메뉴 건너뛰기




Volumn 45, Issue 6, 2014, Pages 2250-2266

Microarray phosphatome profiling of breast cancer patients unveils a complex phosphatase regulatory role of the MAPK and PI3K pathways in estrogen receptor-negative breast cancers

Author keywords

Breast cancer; DUSP4; DUSP6; MAPK; Microarray; Phosphatase; Phosphatome; PI3K; Profiling

Indexed keywords

DUAL SPECIFICITY PHOSPHATASE; DUAL SPECIFICITY PHOSPHATASE 6; DUSP4 PROTEIN, HUMAN; DUSP6 PROTEIN, HUMAN; ESTROGEN RECEPTOR; MITOGEN ACTIVATED PROTEIN KINASE KINASE; MITOGEN ACTIVATED PROTEIN KINASE PHOSPHATASE; PHOSPHATIDYLINOSITOL 3 KINASE;

EID: 84907684933     PISSN: 10196439     EISSN: 17912423     Source Type: Journal    
DOI: 10.3892/ijo.2014.2648     Document Type: Article
Times cited : (14)

References (36)
  • 3
    • 2542637306 scopus 로고    scopus 로고
    • Mitogen-activated protein kinase phosphatase-1 is overexpressed in non-small cell lung cancer and is an independent predictor of outcome in patients
    • Vicent S, Garayoa M, Lopez-Picazo JM, et al: Mitogen-activated protein kinase phosphatase-1 is overexpressed in non-small cell lung cancer and is an independent predictor of outcome in patients. Clin Cancer Res 10:3639-3649, 2004.
    • (2004) Clin Cancer Res , vol.10 , pp. 3639-3649
    • Vicent, S.1    Garayoa, M.2    Lopez-Picazo, J.M.3
  • 4
    • 0037182759 scopus 로고    scopus 로고
    • CL100 expression is down-regulated in advanced epithelial ovarian cancer and its re-expression decreases its malignant potential
    • Manzano RG, Montuenga LM, Dayton M, et al: CL100 expression is down-regulated in advanced epithelial ovarian cancer and its re-expression decreases its malignant potential. Oncogene 21:4435-4447, 2002.
    • (2002) Oncogene , vol.21 , pp. 4435-4447
    • Manzano, R.G.1    Montuenga, L.M.2    Dayton, M.3
  • 5
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth GK and Speed T: Normalization of cDNA microarray data. Methods 31:265-273, 2003.
    • (2003) Methods , vol.31 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 6
    • 34250652449 scopus 로고    scopus 로고
    • Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series
    • Desmedt C, Piette F, Loi S, et al: Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series. Clin Cancer Res 13:3207-3214, 2007.
    • (2007) Clin Cancer Res , vol.13 , pp. 3207-3214
    • Desmedt, C.1    Piette, F.2    Loi, S.3
  • 7
    • 78650735473 scopus 로고    scopus 로고
    • The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
    • Shi L, Campbell G, Jones WD, et al: The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models. Nat Biotechnol 28:827-838, 2010.
    • (2010) Nat Biotechnol , vol.28 , pp. 827-838
    • Shi, L.1    Campbell, G.2    Jones, W.D.3
  • 8
    • 13844310310 scopus 로고    scopus 로고
    • Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer
    • Wang Y, Klijn JG, Zhang Y, et al: Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. Lancet 365:671-679, 2005.
    • (2005) Lancet , vol.365 , pp. 671-679
    • Wang, Y.1    Klijn, J.G.2    Zhang, Y.3
  • 9
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, V, He YD, Van't Veer LJ, et al: A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 347:1999-2009, 2002.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • Van De Vijver, M.J.V.1    He, Y.D.2    Van't Veer, L.J.3
  • 10
    • 77954347142 scopus 로고    scopus 로고
    • Discovering causal signaling pathways through gene-expression patterns
    • Parikh JR, Klinger B, Xia Y, Marto JA and Bluthgen N: Discovering causal signaling pathways through gene-expression patterns. Nucleic Acids Res 38: W109-W117, 2010.
    • (2010) Nucleic Acids Res , vol.38 , pp. W109-W117
    • Parikh, J.R.1    Klinger, B.2    Xia, Y.3    Marto, J.A.4    Bluthgen, N.5
  • 11
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
    • Subramanian A, Tamayo P, Mootha VK, et al: Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102:15545-15550, 2005.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 15545-15550
    • Subramanian, A.1    Tamayo, P.2    Mootha, V.K.3
  • 12
    • 19344375744 scopus 로고    scopus 로고
    • Semi-supervised methods to predict patient survival from gene expression data
    • Bair E and Tibshirani R: Semi-supervised methods to predict patient survival from gene expression data. PLoS Biol 2: E108, 2004.
    • (2004) PLoS Biol , vol.2 , pp. E108
    • Bair, E.1    Tibshirani, R.2
  • 13
    • 78149262301 scopus 로고    scopus 로고
    • GeneMANIA Cytoscape plugin: Fast gene function predictions on the desktop
    • Montojo J, Zuberi K, Rodriguez H, et al: GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop. Bioinformatics 26:2927-2928, 2010.
    • (2010) Bioinformatics , vol.26 , pp. 2927-2928
    • Montojo, J.1    Zuberi, K.2    Rodriguez, H.3
  • 14
    • 47549107689 scopus 로고    scopus 로고
    • GeneMANIA: A real-time multiple association network integration algorithm for predicting gene function
    • Mostafavi S, Ray D, Warde-Farley D, Grouios C and Morris Q: GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function. Genome Biol 9(Suppl 1):S4, 2008.
    • (2008) Genome Biol , vol.9 , pp. S4
    • Mostafavi, S.1    Ray, D.2    Warde-Farley, D.3    Grouios, C.4    Morris, Q.5
  • 15
    • 77954269901 scopus 로고    scopus 로고
    • The GeneMANIA prediction server: Biological network integration for gene prioritization and predicting gene function
    • Warde-Farley D, Donaldson SL, Comes O, et al: The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function. Nucleic Acids Res 38: W214-W220, 2010.
    • (2010) Nucleic Acids Res , vol.38 , pp. W214-W220
    • Warde-Farley, D.1    Donaldson, S.L.2    Comes, O.3
  • 16
    • 0034680102 scopus 로고    scopus 로고
    • Molecular portraits of human breast tumours
    • Perou CM, Sorlie T, Eisen MB, et al: Molecular portraits of human breast tumours. Nature 406:747-752, 2000.
    • (2000) Nature , vol.406 , pp. 747-752
    • Perou, C.M.1    Sorlie, T.2    Eisen, M.B.3
  • 17
    • 62449131093 scopus 로고    scopus 로고
    • Supervised risk predictor of breast cancer based on intrinsic subtypes
    • Parker JS, Mullins M, Cheang MC, et al: Supervised risk predictor of breast cancer based on intrinsic subtypes. J Clin Oncol 27:1160-1167, 2009.
    • (2009) J Clin Oncol , vol.27 , pp. 1160-1167
    • Parker, J.S.1    Mullins, M.2    Cheang, M.C.3
  • 18
    • 33646874546 scopus 로고    scopus 로고
    • The molecular portraits of breast tumors are conserved across microarray platforms
    • Hu Z, Fan C, Oh DS, et al: The molecular portraits of breast tumors are conserved across microarray platforms. BMC Genomics 7:96, 2006.
    • (2006) BMC Genomics , vol.7 , pp. 96
    • Hu, Z.1    Fan, C.2    Oh, D.S.3
  • 19
    • 67651148274 scopus 로고    scopus 로고
    • Evidence that inositol polyphosphate 4-phosphatase type II is a tumor suppressor that inhibits PI3K signaling
    • Gewinner C, Wang ZC, Richardson A, et al: Evidence that inositol polyphosphate 4-phosphatase type II is a tumor suppressor that inhibits PI3K signaling. Cancer Cell 16:115-125, 2009.
    • (2009) Cancer Cell , vol.16 , pp. 115-125
    • Gewinner, C.1    Wang, Z.C.2    Richardson, A.3
  • 20
    • 78650675585 scopus 로고    scopus 로고
    • Inositol polyphosphate 4-phosphatase II regulates PI3K/Akt signaling and is lost in human basal-like breast cancers
    • Fedele CG, Ooms LM, Ho M, et al: Inositol polyphosphate 4-phosphatase II regulates PI3K/Akt signaling and is lost in human basal-like breast cancers. Proc Natl Acad Sci USA 107:22231-22236, 2010.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 22231-22236
    • Fedele, C.G.1    Ooms, L.M.2    Ho, M.3
  • 21
    • 63849329936 scopus 로고    scopus 로고
    • Frequent PTEN genomic alterations and activated phosphatidylinositol 3-kinase pathway in basal-like breast cancer cells
    • Marty B, Maire V, Gravier E, et al: Frequent PTEN genomic alterations and activated phosphatidylinositol 3-kinase pathway in basal-like breast cancer cells. Breast Cancer Res 10: R101, 2008.
    • (2008) Breast Cancer Res , vol.10 , pp. R101
    • Marty, B.1    Maire, V.2    Gravier, E.3
  • 22
    • 65549165975 scopus 로고    scopus 로고
    • Genetic alterations and oncogenic pathways associated with breast cancer subtypes
    • Hu X, Stern HM, Ge L, et al: Genetic alterations and oncogenic pathways associated with breast cancer subtypes. Mol Cancer Res 7:511-522, 2009.
    • (2009) Mol Cancer Res , vol.7 , pp. 511-522
    • Hu, X.1    Stern, H.M.2    Ge, L.3
  • 23
    • 74049107249 scopus 로고    scopus 로고
    • PI3K pathway activation in breast cancer is associated with the basal-like phenotype and cancer-specific mortality
    • Lopez-Knowles E, O'Toole SA, McNeil CM, et al: PI3K pathway activation in breast cancer is associated with the basal-like phenotype and cancer-specific mortality. Int J Cancer 126:1121-1131, 2010.
    • (2010) Int J Cancer , vol.126 , pp. 1121-1131
    • Lopez-Knowles, E.1    O'Toole, S.A.2    McNeil, C.M.3
  • 24
    • 33745700217 scopus 로고    scopus 로고
    • Integrative genomics identifies distinct molecular classes of neuroblastoma and shows that multiple genes are targeted by regional alterations in DNA copy number
    • Wang Q, Diskin S, Rappaport E, et al: Integrative genomics identifies distinct molecular classes of neuroblastoma and shows that multiple genes are targeted by regional alterations in DNA copy number. Cancer Res 66:6050-6062, 2006.
    • (2006) Cancer Res , vol.66 , pp. 6050-6062
    • Wang, Q.1    Diskin, S.2    Rappaport, E.3
  • 25
    • 34250680520 scopus 로고    scopus 로고
    • Gene expression analysis of soft tissue sarcomas: Characterization and reclassification of malignant fibrous histiocytoma
    • Nakayama R, Nemoto T, Takahashi H, et al: Gene expression analysis of soft tissue sarcomas: characterization and reclassification of malignant fibrous histiocytoma. Mod Pathol 20:749-759, 2007.
    • (2007) Mod Pathol , vol.20 , pp. 749-759
    • Nakayama, R.1    Nemoto, T.2    Takahashi, H.3
  • 26
    • 84856252361 scopus 로고    scopus 로고
    • Epidermal growth factor receptor (EGFR)-mediated positive feedback of proteintyrosine phosphatase epsilon (PTPepsilon) on ERK1/2 and AKT protein pathways is required for survival of human breast cancer cells
    • Nunes-Xavier CE, Elson A and Pulido R: Epidermal growth factor receptor (EGFR)-mediated positive feedback of proteintyrosine phosphatase epsilon (PTPepsilon) on ERK1/2 and AKT protein pathways is required for survival of human breast cancer cells. J Biol Chem 287:3433-3444, 2012.
    • (2012) J Biol Chem , vol.287 , pp. 3433-3444
    • Nunes-Xavier, C.E.1    Elson, A.2    Pulido, R.3
  • 27
    • 77955907279 scopus 로고    scopus 로고
    • The dual-specificity MAP kinase phosphatases: Critical roles in development and cancer
    • Bermudez O, Pages G and Gimond C: The dual-specificity MAP kinase phosphatases: critical roles in development and cancer. Am J Physiol Cell Physiol 299: C189-C202, 2010.
    • (2010) Am J Physiol Cell Physiol , vol.299 , pp. C189-C202
    • Bermudez, O.1    Pages, G.2    Gimond, C.3
  • 28
    • 84884180105 scopus 로고    scopus 로고
    • SurvExpress: An online biomarker validation tool and database for cancer gene expression data using survival analysis
    • Aguirre-Gamboa R, Gomez-Rueda H, Martinez-Ledesma E, et al: SurvExpress: an online biomarker validation tool and database for cancer gene expression data using survival analysis. PLoS One 8: e74250, 2013.
    • (2013) PLoS One , vol.8 , pp. e74250
    • Aguirre-Gamboa, R.1    Gomez-Rueda, H.2    Martinez-Ledesma, E.3
  • 30
    • 58149279840 scopus 로고    scopus 로고
    • Expression of the putative tumor suppressor gene PTPN13/PTPL1 is an independent prognostic marker for overall survival in breast cancer
    • Revillion F, Puech C, Rabenoelina F, Chalbos D, Peyrat JP and Freiss G: Expression of the putative tumor suppressor gene PTPN13/PTPL1 is an independent prognostic marker for overall survival in breast cancer. Int J Cancer 124:638-643, 2009.
    • (2009) Int J Cancer , vol.124 , pp. 638-643
    • Revillion, F.1    Puech, C.2    Rabenoelina, F.3    Chalbos, D.4    Peyrat, J.P.5    Freiss, G.6
  • 31
    • 84859412054 scopus 로고    scopus 로고
    • Comprehensive predictive biomarker analysis for MEK inhibitor GSK1120212
    • Jing J, Greshock J, Holbrook JD, et al: Comprehensive predictive biomarker analysis for MEK inhibitor GSK1120212. Mol Cancer Ther 11:720-729, 2012.
    • (2012) Mol Cancer Ther , vol.11 , pp. 720-729
    • Jing, J.1    Greshock, J.2    Holbrook, J.D.3
  • 32
    • 33645730357 scopus 로고    scopus 로고
    • Activation of mitogen-activated protein kinase in estrogen receptor alpha-positive breast cancer cells in vitro induces an in vivo molecular phenotype of estrogen receptor alpha-negative human breast tumors
    • Creighton CJ, Hilger AM, Murthy S, Rae JM, Chinnaiyan AM and El-Ashry D: Activation of mitogen-activated protein kinase in estrogen receptor alpha-positive breast cancer cells in vitro induces an in vivo molecular phenotype of estrogen receptor alpha-negative human breast tumors. Cancer Res 66:3903-3911, 2006.
    • (2006) Cancer Res , vol.66 , pp. 3903-3911
    • Creighton, C.J.1    Hilger, A.M.2    Murthy, S.3    Rae, J.M.4    Chinnaiyan, A.M.5    El-Ashry, D.6
  • 33
    • 35148885729 scopus 로고    scopus 로고
    • A functional genetic approach identifies the PI3K pathway as a major determinant of trastuzumab resistance in breast cancer
    • Berns K, Horlings HM, Hennessy BT, et al: A functional genetic approach identifies the PI3K pathway as a major determinant of trastuzumab resistance in breast cancer. Cancer Cell 12:395-402, 2007.
    • (2007) Cancer Cell , vol.12 , pp. 395-402
    • Berns, K.1    Horlings, H.M.2    Hennessy, B.T.3
  • 34
    • 84894557306 scopus 로고    scopus 로고
    • Rapid induction of apoptosis by PI3K inhibitors is dependent upon their transient inhibition of RAS-ERK signaling
    • Will M, Qin AC, Toy W, et al: Rapid induction of apoptosis by PI3K inhibitors is dependent upon their transient inhibition of RAS-ERK signaling. Cancer Discov 4:334-347, 2014.
    • (2014) Cancer Discov , vol.4 , pp. 334-347
    • Will, M.1    Qin, A.C.2    Toy, W.3
  • 35
    • 0038244058 scopus 로고    scopus 로고
    • Gene expression predictors of breast cancer outcomes
    • Huang E, Cheng SH, Dressman H, et al: Gene expression predictors of breast cancer outcomes. Lancet 361:1590-1596, 2003.
    • (2003) Lancet , vol.361 , pp. 1590-1596
    • Huang, E.1    Cheng, S.H.2    Dressman, H.3
  • 36
    • 84863726932 scopus 로고    scopus 로고
    • Profiling of residual breast cancers after neoadjuvant chemotherapy identifies DUSP4 deficiency as a mechanism of drug resistance
    • Balko JM, Cook RS, Vaught DB, et al: Profiling of residual breast cancers after neoadjuvant chemotherapy identifies DUSP4 deficiency as a mechanism of drug resistance. Nat Med 18:1052-1059, 2012.
    • (2012) Nat Med , vol.18 , pp. 1052-1059
    • Balko, J.M.1    Cook, R.S.2    Vaught, D.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.