Diaporthe species associated with Vaccinium, with specific reference to Europe

Phytopathologia Mediterranea

Volumn 53, Issue 2, 2014, Pages 287-299

  Lombard, Lorenzo ^a   van Leeuwen, Gerard C M ^b   Guarnaccia, Vladimiro ^c   Polizzi, Giancarlo ^c   van Rijswick, Patricia C J ^b   Rosendahl, Karin C H M ^b   Gabler, Jutta ^d   Crous, Pedro W ^a,e,f  

^a CBS KNAW FUNGAL BIODIVERSITY CENTRE   (Netherlands)

^b National Plant Protection Organization (NPPO NL)   (Netherlands)

^c Dipartimento di Gestione dei Sistemi Agroalimentari e Ambientali   (Italy)

^d INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^e WAGENINGEN UNIVERSITY   (Netherlands)

^f UTRECHT UNIVERSITY   (Netherlands)

Author keywords

Diaporthe vaccinii; Quarantine

Indexed keywords

DIAPORTHE; DIAPORTHE VACCINII; VACCINIUM;

EID: 84907384398     PISSN: 00319465     EISSN: 15932095     Source Type: Journal    
DOI: 10.14601/Phytopathol_Mediterr-14034     Document Type: Article

References (49)

1. Baker J.J. 1972. Report on diseases of cultivated plants in England and Wales for the years 1957-1968. Ministry of Agriculture, Fisheries and Food Technical Bulletin 25, 148.
2. Caruso F.L. and D.C. Ramsdell (ed.), 1995. Compendium of Blueberry and Cranberry Diseases. APS Press, The American Phytopathological Society, St. Paul, U.S.A.
3. Chao C.P. and D.A. Glawe, 1985. Studies on the taxonomy of Diaporthe vaccinii. Mycotaxon 23, 371-381.
4. Crous P.W., W. Gams, J.A. Stalpers, V. Robert and G. Stegehuis, 2004. MycoBank: an online initiative to launch mycology into the 21st century. Studies in Mycology 50, 19-22.
5. Crous P.W., G.J.M Verkleij, J.Z. Groenewald and R.A. Samson (ed.), 2009. Fungal Biodiversity. CBS Laboratory Manual Series 1. Centraalbureau voor Schimmelcultures, Utrecht, Netherlands.
6. Cunningham C.W., 1997. Can three incongruence tests predict when data should be combined? Molecular Biology and Evolution 14, 733-740.
7. Dierking W., S. Dierking and W. Dierking, 1993. European Vaccinium species. Acta Horticulturae 346, 299-304.
8. Elfar K., R. Torres, G.A. Díaz and B.A. Latorre, 2013. Characterization of Diaporthe australafricana and Diaporthe spp. associated with stem canker of blueberry in Chile. Plant Disease http://dx.doi.org/10.1094/PDIS-11-12-1030-RE
9. European Union 2000. Council Directive 2000/29/EC, 8 May 2000, Brussels. http://eur-lex.europa.eu.
10. Faria A., J. Oliveira, P. Neves, P. Gameiro, C. Santos-Buelga, V. de Freitas and N. Mateus, 2005. Antioxidant properties of prepared blueberry (Vaccinium myrtillus) extracts. Journal of Agricultural and Food Chemistry 53, 6896-6902.
11. Farr D.F., L.A. Castlebury and A.Y. Rossman, 2002a. Morphological and molecular characterization of Phomopsis vaccinii and additional isolates of Phomopsis from blueberry and cranberry in the Eastern United States. Mycologia 94, 494-504.
12. Farr D.F., L.A. Castlebury, A.Y. Rossman and M.L. Putman, 2002b. A new species of Phomopsis causing twig dieback of Vaccinium vitis-idaea (lingonberry). Mycological Research 106, 745-752.
13. Gabler J., A. Kačergius and Z. Jovaišiene˙, 2004. Detection of Phomopsis vaccinii on blueberry and cranberry in Europe by Direct Tissue Blot Immunoassay and Plate-Trapped Antigen ELISA. Journal of Phytopathology 152, 630-632.
14. Gomes R.R., C. Glienke, S.I.R. Videira, L. Lombard, J.Z. Groenewald and P.W. Crous, 2013. Diaporthe: a genus of endophytic, saprobic and plant pathogenic fungi. Persoonia 31, 1-41.
15. Hawksworth D.L., P.W. Crous, S.A. Redhead, D.R. Reynolds, R.A. Samson, K.A. Seifert, J.W. Taylor, M.J. Wingfield, Ö. Abaci, C. Aime, J.C. Frisvad, 2011. The Amsterdam Declaration on Fungal Nomenclature. IMA Fungus 2, 105-112.
16. Kačergius A., Z. Jovaišiene˙ and A. Valuškaite˙, 2004. Phomopsis vaccinii on Vaccinium corymbosum in Lithuania. Botanica Lithuanica 10, 75-80.
17. Katoh K. and H. Toh, 2010. Parallelization of the MAFFT multiple sequence alignment program. Bioinformatics 26, 1889-1900.
18. Kirk P.M., J.A. Stalpers, U. Braun, P.W. Crous, K. Hansen, D.L. Hawksworth, K.D. Hyde, R. Lücking, T.H. Lumbsch, A.Y. Rossman, K.A. Seifert and M. Stadler, 2013. A withoutprejudice list of generic names of fungi for protection under the International Code of Nomenclature for algae, fungi, and plants. IMA Fungus 4, 381-443.
19. Latorre B.A., K. Elfar, J.G. Espinoza, R. Torres and G.A. Díaz, 2012. First report of Diaporthe australafricana associated with stem canker on blueberry in Chile. Plant Disease 96, 768.
20. Librado P. and J. Rozas, 2009. DnaSP v. 5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25, 1451-1452.
21. Mason-Gamer R. and E. Kellogg, 1996. Testing for phylogenetic conflict among molecular datasets in the tribe Triticeae (Graminae). Systematic Biology 45, 524-545.
22. Miller S.A., N. Patel and C.J. Stanley, 2006. Cranberry pests and diseases in New Zealand. Acta Horticulturae 715, 509- 512.
23. Mostert L., P.W. Crous, J.-C. Kang and A.J.L. Philips, 2001. Species of Phomopsis and a Libertella sp. occurring on grapevines with specific reference to South Africa: Morphological, cultural, molecular and pathological characterization. Mycologia 93, 146-167.
24. National Plant Protection Organization (NPPO), 2009. Diaporthe vaccinii - Blueberry twig blight - on one blueberry plant at one fruit production facility in The Netherlands. April 2009 PEST Report - The Netherlands.
25. National Plant Protection Organization (NPPO), 2013. Follow-up: Diaporthe vaccinii - Blueberry twig blight - on one blueberry plant at one fruit production facility in The Netherlands. April 2013 PEST Report - The Netherlands.
26. Naumann W.D., 1993. Overview of the Vaccinium industry in Western Europe. Acta Horticulturae 346, 53-58.
27. Nestby R., D. Percival, I. Martinussen, N. Opstad and J. Rohloff, 2012. The European blueberry (Vaccinium myrtillus L.) and the potential for cultivation. A review. The European Journal of Plant Science and Biotechnology 5, 5-16.
28. Niekerk J.M. van, J.Z. Groenewald, D.F. Farr, P.H. Fourie, F. Halleen and P.W. Crous, 2005. Reassessment of Phomopsis species on grapevines. Australasian Plant Pathology 34, 27-39.
29. Nylander J.A.A., 2004. MrModeltest v. 2. Programme distributed by the author. Evolutionary Biology Centre, Uppsala University.
30. Petrak F., 1924. Mycologische Notizen. VII. Annales Mycologici 22, 1-182.
31. Philips A.J.L., 1999. The relationship between Diaporthe perjuncta and Phomopsis viticola on grapevines. Mycologia 91, 1001-1007.
32. Prodorutti D., I. Pertot, L. Giongo and C. Gessler, 2007. Highbush Blueberry: Cultivation, protection, breeding and biotechnology. The European Journal of Plant Science and Biotechnology 1, 44-56.
33. Polashock J.J., 2006. Screening for resistance to Botryosphaeria stem blight and Phomopsis twig blight in blueberry. Acta Horticulturae 715, 493-495.
34. Rayner R.W.(ed.), 1970. A mycological colour chart. Commonwealth Mycological Institute, Kew, Surrey. British Mycological Society.
35. Ronquist F. and J.P. Huelsenbeck, 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
36. Schepers R.W.A., D.C. Crane, D.L. Whisson and E.S. Scott, 2000. The Diaporthe teleomorph of Phomopsis Taxon 1 on grapevine. Mycological Research 104, 226-231.
37. Shear C.L., N.E. Stevens and H.F. Bain, 1931. Fungus diseases of the cultivated cranberry. Technical Bulletin, United States Department of Agriculture 258, 7-8.
38. Smith H., M.J. Wingfield, P.W. Crous and T.A. Coutinho, 1996. Sphaeropsis sapinea and Botryosphaeria dothidea endophytic in Pinus spp. and Eucalyptus spp. in South Africa. South African Journal of Botany 62, 86-88.
39. Stamatakis A., P. Hoover and J. Rougemont, 2008.A rapid bootstrap algorithm for the RAxML web-servers. Systematic Biology 75, 758-771.
40. Stamatakis A., T. Ludwig and H. Meier, 2005. RaxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees. Bioinformatics 21, 456-463.
41. Swofford D.L., 2003. PAUP*. Phylogenetic analysis using parsimony (*and other methods), v. 4.0b10. Computer programme. Sinauer Associates, Sunderland, Massachusetts, USA..
42. Tadych M., M.S. Bergen, J. Johnson-Cicalese, J.J. Polashock, N. Vorsa and J.F. White Jr., 2012. Endophytic and pathogenic fungi of developing cranberry ovaries from flowers to mature fruit: diversity and succession. Fungal Diversity 54, 101-116.
43. Tamura K., D. Peterson, N. Peterson, G. Stecher, M. Nei and S. Kumar, 2011. MEGA5: Molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony methods. Molecular Biology and Evolution 28, 2731-2739.
44. Teodorescu G., V. Copaescu and S. Florea, 1985. The behaviour of some blueberry cultivars to the main mycoses in Romania. Acta Horticulturae 165, 159-165.
45. Udayanga D., X.Z. Liu, P.W. Crous, E.H.C. Mckenzie, E. Chukeatirote and K.D. Hyde, 2012. A multilocus phylogenetic evaluation of Diaporthe (Phomopsis). Fungal Diversity 56, 157-171.
46. Wehmeyer L.E., 1933. The genus Diaporthe Nitschke and its segregates. University of Michigan Studies Scientific Series 9, 1-349.
47. Weingartner D.P. and E.J. Klos, 1975. Etiology and symptomatology of canker and dieback diseases on highbush blueberries caused by Godronia (Fusicoccum) cassandrae and Diaporthe (Phomopsis) vaccinii. Phytopathology 65, 105-110.
48. Wilcox H.J. and M.A. Falconer, 1961. New or uncommon plant pests. Plant Pathology 10, 123-124.
49. Wingfield M.J., Z.W. de Beer, B. Slippers, B.D. Wingfield, J.Z. Groenewald, L. Lombard and P.W. Crous, 2012. One fungus one name promotes progressive plant pathology. Molecular Plant Pathology 13, 604-613.