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Volumn 9, Issue 10, 2014, Pages

Plasma metabolomics in human pulmonary tuberculosis disease: A pilot study

Author keywords

[No Author keywords available]

Indexed keywords

AGENTS AFFECTING LIPID METABOLISM; BIOLOGICAL MARKER; CHOLINE DERIVATIVE; CORD FACTOR; GLUTAMIC ACID; PHOSPHATIDYLINOSITOL; RESOLVIN D1; RESOLVIN D2; UNCLASSIFIED DRUG; TUBERCULOSTATIC AGENT;

EID: 84908048654     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0108854     Document Type: Article
Times cited : (126)

References (65)
  • 2
    • 84888645566 scopus 로고    scopus 로고
    • WHO's 2013 global report on tuberculosis: Successes, threats, and opportunities
    • Zumla A, George A, Sharma V, Herbert N, Baroness Masham of Ilton (2013) WHO's 2013 global report on tuberculosis: successes, threats, and opportunities. Lancet 382:1765-1767.
    • (2013) Lancet , vol.382 , pp. 1765-1767
    • Zumla, A.1    George, A.2    Sharma, V.3    Herbert, N.4    Baroness Masham of Ilton5
  • 6
    • 84864223921 scopus 로고    scopus 로고
    • Nutritional metabolomics: Progress in addressing complexity in diet and health
    • Jones DP, Park Y, Ziegler TR (2012) Nutritional metabolomics: progress in addressing complexity in diet and health. Annual Review of Nutrition 32:183-202.
    • (2012) Annual Review of Nutrition , vol.32 , pp. 183-202
    • Jones, D.P.1    Park, Y.2    Ziegler, T.R.3
  • 7
    • 84861175881 scopus 로고    scopus 로고
    • Highperformance metabolic profiling of plasma from seven mammalian species for simultaneous environmental chemical surveillance and bioeffect monitoring
    • Park YH, Lee K, Soltow QA, Strobel FH, Brigham KL, et al. (2012) Highperformance metabolic profiling of plasma from seven mammalian species for simultaneous environmental chemical surveillance and bioeffect monitoring. Toxicology 295:47-55.
    • (2012) Toxicology , vol.295 , pp. 47-55
    • Park, Y.H.1    Lee, K.2    Soltow, Q.A.3    Strobel, F.H.4    Brigham, K.L.5
  • 8
    • 84874614277 scopus 로고    scopus 로고
    • Hybrid feature detection and information accumulation using high-resolution LC-MS metabolomics data
    • Yu T, Park Y, Li S, Jones DP (2013) Hybrid feature detection and information accumulation using high-resolution LC-MS metabolomics data. Journal of Proteome Research 12:1419-1427.
    • (2013) Journal of Proteome Research , vol.12 , pp. 1419-1427
    • Yu, T.1    Park, Y.2    Li, S.3    Jones, D.P.4
  • 9
    • 84862651913 scopus 로고    scopus 로고
    • Host responses in malaria disease evaluated through nuclear magnetic resonance-based metabonomics
    • Sonawat HM, Sharma S (2012) Host responses in malaria disease evaluated through nuclear magnetic resonance-based metabonomics. Clinics in Laboratory Medicine 32:129-142.
    • (2012) Clinics in Laboratory Medicine , vol.32 , pp. 129-142
    • Sonawat, H.M.1    Sharma, S.2
  • 10
    • 84876060343 scopus 로고    scopus 로고
    • Global mass spectrometry based metabolomics profiling of erythrocytes infected with Plasmodium falciparum
    • Sana TR, Gordon DB, Fischer SM, Tichy SE, Kitagawa N, et al. (2013) Global mass spectrometry based metabolomics profiling of erythrocytes infected with Plasmodium falciparum. PLoS One 8:e60840.
    • (2013) PLoS One , vol.8 , pp. e60840
    • Sana, T.R.1    Gordon, D.B.2    Fischer, S.M.3    Tichy, S.E.4    Kitagawa, N.5
  • 11
    • 84873101916 scopus 로고    scopus 로고
    • Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections
    • Behrends V, Ryall B, Zlosnik JE, Speert DP, Bundy JG, et al. (2013) Metabolic adaptations of Pseudomonas aeruginosa during cystic fibrosis chronic lung infections. Environmental Microbiology 15:398-408.
    • (2013) Environmental Microbiology , vol.15 , pp. 398-408
    • Behrends, V.1    Ryall, B.2    Zlosnik, J.E.3    Speert, D.P.4    Bundy, J.G.5
  • 15
    • 27644588079 scopus 로고    scopus 로고
    • Potential drug targets in Mycobacterium tuberculosis through metabolic pathway analysis
    • Anishetty S, Pulimi M, Pennathur G (2005) Potential drug targets in Mycobacterium tuberculosis through metabolic pathway analysis. Computational Biology and Chemistry 29:368-378.
    • (2005) Computational Biology and Chemistry , vol.29 , pp. 368-378
    • Anishetty, S.1    Pulimi, M.2    Pennathur, G.3
  • 18
    • 84896932200 scopus 로고    scopus 로고
    • An altered M. Tuberculosis metabolome induced by katG mutations resulting in isoniazid-resistance
    • Loots DT (2014) An altered M. tuberculosis metabolome induced by katG mutations resulting in isoniazid-resistance. Antimicrobial Agents and Chemotherapy 58:2144-2149.
    • (2014) Antimicrobial Agents and Chemotherapy , vol.58 , pp. 2144-2149
    • Loots, D.T.1
  • 19
    • 79955801104 scopus 로고    scopus 로고
    • (1) H NMR-based metabolomic profiling in mice infected with Mycobacterium tuberculosis
    • Shin JH, Yang JY, Jeon BY, Yoon YJ, Cho SN, et al. (2011) (1) H NMR-based metabolomic profiling in mice infected with Mycobacterium tuberculosis. Journal of Proteome Research 10:2238-2247.
    • (2011) Journal of Proteome Research , vol.10 , pp. 2238-2247
    • Shin, J.H.1    Yang, J.Y.2    Jeon, B.Y.3    Yoon, Y.J.4    Cho, S.N.5
  • 20
    • 84867449305 scopus 로고    scopus 로고
    • Metabolomic signatures in guinea pigs infected with epidemic-associated W-Beijing strains of Mycobacterium tuberculosis
    • Somashekar BS, Amin AG, Tripathi P, MacKinnon N, Rithner CD, et al. (2012) Metabolomic signatures in guinea pigs infected with epidemic-associated W-Beijing strains of Mycobacterium tuberculosis. Journal of Proteome Research 11:4876-4884.
    • (2012) Journal of Proteome Research , vol.11 , pp. 4876-4884
    • Somashekar, B.S.1    Amin, A.G.2    Tripathi, P.3    MacKinnon, N.4    Rithner, C.D.5
  • 21
    • 84885206980 scopus 로고    scopus 로고
    • Application of 1H NMR spectroscopy-based metabolomics to sera of tuberculosis patients
    • Zhou A, Ni J, Xu Z, Wang Y, Lu S, et al. (2013) Application of 1H NMR spectroscopy-based metabolomics to sera of tuberculosis patients. Journal of Proteome Research 12:4642-4649.
    • (2013) Journal of Proteome Research , vol.12 , pp. 4642-4649
    • Zhou, A.1    Ni, J.2    Xu, Z.3    Wang, Y.4    Lu, S.5
  • 22
    • 84875806423 scopus 로고    scopus 로고
    • New sputum metabolite markers implicating adaptations of the host to Mycobacterium tuberculosis, and vice versa
    • du Preez I, Loots DT (2013) New sputum metabolite markers implicating adaptations of the host to Mycobacterium tuberculosis, and vice versa. Tuberculosis (Edinb) 93:330-337.
    • (2013) Tuberculosis (Edinb) , vol.93 , pp. 330-337
    • Du Preez, I.1    Loots, D.T.2
  • 23
    • 84877327664 scopus 로고    scopus 로고
    • Decreased serum 5-oxoproline in TB patients is associated with pathological damage of the lung
    • Che N, Cheng J, Li H, Zhang Z, Zhang X, et al. (2013) Decreased serum 5-oxoproline in TB patients is associated with pathological damage of the lung. Clinica Chimica Acta 423:5-9.
    • (2013) Clinica Chimica Acta , vol.423 , pp. 5-9
    • Che, N.1    Cheng, J.2    Li, H.3    Zhang, Z.4    Zhang, X.5
  • 24
    • 84864612118 scopus 로고    scopus 로고
    • Biomarkers of inflammation, immunosuppression and stress with active disease are revealed by metabolomic profiling of tuberculosis patients
    • Weiner J, Parida SK, Maertzdorf J, Black GF, Repsilber D, et al. (2012) Biomarkers of inflammation, immunosuppression and stress with active disease are revealed by metabolomic profiling of tuberculosis patients. PLoS One 7:e40221.
    • (2012) PLoS One , vol.7 , pp. e40221
    • Weiner, J.1    Parida, S.K.2    Maertzdorf, J.3    Black, G.F.4    Repsilber, D.5
  • 25
    • 84862793262 scopus 로고    scopus 로고
    • Effects of sunlight and diet on vitamin D status of pulmonary tuberculosis patients in Tbilisi, Georgia
    • Desai NS, Tukvadze N, Frediani JK, Kipiani M, Sanikidze E, et al. (2012) Effects of sunlight and diet on vitamin D status of pulmonary tuberculosis patients in Tbilisi, Georgia. Nutrition 28:362-366.
    • (2012) Nutrition , vol.28 , pp. 362-366
    • Desai, N.S.1    Tukvadze, N.2    Frediani, J.K.3    Kipiani, M.4    Sanikidze, E.5
  • 26
    • 84856778048 scopus 로고    scopus 로고
    • Use of a molecular diagnostic test in AFB smear positive tuberculosis suspects greatly reduces time to detection of multidrug resistant tuberculosis
    • Tukvadze N, Kempker RR, Kalandadze I, Kurbatova E, Leonard MK, et al. (2012) Use of a molecular diagnostic test in AFB smear positive tuberculosis suspects greatly reduces time to detection of multidrug resistant tuberculosis. PLoS One 7:e31563.
    • (2012) PLoS One , vol.7 , pp. e31563
    • Tukvadze, N.1    Kempker, R.R.2    Kalandadze, I.3    Kurbatova, E.4    Leonard, M.K.5
  • 28
    • 84887624892 scopus 로고    scopus 로고
    • A culture-specific nutrient intake assessment instrument in patients with pulmonary tuberculosis
    • Frediani JK, Tukvadze N, Sanikidze E, Kipiani M, Hebbar G, et al. (2013) A culture-specific nutrient intake assessment instrument in patients with pulmonary tuberculosis. Clinical Nutrition 32:1323-1028.
    • (2013) Clinical Nutrition , vol.32 , pp. 1323-1028
    • Frediani, J.K.1    Tukvadze, N.2    Sanikidze, E.3    Kipiani, M.4    Hebbar, G.5
  • 29
    • 84874349187 scopus 로고    scopus 로고
    • High-performance metabolic profiling with dual chromatography-Fouriertransform mass spectrometry (DC-FTMS) for study of the exposome
    • Soltow QA, Strobel FH, Mansfield KG, Wachtman L, Park Y, et al. (2013) High-performance metabolic profiling with dual chromatography-Fouriertransform mass spectrometry (DC-FTMS) for study of the exposome. Metabolomics 9:132-143.
    • (2013) Metabolomics , vol.9 , pp. 132-143
    • Soltow, Q.A.1    Strobel, F.H.2    Mansfield, K.G.3    Wachtman, L.4    Park, Y.5
  • 30
    • 77958042220 scopus 로고    scopus 로고
    • A practical approach to detect unique metabolic patterns for personalized medicine
    • Johnson JM, Yu T, Strobel FH, Jones DP (2010) A practical approach to detect unique metabolic patterns for personalized medicine. Analyst 135:2864-2870.
    • (2010) Analyst , vol.135 , pp. 2864-2870
    • Johnson, J.M.1    Yu, T.2    Strobel, F.H.3    Jones, D.P.4
  • 31
    • 84867753332 scopus 로고    scopus 로고
    • Specific lipid mediator signatures of human phagocytes: Microparticles stimulate macrophage efferocytosis and pro-resolving mediators
    • Dalli J, Serhan CN (2012) Specific lipid mediator signatures of human phagocytes: microparticles stimulate macrophage efferocytosis and pro-resolving mediators. Blood 120:e60-e72.
    • (2012) Blood , vol.120 , pp. e60-e72
    • Dalli, J.1    Serhan, C.N.2
  • 34
    • 84891863253 scopus 로고    scopus 로고
    • Resolvins, specialized pro-resolving lipid mediators, and their potential roles in metabolic disease
    • Spite M, Claria J, Serhan CN (2014) Resolvins, specialized pro-resolving lipid mediators, and their potential roles in metabolic disease. Cell Metabolism 19:21-36.
    • (2014) Cell Metabolism , vol.19 , pp. 21-36
    • Spite, M.1    Claria, J.2    Serhan, C.N.3
  • 35
    • 84901921079 scopus 로고    scopus 로고
    • Pro-resolving lipid mediators are leads for resolution physiology
    • Serhan CN (2014) Pro-resolving lipid mediators are leads for resolution physiology. Nature 510:92-101.
    • (2014) Nature , vol.510 , pp. 92-101
    • Serhan, C.N.1
  • 36
    • 84872187695 scopus 로고    scopus 로고
    • XMSanalyzer: Automated pipline for improved feature detection and downstream analyisis of large-scale, non-targeted metabolomics data
    • Uppal K, Soltow QA, Strobel FH, Pittard WS, Gernert KM, et al. (2013) xMSanalyzer: automated pipline for improved feature detection and downstream analyisis of large-scale, non-targeted metabolomics data. BMC Bioinformatics 14.
    • (2013) BMC Bioinformatics , pp. 14
    • Uppal, K.1    Soltow, Q.A.2    Strobel, F.H.3    Pittard, W.S.4    Gernert, K.M.5
  • 37
    • 33644872577 scopus 로고    scopus 로고
    • Limma: Linear models for microarray data
    • Gentleman VCR, Dudoit S, Irizarry R, Huber W, editors, New York
    • Smyth GK (2005) Limma: linear models for microarray data. In: Gentleman VCR, Dudoit S, Irizarry R, Huber W, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. New York. pp. 397-420.
    • (2005) Bioinformatics and Computational Biology Solutions Using R and Bioconductor , pp. 397-420
    • Smyth, G.K.1
  • 38
    • 0025066941 scopus 로고
    • More powerful procedures for multiple significance testing
    • Hochberg Y, Benjamini Y (1990) More powerful procedures for multiple significance testing. Statistics in Medicine 9:811-818.
    • (1990) Statistics in Medicine , vol.9 , pp. 811-818
    • Hochberg, Y.1    Benjamini, Y.2
  • 39
    • 74449085466 scopus 로고    scopus 로고
    • Massspectrometry-based metabolomics: Limitations and recommendations for future progress with particular focus on nutrition research
    • Scalbert A, Brennan L, Fiehn O, Hankemeier T, Kristal BS, et al. (2009) Massspectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research. Metabolomics 5:435-458.
    • (2009) Metabolomics , vol.5 , pp. 435-458
    • Scalbert, A.1    Brennan, L.2    Fiehn, O.3    Hankemeier, T.4    Kristal, B.S.5
  • 40
    • 84886066926 scopus 로고    scopus 로고
    • Serum metabolomics of slow vs. Rapid motor progression Parkinson's disease: A pilot study
    • Roede JR, Uppal K, Park Y, Lee K, Tran V, et al. (2013) Serum metabolomics of slow vs. rapid motor progression Parkinson's disease: a pilot study. PLoS One 8:377629.
    • (2013) PLoS One , vol.8 , pp. 377629
    • Roede, J.R.1    Uppal, K.2    Park, Y.3    Lee, K.4    Tran, V.5
  • 41
    • 84883153807 scopus 로고    scopus 로고
    • Metabolome-wide association study of neovascular age-related macular degeneration
    • Osborn MP, Park Y, Parks MB, Burgess LG, Uppal K, et al. (2013) Metabolome-wide association study of neovascular age-related macular degeneration. PLoS One 8:e72737.
    • (2013) PLoS One , vol.8 , pp. e72737
    • Osborn, M.P.1    Park, Y.2    Parks, M.B.3    Burgess, L.G.4    Uppal, K.5
  • 45
    • 84865588846 scopus 로고    scopus 로고
    • Accurate mass measurements and their appropriate use for reliable analyte identification
    • Godfrey AR, Brenton AG (2012) Accurate mass measurements and their appropriate use for reliable analyte identification. Analytical and Bioanalytical Chemistry 404:1159-1166.
    • (2012) Analytical and Bioanalytical Chemistry , vol.404 , pp. 1159-1166
    • Godfrey, A.R.1    Brenton, A.G.2
  • 46
    • 84894220883 scopus 로고    scopus 로고
    • Resolution of acute inflammation in the lung
    • Levy BD, Serhan CN (2014) Resolution of acute inflammation in the lung. Annual Review of Physiology 76:467-492.
    • (2014) Annual Review of Physiology , vol.76 , pp. 467-492
    • Levy, B.D.1    Serhan, C.N.2
  • 47
    • 33947682112 scopus 로고    scopus 로고
    • The cell-wall core of Mycobacterium tuberculosis in the context of drug discovery
    • Brennan PJ, Crick DC (2007) The cell-wall core of Mycobacterium tuberculosis in the context of drug discovery. Current Topics in Medicinal Chemistry 7:475-488.
    • (2007) Current Topics in Medicinal Chemistry , vol.7 , pp. 475-488
    • Brennan, P.J.1    Crick, D.C.2
  • 48
    • 84886267132 scopus 로고    scopus 로고
    • Eubacteria and archaea
    • Varki A, Cummings RD, Esko JD, Freeze HH, Stanley P, et al., editors, 2nd ed. New York: Cold Spring Harbor Laboratory Press
    • Esko JC, Doering TL, Raetz CRH (2009) Eubacteria and Archaea. In: Varki A, Cummings RD, Esko JD, Freeze HH, Stanley P, et al., editors. Essentials of Glycobiology. 2nd ed. New York: Cold Spring Harbor Laboratory Press.
    • (2009) Essentials of Glycobiology
    • Esko, J.C.1    Doering, T.L.2    Raetz, C.R.H.3
  • 49
    • 84870695041 scopus 로고    scopus 로고
    • Utilities for quantifying separation in PCA/PLS-DA scores plots
    • Worley B, Halouska S, Powers R (2013) Utilities for quantifying separation in PCA/PLS-DA scores plots. Analytical Biochemistry 433:102-104.
    • (2013) Analytical Biochemistry , vol.433 , pp. 102-104
    • Worley, B.1    Halouska, S.2    Powers, R.3
  • 52
    • 84885921456 scopus 로고    scopus 로고
    • Identification of mycobacteria based on spectroscopic analyses of mycolic acid profiles
    • Rivera-Betancourt OE, Karls R, Grosse-Siestrup B, Helms S, Quinn F, et al. (2013) Identification of mycobacteria based on spectroscopic analyses of mycolic acid profiles. Analyst 138:6774-6785.
    • (2013) Analyst , vol.138 , pp. 6774-6785
    • Rivera-Betancourt, O.E.1    Karls, R.2    Grosse-Siestrup, B.3    Helms, S.4    Quinn, F.5
  • 55
    • 0036129685 scopus 로고    scopus 로고
    • Molecular cloning and expression of a novel glycolipid sulfotransferase in Mycobacterium tuberculosis
    • Rivera-Marrero CA, Ritzenthaler JD, Newburn SA, Roman J, Cummings RD (2002) Molecular cloning and expression of a novel glycolipid sulfotransferase in Mycobacterium tuberculosis. Microbiology 148:783-792.
    • (2002) Microbiology , vol.148 , pp. 783-792
    • Rivera-Marrero, C.A.1    Ritzenthaler, J.D.2    Newburn, S.A.3    Roman, J.4    Cummings, R.D.5
  • 57
    • 0001062786 scopus 로고
    • Utilization of amino acids during growth of Mycobacterium tuberculosis in rotary cultures
    • Lyon RH, Hall WH, Costas-Martinez C (1970) Utilization of amino acids during growth of Mycobacterium tuberculosis in rotary cultures. Infection and Immunity 1:513-520.
    • (1970) Infection and Immunity , vol.1 , pp. 513-520
    • Lyon, R.H.1    Hall, W.H.2    Costas-Martinez, C.3
  • 58
    • 0016409339 scopus 로고
    • Structural study of the poly-l-Glutamic acid of the cell wall of Mycobacterium tuberculosis var hominis, strain Brevannes
    • Wietzerbin J, Lederer F, Petit JF (1975) Structural study of the poly-l-Glutamic acid of the cell wall of Mycobacterium tuberculosis var hominis, strain Brevannes. Biochemical and Biophysical Research Communications 62:246-252.
    • (1975) Biochemical and Biophysical Research Communications , vol.62 , pp. 246-252
    • Wietzerbin, J.1    Lederer, F.2    Petit, J.F.3
  • 60
    • 0037152160 scopus 로고    scopus 로고
    • Resolvins: A family of bioactive products of omega-3 fatty acid transformation circuits initiated by aspirin treatment that counter proinflammation signals
    • Serhan CN, Hong S, Gronert K, Colgan SP, Devchand PR, et al. (2002) Resolvins: a family of bioactive products of omega-3 fatty acid transformation circuits initiated by aspirin treatment that counter proinflammation signals. Journal of Experimental Medicine 196:1025-1037.
    • (2002) Journal of Experimental Medicine , vol.196 , pp. 1025-1037
    • Serhan, C.N.1    Hong, S.2    Gronert, K.3    Colgan, S.P.4    Devchand, P.R.5
  • 62
    • 70350678971 scopus 로고    scopus 로고
    • Resolvin D2 is a potent regulator of leukocytes and controls microbial sepsis
    • Spite M, Norling LV, Summers L, Yang R, Cooper D, et al. (2009) Resolvin D2 is a potent regulator of leukocytes and controls microbial sepsis. Nature 461:1287-1291.
    • (2009) Nature , vol.461 , pp. 1287-1291
    • Spite, M.1    Norling, L.V.2    Summers, L.3    Yang, R.4    Cooper, D.5
  • 63
    • 84856693171 scopus 로고    scopus 로고
    • Host genotype-specific therapies can optimize the inflammatory response to mycobacterial infections
    • Tobin DM, Roca FJ, Oh SF, McFarland R, Vickery TW, et al. (2012) Host genotype-specific therapies can optimize the inflammatory response to mycobacterial infections. Cell 148:434-446.
    • (2012) Cell , vol.148 , pp. 434-446
    • Tobin, D.M.1    Roca, F.J.2    Oh, S.F.3    McFarland, R.4    Vickery, T.W.5
  • 65
    • 84866978271 scopus 로고    scopus 로고
    • Resolvins D1, D2 and other mediators of self-limited resolution of inflammation in human blood following n-3 fatty acid supplementation
    • Mas E, Croft KD, Zahra P, Barden A, Mori TA (2012) Resolvins D1, D2 and other mediators of self-limited resolution of inflammation in human blood following n-3 fatty acid supplementation. Clinical Chemistry 58:1476-1484.
    • (2012) Clinical Chemistry , vol.58 , pp. 1476-1484
    • Mas, E.1    Croft, K.D.2    Zahra, P.3    Barden, A.4    Mori, T.A.5


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