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Volumn 10, Issue 9, 2014, Pages

Local Effect of Enhancer of Zeste-Like Reveals Cooperation of Epigenetic and cis-Acting Determinants for Zygotic Genome Rearrangements

Author keywords

[No Author keywords available]

Indexed keywords

DCL5 PROTEIN; DNA; ENDONUCLEASE; EZL1 PROTEIN; HISTONE H3; HISTONE METHYLTRANSFERASE; MEMBRANE PROTEIN; RNA; UNCLASSIFIED DRUG; HISTONE; PROTOZOAL PROTEIN; TRANSPOSON;

EID: 84907584630     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1004665     Document Type: Article
Times cited : (58)

References (61)
  • 1
    • 80755187804 scopus 로고    scopus 로고
    • DNA elimination in ciliates: transposon domestication and genome surveillance
    • Chalker DL, Yao MC, (2011) DNA elimination in ciliates: transposon domestication and genome surveillance. Annu Rev Genet 45: 227–246.
    • (2011) Annu Rev Genet , vol.45 , pp. 227-246
    • Chalker, D.L.1    Yao, M.C.2
  • 2
    • 84868089881 scopus 로고    scopus 로고
    • The Paramecium germline genome provides a niche for intragenic parasitic DNA: evolutionary dynamics of internal eliminated sequences
    • Arnaiz O, Mathy N, Baudry C, Malinsky S, Aury J-M, et al. (2012) The Paramecium germline genome provides a niche for intragenic parasitic DNA: evolutionary dynamics of internal eliminated sequences. PLoS Genet 8: e1002984 doi:10.1371/journal.pgen.1002984
    • (2012) PLoS Genet , vol.8 , pp. e1002984
    • Arnaiz, O.1    Mathy, N.2    Baudry, C.3    Malinsky, S.4    Aury, J.-M.5
  • 3
    • 70350639013 scopus 로고    scopus 로고
    • PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements in the ciliate Paramecium tetraurelia
    • Baudry C, Malinsky S, Restituito M, Kapusta A, Rosa S, et al. (2009) PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements in the ciliate Paramecium tetraurelia. Genes Dev 23: 2478–2483.
    • (2009) Genes Dev , vol.23 , pp. 2478-2483
    • Baudry, C.1    Malinsky, S.2    Restituito, M.3    Kapusta, A.4    Rosa, S.5
  • 4
    • 0029045905 scopus 로고
    • Consensus inverted terminal repeat sequence of Paramecium IESs: resemblance to termini of Tc1-related and Euplotes Tec transposons
    • Klobutcher LA, Herrick G, (1995) Consensus inverted terminal repeat sequence of Paramecium IESs: resemblance to termini of Tc1-related and Euplotes Tec transposons. Nucleic Acids Res 23: 2006–2013.
    • (1995) Nucleic Acids Res , vol.23 , pp. 2006-2013
    • Klobutcher, L.A.1    Herrick, G.2
  • 5
    • 63349109487 scopus 로고    scopus 로고
    • Silencing-associated and meiosis-specific small RNA pathways in Paramecium tetraurelia
    • Lepere G, Nowacki M, Serrano V, Gout JF, Guglielmi G, et al. (2009) Silencing-associated and meiosis-specific small RNA pathways in Paramecium tetraurelia. Nucleic Acids Res 37: 903–915.
    • (2009) Nucleic Acids Res , vol.37 , pp. 903-915
    • Lepere, G.1    Nowacki, M.2    Serrano, V.3    Gout, J.F.4    Guglielmi, G.5
  • 6
    • 84893016282 scopus 로고    scopus 로고
    • Functional Diversification of Dicer-like Proteins and Small RNAs Required for Genome Sculpting
    • Sandoval PY, Swart EC, Arambasic M, Nowacki M, (2014) Functional Diversification of Dicer-like Proteins and Small RNAs Required for Genome Sculpting. Dev Cell 28: 174–188 doi:10.1016/j.devcel.2013.12.010
    • (2014) Dev Cell , vol.28 , pp. 174-188
    • Sandoval, P.Y.1    Swart, E.C.2    Arambasic, M.3    Nowacki, M.4
  • 7
    • 44849120634 scopus 로고    scopus 로고
    • Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia
    • Lepere G, Betermier M, Meyer E, Duharcourt S, (2008) Maternal noncoding transcripts antagonize the targeting of DNA elimination by scanRNAs in Paramecium tetraurelia. Genes Dev 22: 1501–1512.
    • (2008) Genes Dev , vol.22 , pp. 1501-1512
    • Lepere, G.1    Betermier, M.2    Meyer, E.3    Duharcourt, S.4
  • 8
    • 68349137541 scopus 로고    scopus 로고
    • Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts
    • Duharcourt S, Lepere G, Meyer E, (2009) Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts. Trends Genet 25: 344–350.
    • (2009) Trends Genet , vol.25 , pp. 344-350
    • Duharcourt, S.1    Lepere, G.2    Meyer, E.3
  • 9
    • 84861809174 scopus 로고    scopus 로고
    • RNA-guided DNA rearrangements in ciliates: Is the best genome defence a good offence?
    • Coyne RS, Lhuillier-Akakpo M, Duharcourt S, (2012) RNA-guided DNA rearrangements in ciliates: Is the best genome defence a good offence? Biol Cell 104: 1–17 doi:10.1111/boc.201100057
    • (2012) Biol Cell , vol.104 , pp. 1-17
    • Coyne, R.S.1    Lhuillier-Akakpo, M.2    Duharcourt, S.3
  • 10
    • 0029103019 scopus 로고
    • Epigenetic self-regulation of developmental excision of an internal eliminated sequence on Paramecium tetraurelia
    • Duharcourt S, Butler A, Meyer E, (1995) Epigenetic self-regulation of developmental excision of an internal eliminated sequence on Paramecium tetraurelia. Genes Dev 9: 2065–2077.
    • (1995) Genes Dev , vol.9 , pp. 2065-2077
    • Duharcourt, S.1    Butler, A.2    Meyer, E.3
  • 11
    • 0031754574 scopus 로고    scopus 로고
    • Homology-dependent maternal inhibition of developmental excision of internal eliminated sequences in Paramecium tetraurelia
    • Duharcourt S, Keller AM, Meyer E, (1998) Homology-dependent maternal inhibition of developmental excision of internal eliminated sequences in Paramecium tetraurelia. Mol Cell Biol 18: 7075–7085.
    • (1998) Mol Cell Biol , vol.18 , pp. 7075-7085
    • Duharcourt, S.1    Keller, A.M.2    Meyer, E.3
  • 12
    • 4344648254 scopus 로고    scopus 로고
    • RNA-mediated programming of developmental genome rearrangements in Paramecium tetraurelia
    • Garnier O, Serrano V, Duharcourt S, Meyer E, (2004) RNA-mediated programming of developmental genome rearrangements in Paramecium tetraurelia. Mol Cell Biol 24: 7370–7379.
    • (2004) Mol Cell Biol , vol.24 , pp. 7370-7379
    • Garnier, O.1    Serrano, V.2    Duharcourt, S.3    Meyer, E.4
  • 13
    • 84901250298 scopus 로고    scopus 로고
    • Genome-defence small RNAs exapted for epigenetic mating-type inheritance
    • Available
    • Singh DP, Saudemont B, Guglielmi G, Arnaiz O, Goût J-F, et al. (2014) Genome-defence small RNAs exapted for epigenetic mating-type inheritance. Nature In press. Available: http://dx.doi.org/10.1038/_nature13318.
    • (2014) Nature
    • Singh, D.P.1    Saudemont, B.2    Guglielmi, G.3    Arnaiz, O.4    Goût, J.-F.5
  • 14
    • 0037145016 scopus 로고    scopus 로고
    • Methylation of histone h3 at lysine 9 targets programmed DNA elimination in tetrahymena
    • Taverna SD, Coyne RS, Allis CD, (2002) Methylation of histone h3 at lysine 9 targets programmed DNA elimination in tetrahymena. Cell 110: 701–711.
    • (2002) Cell , vol.110 , pp. 701-711
    • Taverna, S.D.1    Coyne, R.S.2    Allis, C.D.3
  • 15
    • 1242319537 scopus 로고    scopus 로고
    • Histone H3 lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena
    • Liu Y, Mochizuki K, Gorovsky MA, (2004) Histone H3 lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena. Proc Natl Acad Sci U A 101: 1679–1684.
    • (2004) Proc Natl Acad Sci U A , vol.101 , pp. 1679-1684
    • Liu, Y.1    Mochizuki, K.2    Gorovsky, M.A.3
  • 16
    • 34250735582 scopus 로고    scopus 로고
    • RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena
    • Liu Y, Taverna SD, Muratore TL, Shabanowitz J, Hunt DF, et al. (2007) RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena. Genes Dev 21: 1530–1545.
    • (2007) Genes Dev , vol.21 , pp. 1530-1545
    • Liu, Y.1    Taverna, S.D.2    Muratore, T.L.3    Shabanowitz, J.4    Hunt, D.F.5
  • 17
    • 26444477370 scopus 로고    scopus 로고
    • Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila
    • Malone CD, Anderson AM, Motl JA, Rexer CH, Chalker DL, (2005) Germ line transcripts are processed by a Dicer-like protein that is essential for developmentally programmed genome rearrangements of Tetrahymena thermophila. Mol Cell Biol 25: 9151–9164.
    • (2005) Mol Cell Biol , vol.25 , pp. 9151-9164
    • Malone, C.D.1    Anderson, A.M.2    Motl, J.A.3    Rexer, C.H.4    Chalker, D.L.5
  • 18
    • 77952326283 scopus 로고    scopus 로고
    • A domesticated piggyBac transposase plays key roles in heterochromatin dynamics and DNA cleavage during programmed DNA deletion in Tetrahymena thermophila
    • Cheng CY, Vogt A, Mochizuki K, Yao MC, (2010) A domesticated piggyBac transposase plays key roles in heterochromatin dynamics and DNA cleavage during programmed DNA deletion in Tetrahymena thermophila. Mol Biol Cell 21: 1753–1762.
    • (2010) Mol Biol Cell , vol.21 , pp. 1753-1762
    • Cheng, C.Y.1    Vogt, A.2    Mochizuki, K.3    Yao, M.C.4
  • 19
    • 84892701098 scopus 로고    scopus 로고
    • A domesticated PiggyBac transposase interacts with heterochromatin and catalyzes reproducible DNA elimination in Tetrahymena
    • Vogt A, Mochizuki K, (2013) A domesticated PiggyBac transposase interacts with heterochromatin and catalyzes reproducible DNA elimination in Tetrahymena. PLoS Genet 9: e1004032 doi:10.1371/journal.pgen.1004032
    • (2013) PLoS Genet , vol.9 , pp. e1004032
    • Vogt, A.1    Mochizuki, K.2
  • 20
    • 84872533627 scopus 로고    scopus 로고
    • RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond
    • Castel SE, Martienssen RA, (2013) RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond. Nat Rev Genet 14: 100–112 doi:10.1038/nrg3355
    • (2013) Nat Rev Genet , vol.14 , pp. 100-112
    • Castel, S.E.1    Martienssen, R.A.2
  • 21
    • 84876750709 scopus 로고    scopus 로고
    • Small RNA-Directed Silencing: The Fly Finds Its Inner Fission Yeast?
    • Ge DT, Zamore PD, (2013) Small RNA-Directed Silencing: The Fly Finds Its Inner Fission Yeast? Curr Biol 23: R318–R320 doi:10.1016/j.cub.2013.03.033
    • (2013) Curr Biol , vol.23 , pp. R318-R320
    • Ge, D.T.1    Zamore, P.D.2
  • 22
    • 84858717695 scopus 로고    scopus 로고
    • Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila
    • Fass JN, Joshi NA, Couvillion MT, Bowen J, Gorovsky MA, et al. (2011) Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila. G3 Bethesda Md 1: 515–522 doi:10.1534/g3.111.000927
    • (2011) G3 Bethesda Md , vol.1 , pp. 515-522
    • Fass, J.N.1    Joshi, N.A.2    Couvillion, M.T.3    Bowen, J.4    Gorovsky, M.A.5
  • 23
    • 0030271907 scopus 로고    scopus 로고
    • Pdd1p, a novel chromodomain-containing protein, links heterochromatin assembly and DNA elimination in Tetrahymena
    • Madireddi MT, Coyne RS, Smothers JF, Mickey KM, Yao MC, et al. (1996) Pdd1p, a novel chromodomain-containing protein, links heterochromatin assembly and DNA elimination in Tetrahymena. Cell 87: 75–84.
    • (1996) Cell , vol.87 , pp. 75-84
    • Madireddi, M.T.1    Coyne, R.S.2    Smothers, J.F.3    Mickey, K.M.4    Yao, M.C.5
  • 24
    • 84859893371 scopus 로고    scopus 로고
    • Histone methylation: a dynamic mark in health, disease and inheritance
    • Greer EL, Shi Y, (2012) Histone methylation: a dynamic mark in health, disease and inheritance. Nat Rev Genet 13: 343–357 doi:10.1038/nrg3173
    • (2012) Nat Rev Genet , vol.13 , pp. 343-357
    • Greer, E.L.1    Shi, Y.2
  • 25
    • 33750858684 scopus 로고    scopus 로고
    • Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
    • Aury JM, Jaillon O, Duret L, Noel B, Jubin C, et al. (2006) Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature 444: 171–178.
    • (2006) Nature , vol.444 , pp. 171-178
    • Aury, J.M.1    Jaillon, O.2    Duret, L.3    Noel, B.4    Jubin, C.5
  • 26
    • 77957556792 scopus 로고    scopus 로고
    • Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia
    • Arnaiz O, Gout JF, Betermier M, Bouhouche K, Cohen J, et al. (2010) Gene expression in a paleopolyploid: a transcriptome resource for the ciliate Paramecium tetraurelia. BMC Genomics 11: 547.
    • (2010) BMC Genomics , vol.11 , pp. 547
    • Arnaiz, O.1    Gout, J.F.2    Betermier, M.3    Bouhouche, K.4    Cohen, J.5
  • 27
    • 79960056273 scopus 로고    scopus 로고
    • Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling
    • Bouhouche K, Gout JF, Kapusta A, Betermier M, Meyer E, (2011) Functional specialization of Piwi proteins in Paramecium tetraurelia from post-transcriptional gene silencing to genome remodelling. Nucleic Acids Res 39: 4249–4264.
    • (2011) Nucleic Acids Res , vol.39 , pp. 4249-4264
    • Bouhouche, K.1    Gout, J.F.2    Kapusta, A.3    Betermier, M.4    Meyer, E.5
  • 28
    • 24944572234 scopus 로고    scopus 로고
    • Nowa1p and Nowa2p: novel putative RNA binding proteins involved in trans-nuclear crosstalk in Paramecium tetraurelia
    • Nowacki M, Zagorski-Ostoja W, Meyer E, (2005) Nowa1p and Nowa2p: novel putative RNA binding proteins involved in trans-nuclear crosstalk in Paramecium tetraurelia. Curr Biol 15: 1616–1628.
    • (2005) Curr Biol , vol.15 , pp. 1616-1628
    • Nowacki, M.1    Zagorski-Ostoja, W.2    Meyer, E.3
  • 29
    • 79952307773 scopus 로고    scopus 로고
    • A functional study of genes essential for autogamy and nuclear reorganization in Paramecium
    • Nowak JK, Gromadka R, Juszczuk M, Jerka-Dziadosz M, Maliszewska K, et al. (2011) A functional study of genes essential for autogamy and nuclear reorganization in Paramecium. Eukaryot Cell 10: 363–72.
    • (2011) Eukaryot Cell , vol.10 , pp. 363-372
    • Nowak, J.K.1    Gromadka, R.2    Juszczuk, M.3    Jerka-Dziadosz, M.4    Maliszewska, K.5
  • 30
    • 0342470423 scopus 로고    scopus 로고
    • Timing of developmentally programmed excision and circularization of Paramecium internal eliminated sequences
    • Betermier M, Duharcourt S, Seitz H, Meyer E, (2000) Timing of developmentally programmed excision and circularization of Paramecium internal eliminated sequences. Mol Cell Biol 20: 1553–1561.
    • (2000) Mol Cell Biol , vol.20 , pp. 1553-1561
    • Betermier, M.1    Duharcourt, S.2    Seitz, H.3    Meyer, E.4
  • 33
    • 34748826166 scopus 로고    scopus 로고
    • A high-resolution atlas of nucleosome occupancy in yeast
    • Lee W, Tillo D, Bray N, Morse RH, Davis RW, et al. (2007) A high-resolution atlas of nucleosome occupancy in yeast. Nat Genet 39: 1235–1244.
    • (2007) Nat Genet , vol.39 , pp. 1235-1244
    • Lee, W.1    Tillo, D.2    Bray, N.3    Morse, R.H.4    Davis, R.W.5
  • 34
    • 79953089167 scopus 로고    scopus 로고
    • PIWI-interacting small RNAs: the vanguard of genome defence
    • Siomi MC, Sato K, Pezic D, Aravin AA, (2011) PIWI-interacting small RNAs: the vanguard of genome defence. Nat Rev Mol Cell Biol 12: 246–258.
    • (2011) Nat Rev Mol Cell Biol , vol.12 , pp. 246-258
    • Siomi, M.C.1    Sato, K.2    Pezic, D.3    Aravin, A.A.4
  • 35
    • 60149098474 scopus 로고    scopus 로고
    • Small RNAs as guardians of the genome
    • Malone CD, Hannon GJ, (2009) Small RNAs as guardians of the genome. Cell 136: 656–668.
    • (2009) Cell , vol.136 , pp. 656-668
    • Malone, C.D.1    Hannon, G.J.2
  • 36
    • 78751662908 scopus 로고    scopus 로고
    • The Polycomb complex PRC2 and its mark in life
    • Margueron R, Reinberg D, (2011) The Polycomb complex PRC2 and its mark in life. Nature 469: 343–349 doi:10.1038/nature09784
    • (2011) Nature , vol.469 , pp. 343-349
    • Margueron, R.1    Reinberg, D.2
  • 37
    • 79954992362 scopus 로고    scopus 로고
    • Nucleosome distribution and linker DNA: connecting nuclear function to dynamic chromatin structure
    • Szerlong HJ, Hansen JC, (2011) Nucleosome distribution and linker DNA: connecting nuclear function to dynamic chromatin structure. Biochem Cell Biol Biochim Biol Cell 89: 24–34 doi:10.1139/O10-139
    • (2011) Biochem Cell Biol Biochim Biol Cell , vol.89 , pp. 24-34
    • Szerlong, H.J.1    Hansen, J.C.2
  • 38
    • 84884214357 scopus 로고    scopus 로고
    • Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement
    • Ranjan A, Mizuguchi G, FitzGerald PC, Wei D, Wang F, et al. (2013) Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement. Cell 154: 1232–1245 doi:10.1016/j.cell.2013.08.005
    • (2013) Cell , vol.154 , pp. 1232-1245
    • Ranjan, A.1    Mizuguchi, G.2    Fitzgerald, P.C.3    Wei, D.4    Wang, F.5
  • 39
    • 74349083808 scopus 로고    scopus 로고
    • Maintaining clonal Paramecium tetraurelia cell lines of controlled age through daily reisolation
    • pdb prot5361
    • Beisson J, Betermier M, Bre MH, Cohen J, Duharcourt S, et al. (2010) Maintaining clonal Paramecium tetraurelia cell lines of controlled age through daily reisolation. Cold Spring Harb Protoc 2010: pdb prot5361.
    • (2010) Cold Spring Harb Protoc , vol.2010
    • Beisson, J.1    Betermier, M.2    Bre, M.H.3    Cohen, J.4    Duharcourt, S.5
  • 43
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792–1797 doi:10.1093/nar/gkh340
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 44
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S, Gascuel O, (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696–704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 45
    • 23144433822 scopus 로고    scopus 로고
    • PHYML Online—a web server for fast maximum likelihood-based phylogenetic inference
    • Guindon S, Lethiec F, Duroux P, Gascuel O, (2005) PHYML Online—a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 33: W557–559 doi:10.1093/nar/gki352
    • (2005) Nucleic Acids Res , vol.33 , pp. W557-559
    • Guindon, S.1    Lethiec, F.2    Duroux, P.3    Gascuel, O.4
  • 46
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • Le SQ, Gascuel O, (2008) An improved general amino acid replacement matrix. Mol Biol Evol 25: 1307–1320 doi:10.1093/molbev/msn067
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 47
    • 33745256005 scopus 로고    scopus 로고
    • Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
    • Anisimova M, Gascuel O, (2006) Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative. Syst Biol 55: 539–552 doi:10.1080/10635150600755453
    • (2006) Syst Biol , vol.55 , pp. 539-552
    • Anisimova, M.1    Gascuel, O.2
  • 48
    • 0036137143 scopus 로고    scopus 로고
    • RNA interference by feeding in Paramecium
    • Galvani A, Sperling L, (2002) RNA interference by feeding in Paramecium. Trends Genet 18: 11–12.
    • (2002) Trends Genet , vol.18 , pp. 11-12
    • Galvani, A.1    Sperling, L.2
  • 49
    • 78651325661 scopus 로고    scopus 로고
    • ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia
    • Arnaiz O, Sperling L, (2011) ParameciumDB in 2011: new tools and new data for functional and comparative genomics of the model ciliate Paramecium tetraurelia. Nucleic Acids Res 39: D632–636 doi:10.1093/nar/gkq918
    • (2011) Nucleic Acids Res , vol.39 , pp. D632-636
    • Arnaiz, O.1    Sperling, L.2
  • 50
  • 51
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R, (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinforma Oxf Engl 25: 1754–1760 doi:10.1093/bioinformatics/btp324
    • (2009) Bioinforma Oxf Engl , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 52
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinforma Oxf Engl 25: 2078–2079 doi:10.1093/bioinformatics/btp352
    • (2009) Bioinforma Oxf Engl , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5
  • 54
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing;
    • Benjamini Y, Hochberg Y, (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing;. J R Stat Soc Ser B 57: 289–300.
    • (1995) J R Stat Soc Ser B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 55
    • 0029019520 scopus 로고
    • A large multigene family codes for the polypeptides of the crystalline trichocyst matrix in Paramecium
    • Madeddu L, Gautier MC, Vayssie L, Houari A, Sperling L, (1995) A large multigene family codes for the polypeptides of the crystalline trichocyst matrix in Paramecium. Mol Biol Cell 6: 649–659.
    • (1995) Mol Biol Cell , vol.6 , pp. 649-659
    • Madeddu, L.1    Gautier, M.C.2    Vayssie, L.3    Houari, A.4    Sperling, L.5
  • 56
    • 38349161170 scopus 로고    scopus 로고
    • Functional diversification of centrins and cell morphological complexity
    • Gogendeau D, Klotz C, Arnaiz O, Malinowska A, Dadlez M, et al. (2008) Functional diversification of centrins and cell morphological complexity. J Cell Sci 121: 65–74 doi:10.1242/jcs.019414
    • (2008) J Cell Sci , vol.121 , pp. 65-74
    • Gogendeau, D.1    Klotz, C.2    Arnaiz, O.3    Malinowska, A.4    Dadlez, M.5
  • 57
    • 0022517360 scopus 로고
    • Autogamy in Paramecium. Cell cycle stage-specific commitment to meiosis
    • Berger JD, (1986) Autogamy in Paramecium. Cell cycle stage-specific commitment to meiosis. Exp Cell Res 166: 475–485.
    • (1986) Exp Cell Res , vol.166 , pp. 475-485
    • Berger, J.D.1
  • 58
    • 45149134029 scopus 로고    scopus 로고
    • Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes
    • Sun X-J, Xu P-F, Zhou T, Hu M, Fu C-T, et al. (2008) Genome-wide survey and developmental expression mapping of zebrafish SET domain-containing genes. PloS One 3: e1499 doi:10.1371/journal.pone.0001499
    • (2008) PloS One , vol.3 , pp. e1499
    • Sun, X.-J.1    Xu, P.-F.2    Zhou, T.3    Hu, M.4    Fu, C.-T.5
  • 59
    • 84861482924 scopus 로고    scopus 로고
    • Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions
    • Zhang L, Ma H, (2012) Complex evolutionary history and diverse domain organization of SET proteins suggest divergent regulatory interactions. New Phytol 195: 248–263 doi:10.1111/j.1469-8137.2012.04143.x
    • (2012) New Phytol , vol.195 , pp. 248-263
    • Zhang, L.1    Ma, H.2
  • 60
    • 23944509075 scopus 로고    scopus 로고
    • The SET-domain protein superfamily: protein lysine methyltransferases
    • Dillon SC, Zhang X, Trievel RC, Cheng X, (2005) The SET-domain protein superfamily: protein lysine methyltransferases. Genome Biol 6: 227 doi:10.1186/gb-2005-6-8-227
    • (2005) Genome Biol , vol.6 , pp. 227
    • Dillon, S.C.1    Zhang, X.2    Trievel, R.C.3    Cheng, X.4
  • 61
    • 55549090726 scopus 로고    scopus 로고
    • Dominant alleles identify SET domain residues required for histone methyltransferase of Polycomb repressive complex 2
    • Joshi P, Carrington EA, Wang L, Ketel CS, Miller EL, et al. (2008) Dominant alleles identify SET domain residues required for histone methyltransferase of Polycomb repressive complex 2. J Biol Chem 283: 27757–27766 doi:10.1074/jbc.M804442200
    • (2008) J Biol Chem , vol.283 , pp. 27757-27766
    • Joshi, P.1    Carrington, E.A.2    Wang, L.3    Ketel, C.S.4    Miller, E.L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.