, 10908-10925.
14. Huang, Y.; Lu, Y.; Zhang, L.; Yan, J.; Jiang, J.; Jiang, H. Perineural dexmedetomidine attenuates inflammation in rat sciatic nerve via the NF-κB pathway. Int. J. Mol. Sci. 2014, 15, 4049-4059.
15. Oh, Y.-C.; Jeong; Y.H.; Cho, W.-K.; Gu, M.-J.; Ma, J.Y. Inhibitory effects of palmultang on inflammatory mediator production related to suppression of NF-κB and MAPK pathways and induction of HO-1 expression in macrophages. Int. J. Mol. Sci. 2014, 15, 8443-8457.
16. Ryu, S.; Song, P.I.; Seo, C.H.; Cheong, H.; Park, Y. Colonization and infection of the skin by S. aureus: Immune system evasion and the response to cationic antimicrobial peptides. Int. J. Mol. Sci. 2014, 15, 8753-8772.
17. Yin, X.; Zhang, J.; Li, X.; Liu, D.; Feng, C.; Liang, R.; Zhuang, K.; Cai, C.; Xue, X.; Jing, F.; et al. DADS suppresses human esophageal xenograft tumors through RAF/MEK/ERK and mitochondria-dependent pathways. Int. J. Mol. Sci. 2014, 15, 12422-12441.
18. Liu, Z.; Xi, R.; Zhang, Z.; Li, W.; Liu, Y.; Jin, F.; Wang, X. 4-Hydroxyphenylacetic acid attenuated inflammation and edema via suppressing HIF-1α in seawater aspiration-induced lung injury in rats. Int. J. Mol. Sci. 2014, 15, 12861-12884.
19. Ho, M.T.; Kang, H.S.; Huh, J.S.; Kim, Y.M.; Lim, Y.; Cho, M. Effects of the novel compound DK223 ([1E,2E-1,2-bis(6-methoxy-2H-chromen-3-yl)methylene]hydrazine) on migration and proliferation of human keratinocytes and primary dermal fibroblasts. Int. J. Mol. Sci. 2014, 15, 13091-13110.
20. Zhang, S.-W.; Hao, L.-Y.; Zhang, T.-H. Prediction of protein-protein interaction with pairwise kernel support vector machine. Int. J. Mol. Sci. 2014, 15, 3220-3233.
21. Fan, Y.-N.; Xiao, X.; Min, J.-L.; Chou, K.-C. iNR-Drug: Predicting the interaction of drugs with nuclear receptors in cellular networking. Int. J. Mol. Sci. 2014, 15, 4915-4937.
22. Zheng, S.; Chang, M.-L.; Zhou, J.; Fu, J.-W.; Zhang, Q.-W.; Li, S.-Y.; Qiao, W.; Liu, J.-M. Qualitative analysis of the helical electronic energy of inherently chiral calix[4]arenes: An approach to effectively assign their absolute configuration. Int. J. Mol. Sci. 2014, 15, 9844-9858.
23. Li, B.; Xiong, M.; Zhang, H.-Y. Elucidating polypharmacological mechanisms of polyphenols by gene module profile analysis. Int. J. Mol. Sci. 2014, 15, 11245-11254.
24. Chou, K.C. Some remarks on predicting multi-label attributes in molecular biosystems. Mol. Biosyst. 2013, 9, 1092-1100.
25. Durán, F.J.R.; Alonso, N.; Caamaño, O.; García-Mera, X.; Yañez, M.; Prado-Prado, F.J.; González-Díaz, H. Prediction of multi-target networks of neuroprotective compounds with entropy indices and synthesis, assay, and theoretical study of new asymmetric 1,2-rasagiline carbamates. Int. J. Mol. Sci. 2014, 15, 17035-17064.