Culturable heavy metal-resistant and plant growth promoting bacteria in V-Ti magnetite mine tailing soil from Panzhihua, China

PLoS ONE

Volumn 9, Issue 9, 2014, Pages

  Yu, Xiumei ^a   Li, Yanmei ^a   Zhang, Chu ^a   Liu, Huiying ^a   Liu, Jin ^a   Zheng, Wenwen ^a   Kang, Xia ^a   Leng, Xuejun ^a,b   Zhao, Ke ^a   Gu, Yunfu ^a   Zhang, Xiaoping ^a   Xiang, Quanju ^a   Chen, Qiang ^a  

^a SICHUAN AGRICULTURAL UNIVERSITY   (China)

^b Environmental Monitoring Station Panzhihua Municipal Environmental Protection Bureau   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CADMIUM; COBALT; COPPER; INDOLEACETIC ACID; LEAD; MAGNETITE; NICKEL; SIDEROPHORE; TITANIUM; VANADIUM; ZINC; HEAVY METAL;

ARTICLE; BACILLUS PUMILUS; BACILLUS SUBTILIS; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM CULTURE; BACTERIUM ISOLATE; CHINA; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; GENE IDENTIFICATION; MINE TAILINGS; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; OCHROBACTRUM; OCHROBACTRUM INTERMEDIUM; PHYSICAL CHEMISTRY; PHYSICAL TOLERANCE; PHYTOREMEDIATION; RHIZOBIUM; SOIL MICROFLORA; BACILLUS; BACTERIUM; METABOLISM; MICROBIOLOGY; MINING; PHYSIOLOGY; PLANT DEVELOPMENT;

BACILLUS; BACTERIA; METALS, HEAVY; MINING; OCHROBACTRUM; PLANT DEVELOPMENT; RHIZOBIUM; SIDEROPHORES; SOIL MICROBIOLOGY;

EID: 84907059217     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0106618     Document Type: Article

References (69)

1. Neuberger JS, Mulhall M, Pomatto MC, Sheverbush J, Hassanein RS (1990) Health problems in Galena, Kansas: a heavy metal mining Superfund site. Sci Total Environ 94: 261-272.
2. Saunders J, Jastrzembski B, Buckey J, Enriquez D, MacKenzie T, et al. (2012) Hearing loss and heavy metal toxicity in a Nicaraguan mining community: Audiological results and case reports. Audiol Neurootol 18: 101-113.
3. Ohlander J, Huber SM, Schomaker M, Heumann C, Schierl R, et al. (2013) Risk Factors for Mercury Exposure of Children in a Rural Mining Town in Northern Chile. PloS one 8: e79756.
4. Boularbah A, Schwartz C, Bitton G, Morel JL (2006) Heavy metal contamination from mining sites in South Morocco: 1. Use of a biotest to assess metal toxicity of tailings and soils. Chemosphere 63: 802-810.
5. Zhuang P, Lu H, Li Z, Zou B, McBride MB (2014) Multiple exposure and effects assessment of heavy metals in the population near mining area in South China. PloS one 9: e94484.
6. Mazej Z, Al Sayegh-Petkovšek S, Pokorny B (2010) Heavy metal concentrations in food chain of Lake Velenjsko jezero, Slovenia: an artificial lake from mining. Arch Environ Contam Toxicol 58: 998-1007.
7. Valverde A, González-Tirante M, Medina-Sierra M, Santa-Regina I, García-Sánchez A, et al. (2011) Diversity and community structure of culturable arsenic-resistant bacteria across a soil arsenic gradient at an abandoned tungsten-tin mining area. Chemosphere 85: 129-134.
8. Nielsen MN, Winding A (2002) Microorganisms as indicators of soil health. National Environmental Research Institute Denmark.
9. Gupta AK, Verma SK, Khan K, Verma RK (2013) Phytoremediation using aromatic plants: a sustainable approach for remediation of heavy metals polluted sites. Environ Sci Technol 47: 10115-10116.
10. Weyens N, van der Lelie D, Taghavi S, Newman L, Vangronsveld J (2009) Exploiting plant-microbe partnerships to improve biomass production and remediation. Trends Biotechnol 27: 591-598.
11. Fuentes-Ramirez LE, Jimenez-Salgado T, Abarca-Ocampo I, Caballero-Mellado J (1993) Acetobacter diazotrophicus, an indoleacetic acid producing bacterium isolated from sugarcane cultivars of Mexico. Plant Soil 154: 145-150.
12. Jaroszuk-͆ciselł J, Kurek E, Trytek M (2014) Efficiency of indoleacetic acid, gibberellic acid and ethylene synthesized in vitro by Fusarium culmorum strains with different effects on cereal growth. Biologia 69: 281-292.
13. Khan MS, Zaidi A, Wani PA, Oves M (2009) Role of plant growth promoting rhizobacteria in the remediation of metal contaminated soils. Environ Chem Lett 7: 1-19.
14. Tak HI, Ahmad F, Babalola OO (2013) Advances in the application of plant growth-promoting rhizobacteria in phytoremediation of heavy metals. Reviews of Rev Environ Contam Toxicol 223: 33-52.
15. Leinhos V, Bergmann H (1995) Influence of auxin producing rhizobacteria on root morphology and nutrient accumulation of crops, pt. 2: root growth promotion and nutrient accumulation of maize (Zea mays L.) by inoculation with indole-3-acetic acid (IAA) producing pseudomonas strains and by exogenously applied IAA under different water supply conditions. Angewandte Botanik (Germany).
16. Lippmann B, Leinhos V, Bergmann H (1995) Influence of auxin producing rhizobacteria on root morphology and nutrient accumulation of crops, pt. 1:changes in root morphology and nutrient accumulation in maize (Zea mays L.) caused by inoculation with indole-3-acetic acid (IAA) producing Pseudomonas and Acinetobacter strains or IAA applied exogenously. Angewandte Botanik (Germany).
17. Rajkumar M, Freitas H (2008) Influence of metal resistant-plant growth promoting bacteria on the growth of Ricinus communis in soil contaminated with heavy metals. Chemosphere 71: 834-842.
18. Olson JW, Mehta NS, Maier RJ (2001) Requirement of nickel metabolism proteins Hyp A and HypB for full activity of both hydrogenase and urease in Helicobacter pylori. Mol Microbiol 39: 176-182.
19. Sakamoto T, Bryant DA (2001) Requirement of nickel as an essential micronutrient for the utilization of urea in the marine cyanobacterium Synechococcus sp. PCC 7002. Plant Cell Physiol 42: 186.
20. Mishra VK, Upadhyaya AR, Pandey SK, Tripathi B (2008) Heavy metal pollution induced due to coal mining effluent on surrounding aquatic ecosystem and its management through naturally occurring aquatic macrophytes. Bioresour Technol 99: 930-936.
21. Ma Y, Prasad M, Rajkumar M, Freitas H (2011) Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils. Biotechnol Adv 29: 248-258.
22. Zhou M-F, Robinson PT, Lesher CM, Keays RR, Zhang C-J, et al. (2005) Geochemistry, petrogenesis and metallogenesis of the Panzhihua gabbroic layered intrusion and associated Fe-Ti-V oxide deposits, Sichuan Province, SW China. J Petrol 46: 2253-2280.
23. Yanguo T, Shijun N, Xianguo T, Chengjiang Z, Yuxiao M (2002) Geochemical baseline and trace metal pollution of soil in Panzhihua mining area. Chinese J Geochemistry 21: 274-281.
24. Yanguo T, Xianguo T, Shijun N, Chengjiang Z, Zhengqi X (2003) Environmental geochemistry of heavy metal contaminants in soil and streams ediment in Panzhihua mining and smelting area, Southwestern China. Chinese J Geochemistry 22: 253-262.
25. Larsson MA, Baken S, Gustafsson JP, Hadialhejazi G, Smolders E (2013) Vanadium bioavailability and toxicity to soil microorganisms and plants. Environ Toxicol Chem 32: 2266-2273.
26. Kužel S, Hruby M, Cígler P, Tlustoš P, Van Nguyen P (2003) Mechanism of physiological effects of titanium leaf sprays on plants grown on soil. Biol Trace Elem Res 91: 179-189.
27. Eckardt NA (2012) Pumping iron: conserved iron deficiency responses in the plant lineage. Plant Cell 24(10): 3855.
28. Venail PA, Vives MJ (2013) Positive effects of bacterial diversity on ecosystem functioning driven by complementarity effects in a bioremediation context. PloS one 8: e72561.
29. Li Z, Zhang G, Liu Y, Wan K, Zhang R, et al. (2013) Soil nutrient assessment for urban ecosystems in Hubei, China. PloS one 8: e75856.
30. Zhang S, Chen M, Li T, Xu X, Deng L (2010) A newly found cadmium accumulator- Malva sinensis Cavan. J Hazard Mater 173: 705-709.
31. Chang S, Hsu H, Cheng J, Tseng C-P (2011) An efficient strategy for broad-range detection of low abundance bacteria without DNA decontamination of PCR reagents. PloS one 6: e20303.
32. Martin B, Humbert O, Camara M, Guenzi E, Walker J, et al. (1992) A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae. Nucleic Acids Res 20: 3479-3483.
33. Tacão M, Alves A, Saavedra MJ, Correia A (2005) BOX-PCR is an adequate tool for typing Aeromonas spp. Antonie van Leeuwenhoek 88: 173-179.
34. Miller CS, Handley KM, Wrighton KC, Frischkorn KR, Thomas BC, et al. (2013) Short-read assembly of full-length 16S amplicons reveals bacterial diversity in subsurface sediments. PloS one 8: e56018.
35. Wilson KH, Blitchington R, Greene R (1990) Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction. J Clin Microbiol 28: 1942-1946.
36. Benson DA, Cavanaugh M, Clark K, Karsch-Mizrachi I, Lipman DJ, et al. (2012) GenBank. Nucleic acids research: gks1195.
37. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30: 2725-2729.
38. Bric JM, Bostock RM, Silverstone SE (1991) Rapid in situ assay for indoleacetic acid production by bacteria immobilized on a nitrocellulose membrane. Appl Environ Microb 57: 535-538.
39. Patten CL, Glick BR (2002) Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Appl Environ Microb 68: 3795-3801.
40. Schwyn B, Neilands J (1987) Universal chemical assay for the detection and determination of siderophores. Analytical biochemistry 160: 47-56.
41. Murugappan R, Rekha S, Thirumurugan R (2006) Characterization and quantification of siderophores produced by Aeromonas hydrophila isolated from Cyprinus carpio. Pak J Biol Sci 9: 437-440.
42. Rodríguez L, Ruiz E, Alonso-Azcárate J, Rincón J (2009) Heavy metal distribution and chemical speciation in tailings and soils around a Pb-Zn mine in Spain. J Environ Manage 90: 1106-1116.
43. Tripathi BM, Kim M, Singh D, Lee-Cruz L, Lai-Hoe A, et al. (2012) Tropicalsoil bacterial communities in Malaysia: pH dominates in the equatorial tropicstoo. Microbial Ecol 64: 474-484.
44. Lauber CL, Hamady M, Knight R, Fierer N (2009) Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microb 75: 5111-5120.
45. Brady NC, Weil RR (1996) The nature and properties of soils. Prentice-Hall Inc.
46. Shacklette HT, Boerngen JG (1984) Element concentrations in soils and other surficial materials of the conterminous United States.
47. Abreu CAd, van Raij B, Abreu MFd González AP (2005) Routine soil testing to monitor heavy metals boron. Sci Agr 62: 564-571.
48. Peralta-Videa J, Gardea-Torresdey J, Gomez E, Tiemann K, Parsons J, et al. (2002) Effect of mixed cadmium, copper, nickel and zinc at different pHs upon alfalfa growth and heavy metal uptake. Environ Pollut 119: 291-301.
49. Das S, Mishra J, Das SK, Pandey S, Rao DS, et al. (2014) Investigation on mechanism of Cr (VI) reduction and removal by Bacillus amyloliquefaciens, a novel chromate tolerant bacterium isolated from chromite mine soil. Chemosphere 96: 112-121.
50. Govarthanan M, Lee K-J, Cho M, Kim JS, Kamala-Kannan S, et al. (2013) Significance of autochthonous Bacillus sp. KK1 on biomineralization of lead in mine tailings. Chemosphere 90: 2267-2272.
51. Cheng Y, Yan F, Huang F, Chu W, Pan D, et al. (2010) Bioremediation of Cr (VI) and immobilization as Cr (III) by Ochrobactrum anthropi. Environ Sci Technol 44: 6357-6363.
52. Pandey S, Ghosh PK, Ghosh S, De TK, Maiti TK (2013) Role of heavy metal resistant Ochrobactrum sp. and Bacillus spp. strains in bioremediation of a rice cultivar and their PGPR like activities. J Microbiol 51: 11-17.
53. Wasi S, Tabrez S, Ahmad M (2013) Use of Pseudomonas spp. for the bioremediation of environmental pollutants: a review. Environ Monit Assess 185: 8147-8155.
54. Ike A, Sriprang R, Ono H, Murooka Y, Yamashita M (2007) Bioremediation of cadmium contaminated soil using symbiosis between leguminous plant and recombinant rhizobia with the MTL4 and the PCS genes. Chemosphere 66: 1670-1676.
55. Sriprang R, Hayashi M, Yamashita M, Ono H, Saeki K, et al. (2002) A novel bioremediation system for heavy metals using the symbiosis between leguminous plant and genetically engineered rhizobia. J Biotechnol 99: 279-293.
56. Pumpel T, Paknikar KM (2001) Bioremediation technologies for metal containing wastewaters using metabolically active microorganisms. Adv Appl microbiol 48: 135-171.
57. Xie X, Fu J, Wang H, Liu J (2010) Heavy metal resistance by two bacteria strains isolated from a copper mine tailing in China. Afr J Biotechnol 9: 4056-4066.
58. Bafana A, Krishnamurthi K, Patil M and Chakrabarti T (2010) Heavy metal resistance in Arthrobacter ramosus strain G2 isolated from mercuric salt-contaminated soil. J Hazard Mater 177: 481-486.
59. Joseph B, Ranjan Patra R, Lawrence R (2012) Characterization of plant growth promoting rhizobacteria associated with chickpea (Cicer arietinum L.). Intl J Plant Prod 1: 141-152.
60. Roszak D, Colwell R (1987) Survival strategies of bacteria in the natural environment. Microbiol Rev 51: 365.
61. Ahmad F, Ahmad I, Khan M (2008) Screening of free-living rhizospheric bacteria for their multiple plant growth promoting activities. Microbiol Res 163: 173-181.
62. Leinhos V, Bergmann H (1995) Influence of auxin producing rhizobacteria on root morphology and nutrient accumulation of maize (Zea mays L.) by inoculation with indol-3-acetic acid (IAA) producing Pseudomonas strains and by exogenously applied IAA under different water supply conditions. Angew Bot 69: 37-42.
63. Kuffner M, De Maria S, Puschenreiter M, Fallmann K, Wieshammer G, et al. (2010) Culturable bacteria from Zn-and Cd-accumulating Salix caprea with differential effects on plant growth and heavy metal availability. J App Microbiol 108: 1471-1484.
64. Xie H, Pasternak J, Glick BR (1996) Isolation and characterization of mutants of the plant growth-promoting rhizobacterium Pseudomonas putida GR12-2 that over produce indoleacetic acid. Curr Microbiol 32: 67-71.
65. Sayyed R, Chincholkar S (2010) Growth and siderophores production in Alcaligenes faecalis is regulated by metal ions. Indian H Microbiol 50: 179-182.
66. Rajkumar M, Ae N, Prasad MN, Freitas H (2010) Potential of siderophore-producing bacteria for improving heavy metal phytoextraction. Trends Biotechnol 28: 142-149.
67. Braud A, Jezequel K, Bazot S, Lebeau T (2009) Enhanced phytoextraction of an agricultural Cr- and Pb-contaminated soil by bioaugmentation with side-rophore-producing bacteria. Chemosphere 74: 280-286.
68. Adler C, Corbalán NS, Seyedsayamdost MR, Pomares MF, de Cristóbal RE, et al. (2012) Catecholate siderophores protect bacteria from pyochelin toxicity. PloS one 7: e46754.
69. Glick BR (2010) Using soil bacteria to facilitate phytoremediation. Biotechnol Adv 28: 367-374.