-
2
-
-
4243155782
-
NMR Characterization of the Dynamics of Biomacromolecules
-
Palmer, A. G. NMR Characterization of the Dynamics of Biomacromolecules Chem. Rev. 2004, 104, 3623-3640
-
(2004)
Chem. Rev.
, vol.104
, pp. 3623-3640
-
-
Palmer, A.G.1
-
4
-
-
33646911358
-
Fast Time Scale Dynamics of Protein Backbones: NMR Relaxation Methods, Applications, and Functional Consequences
-
Jarymowycz, V. A.; Stone, M. J. Fast Time Scale Dynamics of Protein Backbones: NMR Relaxation Methods, Applications, and Functional Consequences Chem. Rev. 2006, 106, 1624-1671
-
(2006)
Chem. Rev.
, vol.106
, pp. 1624-1671
-
-
Jarymowycz, V.A.1
Stone, M.J.2
-
5
-
-
33646719091
-
Model-Free Approach to the Interpretation of Nuclear Magnetic Resonance Relaxation in Macromolecules. 1. Theory and Range of Validity
-
Lipari, G.; Szabo, A. Model-Free Approach to the Interpretation of Nuclear Magnetic Resonance Relaxation in Macromolecules. 1. Theory and Range of Validity J. Am. Chem. Soc. 1982, 104, 4546-4559
-
(1982)
J. Am. Chem. Soc.
, vol.104
, pp. 4546-4559
-
-
Lipari, G.1
Szabo, A.2
-
6
-
-
33845553743
-
Model-Free Approach to the Interpretation of Nuclear Magnetic Resonance Relaxation in Macromolecules. 2. Analysis of Experimental Results
-
Lipari, G.; Szabo, A. Model-Free Approach to the Interpretation of Nuclear Magnetic Resonance Relaxation in Macromolecules. 2. Analysis of Experimental Results J. Am. Chem. Soc. 1982, 104, 4559-4570
-
(1982)
J. Am. Chem. Soc.
, vol.104
, pp. 4559-4570
-
-
Lipari, G.1
Szabo, A.2
-
7
-
-
2942697858
-
Interpretation of Magnetic Resonance Data from Water Nuclei in Heterogeneous Systems
-
Halle, B.; Wennerström, H. Interpretation of Magnetic Resonance Data from Water Nuclei in Heterogeneous Systems J. Chem. Phys. 1981, 75, 1928-1943
-
(1981)
J. Chem. Phys.
, vol.75
, pp. 1928-1943
-
-
Halle, B.1
Wennerström, H.2
-
8
-
-
0028541223
-
A Test of the Model-Free Formulas. Effects of Anisotropic Rotational Diffusion and Dimerization
-
Schurr, J. M.; Babcock, H. P.; Fujimoto, B. S. A Test of the Model-Free Formulas. Effects of Anisotropic Rotational Diffusion and Dimerization J. Magn. Reson., Ser. B 1994, 105, 211-224
-
(1994)
J. Magn. Reson., Ser. B
, vol.105
, pp. 211-224
-
-
Schurr, J.M.1
Babcock, H.P.2
Fujimoto, B.S.3
-
9
-
-
0025046144
-
Deviations from the Simple Two-Parameter Model-Free Approach to the Interpretation of Nitrogen-15 Nuclear Magnetic Relaxation of Proteins
-
Clore, G. M.; Szabo, A.; Bax, A.; Kay, L. E.; Driscoll, P. C.; Gronenborn, A. M. Deviations from the Simple Two-Parameter Model-Free Approach to the Interpretation of Nitrogen-15 Nuclear Magnetic Relaxation of Proteins J. Am. Chem. Soc. 1990, 112, 4989-4991
-
(1990)
J. Am. Chem. Soc.
, vol.112
, pp. 4989-4991
-
-
Clore, G.M.1
Szabo, A.2
Bax, A.3
Kay, L.E.4
Driscoll, P.C.5
Gronenborn, A.M.6
-
10
-
-
84883251683
-
NMR Spectroscopy on Domain Dynamics in Biomacromolecules
-
Shapiro, Y. E. NMR Spectroscopy on Domain Dynamics in Biomacromolecules Prog. Biophys. Mol. Biol. 2013, 112, 58-117
-
(2013)
Prog. Biophys. Mol. Biol.
, vol.112
, pp. 58-117
-
-
Shapiro, Y.E.1
-
11
-
-
84861686134
-
15N Relaxation from Bacteriophage T4 Lysozyme: A Tensorial Perspective That Features Domain Motion
-
15N Relaxation from Bacteriophage T4 Lysozyme: A Tensorial Perspective That Features Domain Motion J. Phys. Chem. B 2012, 116, 6118-6127
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 6118-6127
-
-
Meirovitch, E.1
-
12
-
-
77953065253
-
Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach
-
Meirovitch, E.; Shapiro, Y. E.; Polimeno, A.; Freed, J. H. Structural Dynamics of Bio-Macromolecules by NMR: The Slowly Relaxing Local Structure Approach Prog. Nucl. Magn. Reson. Spectrosc. 2010, 56, 360-405
-
(2010)
Prog. Nucl. Magn. Reson. Spectrosc.
, vol.56
, pp. 360-405
-
-
Meirovitch, E.1
Shapiro, Y.E.2
Polimeno, A.3
Freed, J.H.4
-
13
-
-
80455127406
-
Theory of Nonrigid Rotational Motion Applied to NMR Relaxation in Rna
-
Emani, P. S.; Olsen, G. L.; Varani, G.; Drobny, G. P. Theory of Nonrigid Rotational Motion Applied to NMR Relaxation in Rna J. Phys. Chem. A 2011, 115, 12055-12069
-
(2011)
J. Phys. Chem. A
, vol.115
, pp. 12055-12069
-
-
Emani, P.S.1
Olsen, G.L.2
Varani, G.3
Drobny, G.P.4
-
14
-
-
84871554581
-
Stochastic Modeling of Flexible Biomolecules Applied to NMR Relaxation. 2. Interpretation of Complex Dynamics in Linear Oligosaccharides
-
Kotsyubynskyy, D.; Zerbetto, M.; Soltesova, M.; Engstrom, O.; Pendrill, R.; Kowalewski, J.; Widmalm, G.; Polimeno, A. Stochastic Modeling of Flexible Biomolecules Applied to NMR Relaxation. 2. Interpretation of Complex Dynamics in Linear Oligosaccharides J. Phys. Chem. B 2012, 116, 14541-14555
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 14541-14555
-
-
Kotsyubynskyy, D.1
Zerbetto, M.2
Soltesova, M.3
Engstrom, O.4
Pendrill, R.5
Kowalewski, J.6
Widmalm, G.7
Polimeno, A.8
-
15
-
-
0034789588
-
Analysis of Slow Interdomain Motion of Macromolecules Using NMR Relaxation Data
-
Baber, J. L.; Szabo, A.; Tjandra, N. Analysis of Slow Interdomain Motion of Macromolecules Using NMR Relaxation Data J. Am. Chem. Soc. 2001, 123, 3953-3959
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 3953-3959
-
-
Baber, J.L.1
Szabo, A.2
Tjandra, N.3
-
16
-
-
0035930040
-
Analysis of NMR Relaxation Data of Biomolecules with Slow Domain Motions Using Wobble-In-A-Cone Approximation
-
Chang, S.-L.; Tjandra, N. Analysis of NMR Relaxation Data of Biomolecules with Slow Domain Motions Using Wobble-in-a-Cone Approximation J. Am. Chem. Soc. 2001, 123, 11484-11485
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 11484-11485
-
-
Chang, S.-L.1
Tjandra, N.2
-
17
-
-
0043194166
-
Temperature Dependence of Domain Motions of Calmodulin Probed by NMR Relaxation at Multiple Fields
-
Chang, S.-L.; Szabo, A.; Tjandra, N. Temperature Dependence of Domain Motions of Calmodulin Probed by NMR Relaxation at Multiple Fields J. Am. Chem. Soc. 2003, 125, 11379-11384
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 11379-11384
-
-
Chang, S.-L.1
Szabo, A.2
Tjandra, N.3
-
18
-
-
67650482706
-
Influence of the Coupling of Interdomain and Overall Motions on NMR Relaxation
-
Wong, V.; Case, D. A.; Szabo, A. Influence of the Coupling of Interdomain and Overall Motions on NMR Relaxation Proc. Natl. Acad. Sci. U. S. A. 2009, 106, 11016-11021
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 11016-11021
-
-
Wong, V.1
Case, D.A.2
Szabo, A.3
-
19
-
-
84856477155
-
Coupling between Internal Dynamics and Rotational Diffusion in the Presence of Exchange between Discrete Molecular Conformations
-
034108
-
Ryabov, Y.; Clore, G. M.; Schwieters, C. D. Coupling between Internal Dynamics and Rotational Diffusion in the Presence of Exchange between Discrete Molecular Conformations J. Chem. Phys. 2012, 136 034108
-
(2012)
J. Chem. Phys.
, vol.136
-
-
Ryabov, Y.1
Clore, G.M.2
Schwieters, C.D.3
-
20
-
-
0029029566
-
Long-Range Motional Restrictions in a Multidomain Zinc-Finger Protein from Anisotropic Tumbling
-
Brüschweiler, R.; Liao, X.; Wright, P. E. Long-Range Motional Restrictions in a Multidomain Zinc-Finger Protein from Anisotropic Tumbling Science 1995, 268, 886-889
-
(1995)
Science
, vol.268
, pp. 886-889
-
-
Brüschweiler, R.1
Liao, X.2
Wright, P.E.3
-
21
-
-
85013746467
-
-
2 nd ed. Academic Press: San Diego, CA, USA.
-
Cavanagh, J.; Fairbrother, W. J.; Palmer, A. G.; Rance, M.; Skelton, N. J. Protein NMR Spectroscopy: Principles and Practice, 2 nd ed.; Academic Press: San Diego, CA, USA, 2007.
-
(2007)
Protein NMR Spectroscopy: Principles and Practice
-
-
Cavanagh, J.1
Fairbrother, W.J.2
Palmer, A.G.3
Rance, M.4
Skelton, N.J.5
-
24
-
-
84886624527
-
cWindow of Nanoseconds to Microseconds by Solution NMR Spectroscopy
-
cWindow of Nanoseconds to Microseconds by Solution NMR Spectroscopy Molecules 2013, 18, 11904-11937
-
(2013)
Molecules
, vol.18
, pp. 11904-11937
-
-
Ban, D.1
Sabo, T.M.2
Griesinger, C.3
Lee, D.4
-
25
-
-
45849131354
-
Recognition Dynamics Up to Microseconds Revealed from an RDC-Derived Ubiquitin Ensemble in Solution
-
Lange, O. F.; Lakomek, N.-A.; Fares, C.; Schroeder, G. F.; Walter, K. F. A.; Becker, S.; Meiler, J.; Grubmueller, H.; Griesinger, C.; de Groot, B. L. Recognition Dynamics Up to Microseconds Revealed from an RDC-Derived Ubiquitin Ensemble in Solution Science 2008, 320, 1471-1475
-
(2008)
Science
, vol.320
, pp. 1471-1475
-
-
Lange, O.F.1
Lakomek, N.-A.2
Fares, C.3
Schroeder, G.F.4
Walter, K.F.A.5
Becker, S.6
Meiler, J.7
Grubmueller, H.8
Griesinger, C.9
De Groot, B.L.10
-
26
-
-
80052470762
-
Prediction of Hydrodynamic and Other Solution Properties of Rigid Proteins from Atomic- and Residue-Level Models
-
Ortega, A.; Amoros, D.; Garcia de la Torre, J. Prediction of Hydrodynamic and Other Solution Properties of Rigid Proteins from Atomic- and Residue-Level Models Biophys. J. 2011, 101, 892-898
-
(2011)
Biophys. J.
, vol.101
, pp. 892-898
-
-
Ortega, A.1
Amoros, D.2
Garcia De La Torre, J.3
-
27
-
-
79952595565
-
The Numpy Array: A Structure for Efficient Numerical Computation
-
van der Walt, S.; Colbert, S. C.; Varoquaux, G. The Numpy Array: A Structure for Efficient Numerical Computation Comput. Sci. Eng. 2011, 13, 22-30
-
(2011)
Comput. Sci. Eng.
, vol.13
, pp. 22-30
-
-
Van Der Walt, S.1
Colbert, S.C.2
Varoquaux, G.3
-
28
-
-
34247481878
-
IPython: A System for Interactive Scientific Computing
-
Pérez, F.; Granger, B. E. IPython: A System for Interactive Scientific Computing Comput. Sci. Eng. 2007, 9, 21-29
-
(2007)
Comput. Sci. Eng.
, vol.9
, pp. 21-29
-
-
Pérez, F.1
Granger, B.E.2
-
30
-
-
77956641793
-
Solution Structure of the 128 kDa Enzyme i Dimer from Escherichia coli and Its 146 kDa Complex with HPr Using Residual Dipolar Couplings and Small- and Wide-Angle X-ray Scattering
-
Schwieters, C. D.; Suh, J. Y.; Grishaev, A.; Ghirlando, R.; Takayama, Y.; Clore, G. M. Solution Structure of the 128 kDa Enzyme I Dimer from Escherichia coli and Its 146 kDa Complex with HPr Using Residual Dipolar Couplings and Small- and Wide-Angle X-ray Scattering J. Am. Chem. Soc. 2010, 132, 13026-13045
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 13026-13045
-
-
Schwieters, C.D.1
Suh, J.Y.2
Grishaev, A.3
Ghirlando, R.4
Takayama, Y.5
Clore, G.M.6
-
31
-
-
0032702708
-
3+
-
3+FEBS Lett. 1999, 460, 519-526
-
(1999)
FEBS Lett.
, vol.460
, pp. 519-526
-
-
Biekofsky, R.R.1
Muskett, F.W.2
Schmidt, J.M.3
Martin, S.R.4
Browne, J.5
Bayley, P.M.6
Feeney, J.7
-
33
-
-
2342640750
-
Experimentally Exploring the Conformational Space Sampled by Domain Reorientation in Calmodulin
-
Bertini, I.; Del Bianco, C.; Gelis, I.; Katsaros, N.; Luchinat, C.; Parigi, G.; Peana, M.; Provenzani, A.; Zoroddu, M. A. Experimentally Exploring the Conformational Space Sampled by Domain Reorientation in Calmodulin Proc. Natl. Acad. Sci. U. S. A. 2004, 101, 6841-6846
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 6841-6846
-
-
Bertini, I.1
Del Bianco, C.2
Gelis, I.3
Katsaros, N.4
Luchinat, C.5
Parigi, G.6
Peana, M.7
Provenzani, A.8
Zoroddu, M.A.9
-
34
-
-
83055186781
-
Transient, Sparsely Populated Compact States of Apo and Calcium-Loaded Calmodulin Probed by Paramagnetic Relaxation Enhancement: Interplay of Conformational Selection and Induced Fit
-
Anthis, N. J.; Doucleff, M.; Clore, G. M. Transient, Sparsely Populated Compact States of Apo and Calcium-Loaded Calmodulin Probed by Paramagnetic Relaxation Enhancement: Interplay of Conformational Selection and Induced Fit J. Am. Chem. Soc. 2011, 133, 18966-18974
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 18966-18974
-
-
Anthis, N.J.1
Doucleff, M.2
Clore, G.M.3
-
35
-
-
84887727294
-
Interdomain Dynamics Explored by Paramagnetic NMR
-
Russo, L.; Maestre-Martinez, M.; Wolff, S.; Becker, S.; Griesinger, C. Interdomain Dynamics Explored by Paramagnetic NMR J. Am. Chem. Soc. 2013, 135, 17111-17120
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 17111-17120
-
-
Russo, L.1
Maestre-Martinez, M.2
Wolff, S.3
Becker, S.4
Griesinger, C.5
-
36
-
-
84862303541
-
Paramagnetic Relaxation Enhancement for the Characterization of the Conformational Heterogeneity in Two-Domain Proteins
-
Bertini, I.; Luchinat, C.; Nagulapalli, M.; Parigi, G.; Ravera, E. Paramagnetic Relaxation Enhancement for the Characterization of the Conformational Heterogeneity in Two-Domain Proteins Phys. Chem. Chem. Phys. 2012, 14, 9149-9156
-
(2012)
Phys. Chem. Chem. Phys.
, vol.14
, pp. 9149-9156
-
-
Bertini, I.1
Luchinat, C.2
Nagulapalli, M.3
Parigi, G.4
Ravera, E.5
-
37
-
-
80053025476
-
Estimation of Interdomain Flexibility of N-Terminus of Factor H Using Residual Dipolar Couplings
-
Maciejewski, M.; Tjandra, N.; Barlow, P. N. Estimation of Interdomain Flexibility of N-Terminus of Factor H Using Residual Dipolar Couplings Biochemistry 2011, 50, 8138-8149
-
(2011)
Biochemistry
, vol.50
, pp. 8138-8149
-
-
Maciejewski, M.1
Tjandra, N.2
Barlow, P.N.3
-
38
-
-
77957114696
-
Conformational Space of Flexible Biological Macromolecules from Average Data
-
Bertini, I.; Giachetti, A.; Luchinat, C.; Parigi, G.; Petoukhov, M. V.; Pierattelli, R.; Ravera, E.; Svergun, D. I. Conformational Space of Flexible Biological Macromolecules from Average Data J. Am. Chem. Soc. 2010, 132, 13553-13558
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 13553-13558
-
-
Bertini, I.1
Giachetti, A.2
Luchinat, C.3
Parigi, G.4
Petoukhov, M.V.5
Pierattelli, R.6
Ravera, E.7
Svergun, D.I.8
-
39
-
-
84887857671
-
Seeing the Invisible by Paramagnetic and Diamagnetic NMR
-
Clore, G. M. Seeing the Invisible by Paramagnetic and Diamagnetic NMR Biochem. Soc. Trans. 2013, 41, 1343-1354
-
(2013)
Biochem. Soc. Trans.
, vol.41
, pp. 1343-1354
-
-
Clore, G.M.1
-
40
-
-
84894280807
-
Interplay between Conformational Selection and Induced Fit in Multidomain Protein-Ligand Binding Probed by Paramagnetic Relaxation Enhancement
-
Clore, G. M. Interplay between Conformational Selection and Induced Fit in Multidomain Protein-Ligand Binding Probed by Paramagnetic Relaxation Enhancement Biophys. Chem. 2014, 186, 3-12
-
(2014)
Biophys. Chem.
, vol.186
, pp. 3-12
-
-
Clore, G.M.1
|