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ChemPhysChem

Volumn 15, Issue 15, 2014, Pages 3246-3257

The Lineshape of the Electronic Spectrum of the Green Fluorescent Protein Chromophore, Part II: Solution Phase

(5) Avila Ferrer, Francisco J b,c Davari, Mehdi D d Morozov, Dmitry a Groenhof, Gerrit a Santoro, Fabrizio c

a UNIVERSITY OF JYVÄSKYLÄ (Finland)

b UNIVERSITY OF MÁLAGA (Spain)

c CNR (Italy)

d MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY (Germany)

Author keywords

green fluorescent protein; inhomogeneous broadening; solvent effects; solvent reorganization energy; vibronic spectra

Indexed keywords

BENZYL DERIVATIVE; GREEN FLUORESCENT PROTEIN; IMIDAZOLINE DERIVATIVE; P-HYDROXYBENZYLIDENEIMIDAZOLINONE; SOLUTION AND SOLUBILITY; SOLVENT;

CHEMISTRY; ELECTRON; HYDROGEN BOND; INFRARED SPECTROPHOTOMETRY; MOLECULAR DYNAMICS; QUANTUM THEORY; SOLUTION AND SOLUBILITY; TEMPERATURE; THERMODYNAMICS;

BENZYL COMPOUNDS; ELECTRONS; GREEN FLUORESCENT PROTEINS; HYDROGEN BONDING; IMIDAZOLINES; MOLECULAR DYNAMICS SIMULATION; QUANTUM THEORY; SOLUTIONS; SOLVENTS; SPECTROPHOTOMETRY, INFRARED; TEMPERATURE; THERMODYNAMICS;

EID: 84907985521 PISSN: 14394235 EISSN: 14397641 Source Type: Journal
DOI: 10.1002/cphc.201402485 Document Type: Article

Times cited : (35)

References (53)

1
- 0031663369
- R. Y. Tsien, Annu. Rev. Biochem. 1998, 67, 509.
- (1998) Annu. Rev. Biochem. , vol.67 , pp. 509
- Tsien, R.Y.¹

2
- 0036489443
- M. Zimmer, Chem. Rev. 2002, 102, 759.
- (2002) Chem. Rev. , vol.102 , pp. 759
- Zimmer, M.¹

3
- 29144447893
- M. Hofmann, C. Eggeling, S. Jakobs, S. W. Hell, Proc. Natl. Acad. Sci. USA 2005, 102, 17565.
- (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 17565
- Hofmann, M.¹ Eggeling, C.² Jakobs, S.³ Hell, S.W.⁴

4
- 33747179417
- E. Betzig, G. H. Patterson, R. Sougrat, O. W. Lindwasser, S. Olenych, J. S. Bonifacino, M. W. Davidson, J. Lippincott-Schwartz, H. F. Hess, Science 2006, 313, 1642.
- (2006) Science , vol.313 , pp. 1642
- Betzig, E.¹ Patterson, G.H.² Sougrat, R.³ Lindwasser, O.W.⁴ Olenych, S.⁵ Bonifacino, J.S.⁶ Davidson, M.W.⁷ Lippincott-Schwartz, J.⁸ Hess, H.F.⁹

5
- 33845360042
- S. T. Hess, T. P. K. Girirajan, M. D. Mason, Biophys. J. 2006, 91, 4258.
- (2006) Biophys. J. , vol.91 , pp. 4258
- Hess, S.T.¹ Girirajan, T.P.K.² Mason, M.D.³

6
- 34249945258
- S. W. Hell, Science 2007, 316, 1153.
- (2007) Science , vol.316 , pp. 1153
- Hell, S.W.¹

7
- 84908007767
- M. D. Davari, F. J. Avila Ferrer, D. Morozov, F. Santoro, G. Groenhof, ChemPhysChem 2014, 15, 3236.
- (2014) ChemPhysChem , vol.15 , pp. 3236
- Davari, M.D.¹ Avila Ferrer, F.J.² Morozov, D.³ Santoro, F.⁴ Groenhof, G.⁵

8
- 79951518650
- J. Conyard, M. Kondo, I. A. Heisler, G. Jones, A. Baldridge, L. M. Tolbert, K. M. Solntsev, S. R. Meech, J. Phys. Chem. B 2011, 115, 1571.
- (2011) J. Phys. Chem. B , vol.115 , pp. 1571
- Conyard, J.¹ Kondo, M.² Heisler, I.A.³ Jones, G.⁴ Baldridge, A.⁵ Tolbert, L.M.⁶ Solntsev, K.M.⁷ Meech, S.R.⁸

9
- 84866687363
- F. J. Avila Ferrer, F. Santoro, Phys. Chem. Chem. Phys. 2012, 14, 13549.
- (2012) Phys. Chem. Chem. Phys. , vol.14 , pp. 13549
- Avila Ferrer, F.J.¹ Santoro, F.²

10
- 84961980477
- J. Tomasi, B. Mennucci, R. Cammi, Chem. Rev. 2005, 105, 2999.
- (2005) Chem. Rev. , vol.105 , pp. 2999
- Tomasi, J.¹ Mennucci, B.² Cammi, R.³

11
- 3142771297
- T. Yanai, D. P. Tew, N. C. Handy, Chem. Phys. Lett. 2004, 393, 51.
- (2004) Chem. Phys. Lett. , vol.393 , pp. 51
- Yanai, T.¹ Tew, D.P.² Handy, N.C.³

12
- 84962468914
- R. Cammi, S. Corni, B. Mennucci, J. Tomasi, J. Chem. Phys. 2005, 122, 104513.
- (2005) J. Chem. Phys. , vol.122 , pp. 104513
- Cammi, R.¹ Corni, S.² Mennucci, B.³ Tomasi, J.⁴

13
- 33645506557
- S. Corni, R. Cammi, B. Mennucci, J. Tomasi, J. Chem. Phys. 2005, 123, 134512.
- (2005) J. Chem. Phys. , vol.123 , pp. 134512
- Corni, S.¹ Cammi, R.² Mennucci, B.³ Tomasi, J.⁴

14
- 84962463336
- M. Caricato, B. Mennucci, J. Tomasi, F. Ingrosso, R. Cammi, S. Corni, G. Scalmani, J. Chem. Phys. 2006, 124, 124520.
- (2006) J. Chem. Phys. , vol.124 , pp. 124520
- Caricato, M.¹ Mennucci, B.² Tomasi, J.³ Ingrosso, F.⁴ Cammi, R.⁵ Corni, S.⁶ Scalmani, G.⁷

15
- 0347170005
- W. J. Hehre, R. Ditchfield, J. A. Pople, J. Chem. Phys. 1972, 56, 2257.
- (1972) J. Chem. Phys. , vol.56 , pp. 2257
- Hehre, W.J.¹ Ditchfield, R.² Pople, J.A.³

16
- 33748545144
- P. C. Hariharan, J. A. Pople, Theor. Chim. Acc. 1973, 28, 213.
- (1973) Theor. Chim. Acc. , vol.28 , pp. 213
- Hariharan, P.C.¹ Pople, J.A.²

17
- 84957906916
- FCclasses, a Fortran 77 code: Available at, last accessed September 10
- F. Santoro, FCclasses, a Fortran 77 code: Available at http://www.pi.iccom.cnr.it/fcclasses, last accessed September 10, 2014.
- (2014)
- Santoro, F.¹

18
- 45449093077
- F. Santoro, A. Lami, R. Improta, J. Bloino, V. Barone, J. Chem. Phys. 2008, 128, 224311.
- (2008) J. Chem. Phys. , vol.128 , pp. 224311
- Santoro, F.¹ Lami, A.² Improta, R.³ Bloino, J.⁴ Barone, V.⁵

19
- 34248394318
- F. Santoro, A. Lami, R. Improta, V. Barone, J. Chem. Phys. 2007, 126, 184102.
- (2007) J. Chem. Phys. , vol.126 , pp. 184102
- Santoro, F.¹ Lami, A.² Improta, R.³ Barone, V.⁴

20
- 33847615576
- F. Santoro, R. Improta, A. Lami, J. Bloino, V. Barone, J. Chem. Phys. 2007, 126, 084509.
- (2007) J. Chem. Phys. , vol.126 , pp. 084509
- Santoro, F.¹ Improta, R.² Lami, A.³ Bloino, J.⁴ Barone, V.⁵

21
- 84957906917
- unpublished results.
- F. J. Avila Ferrer, J. Cerezo, F. Santoro, 2014, unpublished results.
- (2014)
- Avila Ferrer, F.J.¹ Cerezo, J.² Santoro, F.³

22
- 84957906918
- TDspectrum, a routine for TD calculations within FCclasses, visit.
- J. Cerezo, F. Santoro, TDspectrum, a routine for TD calculations within FCclasses, visit http://www.pi.iccom.cnr.it/fcclasses.
- Cerezo, J.¹ Santoro, F.²

23
- 6344265740
- R. Ianconescu, E. Pollak, J. Phys. Chem. A 2004, 108, 7778.
- (2004) J. Phys. Chem. A , vol.108 , pp. 7778
- Ianconescu, R.¹ Pollak, E.²

24
- 77953289989
- Q. Peng, Y. Niu, C. Deng, Z. Shuai, Chem. Phys. 2010, 370, 215.
- (2010) Chem. Phys. , vol.370 , pp. 215
- Peng, Q.¹ Niu, Y.² Deng, C.³ Shuai, Z.⁴

25
- 84868091758
- R. Borrelli, A. Capobianco, A. Peluso, J. Phys. Chem. A 2012, 116, 9934.
- (2012) J. Phys. Chem. A , vol.116 , pp. 9934
- Borrelli, R.¹ Capobianco, A.² Peluso, A.³

26
- 84867940337
- J. Huh, R. Berger, J. Phys. Conf. Ser. 2012, 380, 012019.
- (2012) J. Phys. Conf. Ser. , vol.380 , pp. 012019
- Huh, J.¹ Berger, R.²

27
- 84884184152
- A. Baiardi, J. Bloino, V. Barone, J. Chem. Theory Comput. 2013, 9, 4097.
- (2013) J. Chem. Theory Comput. , vol.9 , pp. 4097
- Baiardi, A.¹ Bloino, J.² Barone, V.³

28
- 36849135354
- M. Lax, J. Chem. Phys. 1952, 20, 1752.
- (1952) J. Chem. Phys. , vol.20 , pp. 1752
- Lax, M.¹

29
- 0035425883
- L. D. Schuler, X. Daura, W. F. van Gunsteren, J. Comput. Chem. 2001, 22, 1205.
- (2001) J. Comput. Chem. , vol.22 , pp. 1205
- Schuler, L.D.¹ Daura, X.² Van Gunsteren, W.F.³

30
- 0002775934
- in (Ed.: B. Pullman), Springer, Berlin, p.
- H. J. C. Berendsen, J. P. M. Postma, W. F. van Gunsteren, J. Hermans, in Intermolecular Forces (Ed.:, B. Pullman,), Springer, Berlin, 1981, p. 331.
- (1981) Intermolecular Forces , pp. 331
- Berendsen, H.J.C.¹ Postma, J.P.M.² Gunsteren, W.F.V.³ Hermans, J.⁴

31
- 33750587438
- H. J. C. Berendsen, J. P. M. Postma, W. F. van Gunsteren, A. R. H. J. DiNola, J. R. Haak, J. Chem. Phys. 1984, 81, 3684.
- (1984) J. Chem. Phys. , vol.81 , pp. 3684
- Berendsen, H.J.C.¹ Postma, J.P.M.² Van Gunsteren, W.F.³ DiNola, A.R.H.J.⁴ Haak, J.R.⁵

32
- 0000388705
- B. Hess, H. Bekker, H. J. C. Berendsen, J. G. E. M. Fraaije, J. Comput. Chem. 1997, 18, 1463.
- (1997) J. Comput. Chem. , vol.18 , pp. 1463
- Hess, B.¹ Bekker, H.² Berendsen, H.J.C.³ Fraaije, J.G.E.M.⁴

33
- 84986440341
- S. Miyamoto, P. A. Kollman, J. Comput. Chem. 1992, 13, 952.
- (1992) J. Comput. Chem. , vol.13 , pp. 952
- Miyamoto, S.¹ Kollman, P.A.²

34
- 0842341771
- M. J. S. Dewar, E. G. Zoebisch, E. F. Healy, J. J. P. Stewart, J. Am. Chem. Soc. 1985, 107, 3902.
- (1985) J. Am. Chem. Soc. , vol.107 , pp. 3902
- Dewar, M.J.S.¹ Zoebisch, E.G.² Healy, E.F.³ Stewart, J.J.P.⁴

35
- 0000138517
- P. N. Day, J. H. Jensen, M. S. Gordon, S. P. Webb, W. J. Stevens, M. Krauss, D. Garmer, H. Basch, D. Cohen, J. Chem. Phys. 1996, 105, 1968.
- (1996) J. Chem. Phys. , vol.105 , pp. 1968
- Day, P.N.¹ Jensen, J.H.² Gordon, M.S.³ Webb, S.P.⁴ Stevens, W.J.⁵ Krauss, M.⁶ Garmer, D.⁷ Basch, H.⁸ Cohen, D.⁹

36
- 79958812733
- A. A. Granovsky, J. Chem. Phys. 2011, 134, 214113.
- (2011) J. Chem. Phys. , vol.134 , pp. 214113
- Granovsky, A.A.¹

37
- 80053241980
- F. J. Avila Ferrer, R. Improta, F. Santoro, V. Barone, Phys. Chem. Chem. Phys. 2011, 13, 17007.
- (2011) Phys. Chem. Chem. Phys. , vol.13 , pp. 17007
- Avila Ferrer, F.J.¹ Improta, R.² Santoro, F.³ Barone, V.⁴

38
- 0001411860
- R. A. Marcus, J. Chem. Phys. 1963, 39, 460.
- (1963) J. Chem. Phys. , vol.39 , pp. 460
- Marcus, R.A.¹

39
- 0006468171
- R. A. Marcus, J. Chem. Phys. 1963, 38, 1335.
- (1963) J. Chem. Phys. , vol.38 , pp. 1335
- Marcus, R.A.¹

40
- 0000378873
- R. A. Marcus, J. Chem. Phys. 1963, 38, 1858.
- (1963) J. Chem. Phys. , vol.38 , pp. 1858
- Marcus, R.A.¹

41
- 33746868881
- R. Improta, V. Barone, G. Scalmani, M. J. Frisch, J. Chem. Phys. 2006, 125, 054103.
- (2006) J. Chem. Phys. , vol.125 , pp. 054103
- Improta, R.¹ Barone, V.² Scalmani, G.³ Frisch, M.J.⁴

42
- 34548058138
- R. Improta, G. Scalmani, M. J. Frisch, V. Barone, J. Chem. Phys. 2007, 127, 074504.
- (2007) J. Chem. Phys. , vol.127 , pp. 074504
- Improta, R.¹ Scalmani, G.² Frisch, M.J.³ Barone, V.⁴

44
- 84864487620
- A. A.Granovsky, Firefly version 8.0.1.
- Firefly Version 8.0.1.
- Granovsky, A.A.¹

45
- 46249092554
- B. Hess, C. Kutzner, D. Van Der Spoel, E. Lindahl, J. Chem. Theory Comput. 2008, 4, 435.
- (2008) J. Chem. Theory Comput. , vol.4 , pp. 435
- Hess, B.¹ Kutzner, C.² Van Der Spoel, D.³ Lindahl, E.⁴

46
- 1842502916
- G. Groenhof, M. Bouxin-Cademartory, B. Hess, S. P. De Visser, H. J. C. Berendsen, M. Olivucci, A. E. Mark, M. A. Robb, J. Am. Chem. Soc. 2004, 126, 4228.
- (2004) J. Am. Chem. Soc. , vol.126 , pp. 4228
- Groenhof, G.¹ Bouxin-Cademartory, M.² Hess, B.³ De Visser, S.P.⁴ Berendsen, H.J.C.⁵ Olivucci, M.⁶ Mark, A.E.⁷ Robb, M.A.⁸

47
- 15744371638
- P. Altoè, F. Bernardi, M. Garavelli, G. Orlandi, F. Negri, J. Am. Chem. Soc. 2005, 127, 3952.
- (2005) J. Am. Chem. Soc. , vol.127 , pp. 3952
- Altoè, P.¹ Bernardi, F.² Garavelli, M.³ Orlandi, G.⁴ Negri, F.⁵

48
- 33748779574
- J. Dong, K. M. Solntsev, L. M. Tolbert, J. Am. Chem. Soc. 2006, 128, 12038.
- (2006) J. Am. Chem. Soc. , vol.128 , pp. 12038
- Dong, J.¹ Solntsev, K.M.² Tolbert, L.M.³

49
- 84900540694
- S. Chibani, A. D. Laurent, A. Blondel, B. Mennucci, D. Jacquemin, J. Chem. Theory Comput. 2014, 10, 1848.
- (2014) J. Chem. Theory Comput. , vol.10 , pp. 1848
- Chibani, S.¹ Laurent, A.D.² Blondel, A.³ Mennucci, B.⁴ Jacquemin, D.⁵

50
- 84904537629
- D. Jacquemin, S. Chibani, B. Le Guennic, B. Mennucci, J. Phys. Chem. A 2014, 118, 5343.
- (2014) J. Phys. Chem. A , vol.118 , pp. 5343
- Jacquemin, D.¹ Chibani, S.² Le Guennic, B.³ Mennucci, B.⁴

51
- 32244434435
- S. S. Stavrov, K. M. Solntsev, L. M. Tolbert, D. Huppert, J. Am. Chem. Soc. 2006, 128, 1540.
- (2006) J. Am. Chem. Soc. , vol.128 , pp. 1540
- Stavrov, S.S.¹ Solntsev, K.M.² Tolbert, L.M.³ Huppert, D.⁴

52
- 5644244488
- A. Toniolo, S. Olsen, L. Manohar, T. J. Martinez, Faraday Discuss. 2004, 127, 149.
- (2004) Faraday Discuss. , vol.127 , pp. 149
- Toniolo, A.¹ Olsen, S.² Manohar, L.³ Martinez, T.J.⁴

53
- 84876697752
- C. R. S. Mooney, D. A. Horke, A. S. Chatterley, A. Simperler, H. H. Fielding, J. R. R. Verlet, Chem. Sci. 2013, 4, 921.
- (2013) Chem. Sci. , vol.4 , pp. 921
- Mooney, C.R.S.¹ Horke, D.A.² Chatterley, A.S.³ Simperler, A.⁴ Fielding, H.H.⁵ Verlet, J.R.R.⁶

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