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Volumn 40, Issue 7, 2014, Pages 3032-3039

Activation-induced cytidine deaminase regulates activity-dependent BDNF expression in post-mitotic cortical neurons

Author keywords

BDNF; AID; DNA methylation; Mice; Post mitotic cortical neurons

Indexed keywords

ACTIVATION INDUCED CYTIDINE DEAMINASE; BRAIN DERIVED NEUROTROPHIC FACTOR; CYCLIC AMP RESPONSIVE ELEMENT BINDING PROTEIN; MESSENGER RNA; AICDA (ACTIVATION-INDUCED CYTIDINE DEAMINASE); CYTIDINE DEAMINASE;

EID: 84908179005     PISSN: 0953816X     EISSN: 14609568     Source Type: Journal    
DOI: 10.1111/ejn.12678     Document Type: Article
Times cited : (13)

References (52)
  • 3
    • 77649104794 scopus 로고    scopus 로고
    • Reprogramming towards pluripotency requires AID-dependent DNA demethylation
    • Bhutani, N., Brady, J.J., Damian, M., Sacco, A., Corbel, S.Y. & Blau, H.M. (2010) Reprogramming towards pluripotency requires AID-dependent DNA demethylation. Nature, 463, 1042-1047.
    • (2010) Nature , vol.463 , pp. 1042-1047
    • Bhutani, N.1    Brady, J.J.2    Damian, M.3    Sacco, A.4    Corbel, S.Y.5    Blau, H.M.6
  • 4
    • 84861221693 scopus 로고    scopus 로고
    • Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution
    • Booth, M.J., Branco, M.R., Ficz, G., Oxley, D., Krueger, F., Reik, W. & Balasubramanian, S. (2012) Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Science, 336, 934-937.
    • (2012) Science , vol.336 , pp. 934-937
    • Booth, M.J.1    Branco, M.R.2    Ficz, G.3    Oxley, D.4    Krueger, F.5    Reik, W.6    Balasubramanian, S.7
  • 5
    • 34247224239 scopus 로고    scopus 로고
    • Histone modifications around individual BDNF gene promoters in prefrontal cortex are associated with extinction of conditioned fear
    • Bredy, T.W., Wu, H., Crego, C., Zellhoefer, J., Sun, Y.E. & Barad, M. (2007) Histone modifications around individual BDNF gene promoters in prefrontal cortex are associated with extinction of conditioned fear. Learn. Memory, 14, 268-276.
    • (2007) Learn. Memory , vol.14 , pp. 268-276
    • Bredy, T.W.1    Wu, H.2    Crego, C.3    Zellhoefer, J.4    Sun, Y.E.5    Barad, M.6
  • 7
    • 37349094048 scopus 로고    scopus 로고
    • BDNF mRNA splice variants display activity-dependent targeting to distinct hippocampal laminae
    • Chiaruttini, C., Sonego, M., Baj, G., Simonato, M. & Tongiorgi, E. (2008) BDNF mRNA splice variants display activity-dependent targeting to distinct hippocampal laminae. Mol. Cell. Neurosci., 37, 11-19.
    • (2008) Mol. Cell. Neurosci. , vol.37 , pp. 11-19
    • Chiaruttini, C.1    Sonego, M.2    Baj, G.3    Simonato, M.4    Tongiorgi, E.5
  • 12
    • 77950187447 scopus 로고    scopus 로고
    • Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons
    • Feng, J., Zhou, Y., Campbell, S.L., Le, T., Li, E., Sweatt, J.D., Silva, A.J. & Fan, G. (2010) Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons. Nat. Neurosci., 13, 423-430.
    • (2010) Nat. Neurosci. , vol.13 , pp. 423-430
    • Feng, J.1    Zhou, Y.2    Campbell, S.L.3    Le, T.4    Li, E.5    Sweatt, J.D.6    Silva, A.J.7    Fan, G.8
  • 13
    • 57649211993 scopus 로고    scopus 로고
    • Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection
    • Flavell, S.W., Kim, T.K., Gray, J.M., Harmin, D.A., Hemberg, M., Hong, E.J., Markenscoff-Papadimitriou, E., Bear, D.M. & Greenberg, M.E. (2008) Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection. Neuron, 60, 1022-1038.
    • (2008) Neuron , vol.60 , pp. 1022-1038
    • Flavell, S.W.1    Kim, T.K.2    Gray, J.M.3    Harmin, D.A.4    Hemberg, M.5    Hong, E.J.6    Markenscoff-Papadimitriou, E.7    Bear, D.M.8    Greenberg, M.E.9
  • 14
    • 84870152439 scopus 로고    scopus 로고
    • 5-methylcytosine DNA demethylation: more than losing a methyl group
    • Franchini, D.M., Schmitz, K.M. & Petersen-Maht, S.K. (2012) 5-methylcytosine DNA demethylation: more than losing a methyl group. Annu. Rev. Genet., 46, 419-441.
    • (2012) Annu. Rev. Genet. , vol.46 , pp. 419-441
    • Franchini, D.M.1    Schmitz, K.M.2    Petersen-Maht, S.K.3
  • 15
  • 17
    • 79955538247 scopus 로고    scopus 로고
    • Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain
    • Guo, J.U., Su, Y., Zhong, C., Ming, G.L. & Song, H. (2011) Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain. Cell, 145, 423-434.
    • (2011) Cell , vol.145 , pp. 423-434
    • Guo, J.U.1    Su, Y.2    Zhong, C.3    Ming, G.L.4    Song, H.5
  • 18
    • 0033533707 scopus 로고    scopus 로고
    • Is there an epigenetic component in long-term memory?
    • Holliday, R. (1999) Is there an epigenetic component in long-term memory? J. Theor. Biol., 200, 339-341.
    • (1999) J. Theor. Biol. , vol.200 , pp. 339-341
    • Holliday, R.1
  • 19
    • 77749277177 scopus 로고    scopus 로고
    • The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing
    • Huang, Y., Pastor, W.A., Shen, Y., Tahiliani, M., Liu, D.R. & Rao, A. (2010) The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing. PLoS One, 5, e8888.
    • (2010) PLoS One , vol.5 , pp. e8888
    • Huang, Y.1    Pastor, W.A.2    Shen, Y.3    Tahiliani, M.4    Liu, D.R.5    Rao, A.6
  • 21
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • Jones, P.A. & Baylin, S.B. (2007) The epigenomics of cancer. Cell, 128, 683-692.
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 25
    • 54849426071 scopus 로고    scopus 로고
    • Epigenetic regulation of BDNF gene transcription in the consolidation of fear memory
    • Lubin, F.D., Roth, T.L. & Sweatt, J.D. (2008) Epigenetic regulation of BDNF gene transcription in the consolidation of fear memory. J. Neurosci., 28, 10576-10586.
    • (2008) J. Neurosci. , vol.28 , pp. 10576-10586
    • Lubin, F.D.1    Roth, T.L.2    Sweatt, J.D.3
  • 26
    • 79958766042 scopus 로고    scopus 로고
    • Mechanisms of specificity in neuronal activity-regulated gene transcription
    • Lyons, M.R. & West, A.E. (2011) Mechanisms of specificity in neuronal activity-regulated gene transcription. Prog. Neurobiol., 94, 259-295.
    • (2011) Prog. Neurobiol. , vol.94 , pp. 259-295
    • Lyons, M.R.1    West, A.E.2
  • 27
    • 66849119061 scopus 로고    scopus 로고
    • DNA excision repair proteins and Gadd45 as molecular players for active DNA demethylation
    • Ma, D.K., Guo, J.U., Ming, G.L. & Song, H. (2009) DNA excision repair proteins and Gadd45 as molecular players for active DNA demethylation. Cell Cycle, 8, 1526-1531.
    • (2009) Cell Cycle , vol.8 , pp. 1526-1531
    • Ma, D.K.1    Guo, J.U.2    Ming, G.L.3    Song, H.4
  • 28
    • 0242300612 scopus 로고    scopus 로고
    • DNA methylation-related chromatin remodeling in activity-dependent BDNF gene regulation
    • Martinowich, K., Hattori, D., Wu, H., Fouse, S., He, F., Hu, Y., Fan, G. & Sun, Y.E. (2003) DNA methylation-related chromatin remodeling in activity-dependent BDNF gene regulation. Science, 302, 890-893.
    • (2003) Science , vol.302 , pp. 890-893
    • Martinowich, K.1    Hattori, D.2    Wu, H.3    Fouse, S.4    He, F.5    Hu, Y.6    Fan, G.7    Sun, Y.E.8
  • 29
    • 84875183056 scopus 로고    scopus 로고
    • Structure and function of long noncoding RNAs in epigenetic regulation
    • Mercer, T.R. & Mattick, J.S. (2013) Structure and function of long noncoding RNAs in epigenetic regulation. Nat. Struct. Mol. Biol., 20, 300-307.
    • (2013) Nat. Struct. Mol. Biol. , vol.20 , pp. 300-307
    • Mercer, T.R.1    Mattick, J.S.2
  • 31
    • 10644282845 scopus 로고    scopus 로고
    • Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming
    • Morgan, H.D., Dean, W., Coker, H.A., Reik, W. & Petersen-Maht, S.K. (2004) Activation-induced cytidine deaminase deaminates 5-methylcytosine in DNA and is expressed in pluripotent tissues: implications for epigenetic reprogramming. J. Biol. Chem., 279, 52353-52360.
    • (2004) J. Biol. Chem. , vol.279 , pp. 52353-52360
    • Morgan, H.D.1    Dean, W.2    Coker, H.A.3    Reik, W.4    Petersen-Maht, S.K.5
  • 32
    • 0034268780 scopus 로고    scopus 로고
    • Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
    • Muramatsu, M., Kinoshita, K., Fagarasan, S., Yamada, S., Shinkai, Y. & Honjo, T. (2000) Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme. Cell, 102, 553-563.
    • (2000) Cell , vol.102 , pp. 553-563
    • Muramatsu, M.1    Kinoshita, K.2    Fagarasan, S.3    Yamada, S.4    Shinkai, Y.5    Honjo, T.6
  • 34
    • 0037112088 scopus 로고    scopus 로고
    • Effect of the ubiquitous transcription factors, SP1 and MAZ, on NMDA receptor subunit type 1 (NR1) expression during neuronal differentiation
    • Okamoto, S., Sherman, K., Bai, G. & Lipton, S.A. (2002) Effect of the ubiquitous transcription factors, SP1 and MAZ, on NMDA receptor subunit type 1 (NR1) expression during neuronal differentiation. Brain Res. Mol. Brain Res., 107, 89-96.
    • (2002) Brain Res. Mol. Brain Res. , vol.107 , pp. 89-96
    • Okamoto, S.1    Sherman, K.2    Bai, G.3    Lipton, S.A.4
  • 35
    • 14644390283 scopus 로고    scopus 로고
    • Neuronal activity regulates the developmental expression and subcellular localization of cortical BDNF mRNA isoforms in vivo
    • Pattabiraman, P.P., Tropea, D., Chiaruttini, C., Tongiorgi, E., Cattaneo, A. & Domenici, L. (2005) Neuronal activity regulates the developmental expression and subcellular localization of cortical BDNF mRNA isoforms in vivo. Mol. Cell. Neurosci., 28, 556-570.
    • (2005) Mol. Cell. Neurosci. , vol.28 , pp. 556-570
    • Pattabiraman, P.P.1    Tropea, D.2    Chiaruttini, C.3    Tongiorgi, E.4    Cattaneo, A.5    Domenici, L.6
  • 36
    • 79952255488 scopus 로고    scopus 로고
    • Identification of cis-elements and transcription factors regulating neuronal activity-dependent transcription of human BDNF gene
    • Pruunsild, P., Sepp, M., Orav, E., Koppel, I. & Timmusk, T. (2011) Identification of cis-elements and transcription factors regulating neuronal activity-dependent transcription of human BDNF gene. J. Neurosci., 31, 3295-3308.
    • (2011) J. Neurosci. , vol.31 , pp. 3295-3308
    • Pruunsild, P.1    Sepp, M.2    Orav, E.3    Koppel, I.4    Timmusk, T.5
  • 37
    • 57649196594 scopus 로고    scopus 로고
    • DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45
    • Rai, K., Huggins, I.J., James, S.R., Karpf, A.R., Jones, D.A. & Cairns, B.R. (2008) DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45. Cell, 135, 1201-1212.
    • (2008) Cell , vol.135 , pp. 1201-1212
    • Rai, K.1    Huggins, I.J.2    James, S.R.3    Karpf, A.R.4    Jones, D.A.5    Cairns, B.R.6
  • 38
    • 34249279527 scopus 로고    scopus 로고
    • Stability and flexibility of epigenetic gene regulation in mammalian development
    • Reik, W. (2007) Stability and flexibility of epigenetic gene regulation in mammalian development. Nature, 447, 425-432.
    • (2007) Nature , vol.447 , pp. 425-432
    • Reik, W.1
  • 39
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn, J.L. & Chang, H.Y. (2012) Genome regulation by long noncoding RNAs. Annu. Rev. Biochem., 81, 145-166.
    • (2012) Annu. Rev. Biochem. , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 41
    • 0033862987 scopus 로고    scopus 로고
    • A CpG-rich RNA and an RNA helicase tightly associated with the DNA demethylation complex are present mainly in dividing chick embryo cells
    • Schwarz, S., Bourgeois, C., Soussaline, F., Homsy, C., Podesta, A. & Jost, J.P. (2000) A CpG-rich RNA and an RNA helicase tightly associated with the DNA demethylation complex are present mainly in dividing chick embryo cells. Eur. J. Cell Biol., 79, 488-494.
    • (2000) Eur. J. Cell Biol. , vol.79 , pp. 488-494
    • Schwarz, S.1    Bourgeois, C.2    Soussaline, F.3    Homsy, C.4    Podesta, A.5    Jost, J.P.6
  • 42
    • 0032055648 scopus 로고    scopus 로고
    • Identification of a signaling pathway involved in calcium regulation of BDNF expression
    • Shieh, P.B., Hu, S.C., Bobb, K., Timmusk, T. & Ghosh, A. (1998) Identification of a signaling pathway involved in calcium regulation of BDNF expression. Neuron, 20, 727-740.
    • (1998) Neuron , vol.20 , pp. 727-740
    • Shieh, P.B.1    Hu, S.C.2    Bobb, K.3    Timmusk, T.4    Ghosh, A.5
  • 43
    • 84875273571 scopus 로고    scopus 로고
    • Emerging role of non-coding RNA in neural plasticity, cognitive function, and neuropsychiatric disorders
    • Spadaro, P.A. & Bredy, T.W. (2012) Emerging role of non-coding RNA in neural plasticity, cognitive function, and neuropsychiatric disorders. Front. Genet., 3, 132.
    • (2012) Front. Genet. , vol.3 , pp. 132
    • Spadaro, P.A.1    Bredy, T.W.2
  • 44
    • 84870184296 scopus 로고    scopus 로고
    • Genetic deletion of Gadd45b, a regulator of active DNA demethylation, enhances long-term memory and synaptic plasticity
    • Sultan, F.A., Wang, J., Tront, J., Liebermann, D.A. & Sweatt, J.D. (2012) Genetic deletion of Gadd45b, a regulator of active DNA demethylation, enhances long-term memory and synaptic plasticity. J. Neurosci., 32, 17059-17066.
    • (2012) J. Neurosci. , vol.32 , pp. 17059-17066
    • Sultan, F.A.1    Wang, J.2    Tront, J.3    Liebermann, D.A.4    Sweatt, J.D.5
  • 45
    • 0037183985 scopus 로고    scopus 로고
    • Involvement of an upstream stimulatory factor as well as cAMP-responsive element-binding protein in the activation of brain-derived neurotrophic factor gene promoter I
    • Tabuchi, A., Sakaya, H., Kisukeda, T., Fushiki, H. & Tsuda, M. (2002) Involvement of an upstream stimulatory factor as well as cAMP-responsive element-binding protein in the activation of brain-derived neurotrophic factor gene promoter I. J. Biol. Chem., 277, 35920-35931.
    • (2002) J. Biol. Chem. , vol.277 , pp. 35920-35931
    • Tabuchi, A.1    Sakaya, H.2    Kisukeda, T.3    Fushiki, H.4    Tsuda, M.5
  • 47
    • 0037204070 scopus 로고    scopus 로고
    • A calcium-responsive transcription factor, CaRF, that regulates neuronal activity-dependent expression of BDNF
    • Tao, X., West, A.E., Chen, W.G., Corfas, G. & Greenberg, M.E. (2002) A calcium-responsive transcription factor, CaRF, that regulates neuronal activity-dependent expression of BDNF. Neuron, 33, 383-395.
    • (2002) Neuron , vol.33 , pp. 383-395
    • Tao, X.1    West, A.E.2    Chen, W.G.3    Corfas, G.4    Greenberg, M.E.5
  • 48
    • 0033534468 scopus 로고    scopus 로고
    • Brain-derived neurotrophic factor expression in vivo is under the control of neuron-restrictive silencer element
    • Timmusk, T., Palm, K., Lendahl, U. & Metsis, M. (1999) Brain-derived neurotrophic factor expression in vivo is under the control of neuron-restrictive silencer element. J. Biol. Chem., 274, 1078-1084.
    • (1999) J. Biol. Chem. , vol.274 , pp. 1078-1084
    • Timmusk, T.1    Palm, K.2    Lendahl, U.3    Metsis, M.4
  • 50
    • 66149149801 scopus 로고    scopus 로고
    • Reversing DNA methylation: new insights from neuronal activity-induced Gadd45b in adult neurogenesis
    • Wu, H. & Sun, Y.E. (2009) Reversing DNA methylation: new insights from neuronal activity-induced Gadd45b in adult neurogenesis. Sci. Signal., 2, pe17.
    • (2009) Sci. Signal. , vol.2 , pp. pe17
    • Wu, H.1    Sun, Y.E.2
  • 51
    • 83055173316 scopus 로고    scopus 로고
    • Regulation of brain-derived neurotrophic factor exon IV transcription though calcium responsive elements in cortical neurons
    • Zheng, F., Zhou, X., Luo, Y., Xiao, H., Wayman, G. & Wang, H. (2011) Regulation of brain-derived neurotrophic factor exon IV transcription though calcium responsive elements in cortical neurons. PLoS One, 6, e28441.
    • (2011) PLoS One , vol.6 , pp. e28441
    • Zheng, F.1    Zhou, X.2    Luo, Y.3    Xiao, H.4    Wayman, G.5    Wang, H.6
  • 52
    • 84874076991 scopus 로고    scopus 로고
    • Epigenetic regulation of memory formation and maintenance
    • Zovkic, I.B., Guzman-Karlsson, M.C. & Sweatt, J.D. (2013) Epigenetic regulation of memory formation and maintenance. Learn. Memory, 20, 61-74.
    • (2013) Learn. Memory , vol.20 , pp. 61-74
    • Zovkic, I.B.1    Guzman-Karlsson, M.C.2    Sweatt, J.D.3


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