-
1
-
-
84860821329
-
Structure unifies the viral universe
-
Abrescia NG, Bamford DH, Grimes JM, Stuart DI, (2012) Structure unifies the viral universe. Annu Rev Biochem 81: 795-822
-
(2012)
Annu Rev Biochem
, vol.81
, pp. 795-822
-
-
Abrescia, N.G.1
Bamford, D.H.2
Grimes, J.M.3
Stuart, D.I.4
-
2
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, McCoy AJ, Moriarty NW, Oeffner R, Read RJ, Richardson DC, Richardson JS, Terwilliger TC, Zwart PH, (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66: 213-221
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
McCoy, A.J.11
Moriarty, N.W.12
Oeffner, R.13
Read, R.J.14
Richardson, D.C.15
Richardson, J.S.16
Terwilliger, T.C.17
Zwart, P.H.18
-
4
-
-
34147110201
-
Quasi-atomic model of bacteriophage T7 procapsid shell: Insights into the structure and evolution of a basic fold
-
Agirrezabala X, Velazquez-Muriel JA, Gomez-Puertas P, Scheres SH, Carazo JM, Carrascosa JL, (2007) Quasi-atomic model of bacteriophage T7 procapsid shell: insights into the structure and evolution of a basic fold. Structure 15: 461-472
-
(2007)
Structure
, vol.15
, pp. 461-472
-
-
Agirrezabala, X.1
Velazquez-Muriel, J.A.2
Gomez-Puertas, P.3
Scheres, S.H.4
Carazo, J.M.5
Carrascosa, J.L.6
-
5
-
-
34247209698
-
The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses
-
Akita F, Chong KT, Tanaka H, Yamashita E, Miyazaki N, Nakaishi Y, Suzuki M, Namba K, Ono Y, Tsukihara T, Nakagawa A, (2007) The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses. J Mol Biol 368: 1469-1483
-
(2007)
J Mol Biol
, vol.368
, pp. 1469-1483
-
-
Akita, F.1
Chong, K.T.2
Tanaka, H.3
Yamashita, E.4
Miyazaki, N.5
Nakaishi, Y.6
Suzuki, M.7
Namba, K.8
Ono, Y.9
Tsukihara, T.10
Nakagawa, A.11
-
6
-
-
77953807027
-
The Ferritin-like superfamily: Evolution of the biological iron storeman from a rubrerythrin-like ancestor
-
Andrews SC, (2010) The Ferritin-like superfamily: evolution of the biological iron storeman from a rubrerythrin-like ancestor. Biochim Biophys Acta 1800: 691-705
-
(2010)
Biochim Biophys Acta
, vol.1800
, pp. 691-705
-
-
Andrews, S.C.1
-
7
-
-
27744487093
-
Common ancestry of herpesviruses and tailed DNA bacteriophages
-
Baker ML, Jiang W, Rixon FJ, Chiu W, (2005) Common ancestry of herpesviruses and tailed DNA bacteriophages. J Virol 79: 14967-14970
-
(2005)
J Virol
, vol.79
, pp. 14967-14970
-
-
Baker, M.L.1
Jiang, W.2
Rixon, F.J.3
Chiu, W.4
-
8
-
-
0031257718
-
A method for establishing the handedness of biological macromolecules
-
Belnap DM, Olson NH, Baker TS, (1997) A method for establishing the handedness of biological macromolecules. J Struct Biol 120: 44-51
-
(1997)
J Struct Biol
, vol.120
, pp. 44-51
-
-
Belnap, D.M.1
Olson, N.H.2
Baker, T.S.3
-
9
-
-
0037282736
-
The variance of icosahedral virus models is a key indicator in the structure determination: A model-free reconstruction of viruses, suitable for refractory particles
-
Cantele F, Lanzavecchia S, Bellon PL, (2003) The variance of icosahedral virus models is a key indicator in the structure determination: a model-free reconstruction of viruses, suitable for refractory particles. J Struct Biol 141: 84-92
-
(2003)
J Struct Biol
, vol.141
, pp. 84-92
-
-
Cantele, F.1
Lanzavecchia, S.2
Bellon, P.L.3
-
10
-
-
23044510524
-
A resolution criterion for electron tomography based on cross-validation
-
Cardone G, Grünewald K, Steven AC, (2005) A resolution criterion for electron tomography based on cross-validation. J Struct Biol 151: 117-129
-
(2005)
J Struct Biol
, vol.151
, pp. 117-129
-
-
Cardone, G.1
Grünewald, K.2
Steven, A.C.3
-
11
-
-
84858240360
-
Procapsid assembly, maturation, nuclear exit: Dynamic steps in the production of infectious herpesvirions
-
Cardone G, Heymann JB, Cheng N, Trus BL, Steven AC, (2012) Procapsid assembly, maturation, nuclear exit: dynamic steps in the production of infectious herpesvirions. Adv Exp Med Biol 726: 423-439
-
(2012)
Adv Exp Med Biol
, vol.726
, pp. 423-439
-
-
Cardone, G.1
Heymann, J.B.2
Cheng, N.3
Trus, B.L.4
Steven, A.C.5
-
12
-
-
0032751908
-
Tetrairidium, a four-atom cluster, is readily visible as a density label in three-dimensional cryo-EM maps of proteins at 10-25 Å resolution
-
Cheng N, Conway JF, Watts NR, Hainfeld JF, Joshi V, Powell RD, Stahl SJ, Wingfield PE, Steven AC, (1999) Tetrairidium, a four-atom cluster, is readily visible as a density label in three-dimensional cryo-EM maps of proteins at 10-25 Å resolution. J Struct Biol 127: 169-176
-
(1999)
J Struct Biol
, vol.127
, pp. 169-176
-
-
Cheng, N.1
Conway, J.F.2
Watts, N.R.3
Hainfeld, J.F.4
Joshi, V.5
Powell, R.D.6
Stahl, S.J.7
Wingfield, P.E.8
Steven, A.C.9
-
13
-
-
0036310396
-
Handedness of the herpes simplex virus capsid and procapsid
-
Cheng N, Trus BL, Belnap DM, Newcomb WW, Brown JC, Steven AC, (2002) Handedness of the herpes simplex virus capsid and procapsid. J Virol 76: 7855-7859
-
(2002)
J Virol
, vol.76
, pp. 7855-7859
-
-
Cheng, N.1
Trus, B.L.2
Belnap, D.M.3
Newcomb, W.W.4
Brown, J.C.5
Steven, A.C.6
-
14
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project.
-
Collaborative Computational Project (1994) The CCP4 suite: programs for protein crystallography. Acta Crystallogr D Biol Crystallogr 50: 760-763
-
(1994)
Acta Crystallogr D Biol Crystallogr
, vol.50
, pp. 760-763
-
-
-
15
-
-
0028847173
-
Proteolytic and conformational control of virus capsid maturation: The bacteriophage HK97 system
-
Conway JF, Duda RL, Cheng N, Hendrix RW, Steven AC, (1995) Proteolytic and conformational control of virus capsid maturation: the bacteriophage HK97 system. J Mol Biol 253: 86-99
-
(1995)
J Mol Biol
, vol.253
, pp. 86-99
-
-
Conway, J.F.1
Duda, R.L.2
Cheng, N.3
Hendrix, R.W.4
Steven, A.C.5
-
16
-
-
0035957688
-
Virus maturation involving large subunit rotations and local refolding
-
Conway JF, Wikoff WR, Cheng N, Duda RL, Hendrix RW, Johnson JE, Steven AC, (2001) Virus maturation involving large subunit rotations and local refolding. Science 292: 744-748
-
(2001)
Science
, vol.292
, pp. 744-748
-
-
Conway, J.F.1
Wikoff, W.R.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Johnson, J.E.6
Steven, A.C.7
-
17
-
-
79959209134
-
Iron homeostasis and management of oxidative stress response in bacteria
-
Cornelis P, Wei Q, Andrews SC, Vinckx T, (2011) Iron homeostasis and management of oxidative stress response in bacteria. Metallomics 3: 540-549.
-
(2011)
Metallomics
, vol.3
, pp. 540-549
-
-
Cornelis, P.1
Wei, Q.2
Andrews, S.C.3
Vinckx, T.4
-
18
-
-
84871435690
-
Evolution of intracellular compartmentalization
-
Diekmann Y, Pereira-Leal JB, (2013) Evolution of intracellular compartmentalization. Biochem J 449: 319-331
-
(2013)
Biochem J
, vol.449
, pp. 319-331
-
-
Diekmann, Y.1
Pereira-Leal, J.B.2
-
19
-
-
0028969695
-
Structural transitions during bacteriophage HK97 head assembly
-
Duda RL, Hempel J, Michel H, Shabanowitz J, Hunt D, Hendrix RW, (1995) Structural transitions during bacteriophage HK97 head assembly. J Mol Biol 247: 618-635
-
(1995)
J Mol Biol
, vol.247
, pp. 618-635
-
-
Duda, R.L.1
Hempel, J.2
Michel, H.3
Shabanowitz, J.4
Hunt, D.5
Hendrix, R.W.6
-
20
-
-
77949535720
-
Features and development of Coot
-
Emsley P, Lohkamp B, Scott WG, Cowtan K, (2010) Features and development of Coot. Acta Crystallogr D Biol Crystallogr 66: 486-501
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
21
-
-
77952135283
-
Short N-terminal sequences package proteins into bacterial microcompartments
-
Fan C, Cheng S, Liu Y, Escobar CM, Crowley CS, Jefferson RE, Yeates TO, Bobik TA, (2010) Short N-terminal sequences package proteins into bacterial microcompartments. Proc Natl Acad Sci USA 107: 7509-7514
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 7509-7514
-
-
Fan, C.1
Cheng, S.2
Liu, Y.3
Escobar, C.M.4
Crowley, C.S.5
Jefferson, R.E.6
Yeates, T.O.7
Bobik, T.A.8
-
22
-
-
84891782659
-
Pfam: The protein families database
-
Finn RD, Bateman A, Clements J, Coggill P, Eberhardt RY, Eddy SR, Heger A, Hetherington K, Holm L, Mistry J, Sonnhammer EL, Tate J, Punta M, (2014) Pfam: the protein families database. Nucleic Acids Res 42: D222-D230
-
(2014)
Nucleic Acids Res
, vol.42
-
-
Finn, R.D.1
Bateman, A.2
Clements, J.3
Coggill, P.4
Eberhardt, R.Y.5
Eddy, S.R.6
Heger, A.7
Hetherington, K.8
Holm, L.9
Mistry, J.10
Sonnhammer, E.L.11
Tate, J.12
Punta, M.13
-
23
-
-
18844400837
-
Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry
-
Fokine A, Leiman PG, Shneider MM, Ahvazi B, Boeshans KM, Steven AC, Black LW, Mesyanzhinov VV, Rossmann MG, (2005) Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry. Proc Natl Acad Sci USA 102: 7163-7168
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7163-7168
-
-
Fokine, A.1
Leiman, P.G.2
Shneider, M.M.3
Ahvazi, B.4
Boeshans, K.M.5
Steven, A.C.6
Black, L.W.7
Mesyanzhinov, V.V.8
Rossmann, M.G.9
-
25
-
-
63849128084
-
An unexpected twist in viral capsid maturation
-
Gertsman I, Gan L, Guttman M, Lee K, Speir JA, Duda RL, Hendrix RW, Komives EA, Johnson JE, (2009) An unexpected twist in viral capsid maturation. Nature 458: 646-650
-
(2009)
Nature
, vol.458
, pp. 646-650
-
-
Gertsman, I.1
Gan, L.2
Guttman, M.3
Lee, K.4
Speir, J.A.5
Duda, R.L.6
Hendrix, R.W.7
Komives, E.A.8
Johnson, J.E.9
-
26
-
-
33748299288
-
Evolution of sensory complexity recorded in a myxobacterial genome
-
Goldman BS, Nierman WC, Kaiser D, Slater SC, Durkin AS, Eisen JA, Ronning CM, Barbazuk WB, Blanchard M, Field C, Halling C, Hinkle G, Iartchuk O, Kim HS, Mackenzie C, Madupu R, Miller N, Shvartsbeyn A, Sullivan SA, Vaudin M, et al, (2006) Evolution of sensory complexity recorded in a myxobacterial genome. Proc Natl Acad Sci USA 103: 15200-15205
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 15200-15205
-
-
Goldman, B.S.1
Nierman, W.C.2
Kaiser, D.3
Slater, S.C.4
Durkin, A.S.5
Eisen, J.A.6
Ronning, C.M.7
Barbazuk, W.B.8
Blanchard, M.9
Field, C.10
Halling, C.11
Hinkle, G.12
Iartchuk, O.13
Kim, H.S.14
MacKenzie, C.15
Madupu, R.16
Miller, N.17
Shvartsbeyn, A.18
Sullivan, S.A.19
Vaudin, M.20
more..
-
27
-
-
78649905337
-
Amyloid structure and assembly: Insights from scanning transmission electron microscopy
-
Goldsbury C, Baxa U, Simon MN, Steven AC, Engel A, Wall JS, Aebi U, Muller SA, (2011) Amyloid structure and assembly: insights from scanning transmission electron microscopy. J Struct Biol 173: 1-13
-
(2011)
J Struct Biol
, vol.173
, pp. 1-13
-
-
Goldsbury, C.1
Baxa, U.2
Simon, M.N.3
Steven, A.C.4
Engel, A.5
Wall, J.S.6
Aebi, U.7
Muller, S.A.8
-
28
-
-
0030608152
-
The ferritins: Molecular properties, iron storage function and cellular regulation
-
Harrison PM, Arosio P, (1996) The ferritins: molecular properties, iron storage function and cellular regulation. Biochim Biophys Acta 1275: 161-203
-
(1996)
Biochim Biophys Acta
, vol.1275
, pp. 161-203
-
-
Harrison, P.M.1
Arosio, P.2
-
29
-
-
80051922235
-
Fossil record of an archaeal HK97-like provirus
-
Heinemann J, Maaty WS, Gauss GH, Akkaladevi N, Brumfield SK, Rayaprolu V, Young MJ, Lawrence CM, Bothner B, (2011) Fossil record of an archaeal HK97-like provirus. Virology 417: 362-368
-
(2011)
Virology
, vol.417
, pp. 362-368
-
-
Heinemann, J.1
Maaty, W.S.2
Gauss, G.H.3
Akkaladevi, N.4
Brumfield, S.K.5
Rayaprolu, V.6
Young, M.J.7
Lawrence, C.M.8
Bothner, B.9
-
30
-
-
84863242478
-
Bacteriophage HK97 capsid assembly and maturation
-
Hendrix RW, Johnson JE, (2012) Bacteriophage HK97 capsid assembly and maturation. Adv Exp Med Biol 726: 351-363
-
(2012)
Adv Exp Med Biol
, vol.726
, pp. 351-363
-
-
Hendrix, R.W.1
Johnson, J.E.2
-
31
-
-
0037406441
-
Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy
-
Heymann JB, Cheng N, Newcomb WW, Trus BL, Brown JC, Steven AC, (2003) Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy. Nat Struct Biol 10: 334-341
-
(2003)
Nat Struct Biol
, vol.10
, pp. 334-341
-
-
Heymann, J.B.1
Cheng, N.2
Newcomb, W.W.3
Trus, B.L.4
Brown, J.C.5
Steven, A.C.6
-
32
-
-
33845336533
-
Bsoft: Image processing and molecular modeling for electron microscopy
-
Heymann JB, Belnap DM, (2007) Bsoft: image processing and molecular modeling for electron microscopy. J Struct Biol 157: 3-18
-
(2007)
J Struct Biol
, vol.157
, pp. 3-18
-
-
Heymann, J.B.1
Belnap, D.M.2
-
33
-
-
0032438034
-
Homomultimeric protease in the hyperthermophilic bacterium Thermotoga maritima has structural and amino acid sequence homology to bacteriocins in mesophilic bacteria
-
Hicks PM, Rinker KD, Baker JR, Kelly RM, (1998) Homomultimeric protease in the hyperthermophilic bacterium Thermotoga maritima has structural and amino acid sequence homology to bacteriocins in mesophilic bacteria. FEBS Lett 440: 393-398
-
(1998)
FEBS Lett
, vol.440
, pp. 393-398
-
-
Hicks, P.M.1
Rinker, K.D.2
Baker, J.R.3
Kelly, R.M.4
-
34
-
-
0018293841
-
Genetics of gliding motility in Myxococcus xanthus (Myxobacterales): Two gene systems control movement
-
Hodgkin J, Kaiser D, (1979) Genetics of gliding motility in Myxococcus xanthus (Myxobacterales): two gene systems control movement. Mol Gen Genet 171: 177-191
-
(1979)
Mol Gen Genet
, vol.171
, pp. 177-191
-
-
Hodgkin, J.1
Kaiser, D.2
-
35
-
-
84883272572
-
Structure of the pseudorabies virus capsid: Comparison with herpes simplex virus type 1 and differential binding of essential minor proteins
-
Homa FL, Huffman JB, Toropova K, Lopez HR, Makhov AM, Conway JF, (2013) Structure of the pseudorabies virus capsid: comparison with herpes simplex virus type 1 and differential binding of essential minor proteins. J Mol Biol 425: 3415-3428
-
(2013)
J Mol Biol
, vol.425
, pp. 3415-3428
-
-
Homa, F.L.1
Huffman, J.B.2
Toropova, K.3
Lopez, H.R.4
Makhov, A.M.5
Conway, J.F.6
-
36
-
-
79953887810
-
The Prohead-I structure of bacteriophage HK97: Implications for scaffold-mediated control of particle assembly and maturation
-
Huang RK, Khayat R, Lee KK, Gertsman I, Duda RL, Hendrix RW, Johnson JE, (2011a) The Prohead-I structure of bacteriophage HK97: implications for scaffold-mediated control of particle assembly and maturation. J Mol Biol 408: 541-554
-
(2011)
J Mol Biol
, vol.408
, pp. 541-554
-
-
Huang, R.K.1
Khayat, R.2
Lee, K.K.3
Gertsman, I.4
Duda, R.L.5
Hendrix, R.W.6
Johnson, J.E.7
-
37
-
-
78650670099
-
Transferrin-mediated targeting of bacteriophage HK97 nanoparticles into tumor cells
-
Huang RK, Steinmetz NF, Fu CY, Manchester M, Johnson JE, (2011b) Transferrin-mediated targeting of bacteriophage HK97 nanoparticles into tumor cells. Nanomedicine (Lond) 6: 55-68
-
(2011)
Nanomedicine (Lond)
, vol.6
, pp. 55-68
-
-
Huang, R.K.1
Steinmetz, N.F.2
Fu, C.Y.3
Manchester, M.4
Johnson, J.E.5
-
38
-
-
31844435708
-
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus
-
Jiang W, Chang J, Jakana J, Weigele P, King J, Chiu W, (2006) Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus. Nature 439: 612-616
-
(2006)
Nature
, vol.439
, pp. 612-616
-
-
Jiang, W.1
Chang, J.2
Jakana, J.3
Weigele, P.4
King, J.5
Chiu, W.6
-
39
-
-
0018536781
-
Social gliding is correlated with the presence of pili in Myxococcus xanthus
-
Kaiser D, (1979) Social gliding is correlated with the presence of pili in Myxococcus xanthus. Proc Natl Acad Sci USA 76: 5952-5956
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 5952-5956
-
-
Kaiser, D.1
-
41
-
-
71549160364
-
Operon required for fruiting body development in Myxococcus xanthus
-
Kim D, Chung J, Hyun H, Lee C, Lee K, Cho K, (2009) Operon required for fruiting body development in Myxococcus xanthus. J Microbiol Biotechnol 19: 1288-1294
-
(2009)
J Microbiol Biotechnol
, vol.19
, pp. 1288-1294
-
-
Kim, D.1
Chung, J.2
Hyun, H.3
Lee, C.4
Lee, K.5
Cho, K.6
-
42
-
-
0030586823
-
Checking your imagination: Applications of the free R value
-
Kleywegt GJ, Brunger AT, (1996) Checking your imagination: applications of the free R value. Structure 4: 897-904
-
(1996)
Structure
, vol.4
, pp. 897-904
-
-
Kleywegt, G.J.1
Brunger, A.T.2
-
43
-
-
0030498233
-
XdlMAPMAN and xdlDATAMAN - Programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets
-
Kleywegt GJ, Jones TA, (1996) xdlMAPMAN and xdlDATAMAN-programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets. Acta Crystallogr D Biol Crystallogr 52: 826-828
-
(1996)
Acta Crystallogr D Biol Crystallogr
, vol.52
, pp. 826-828
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
44
-
-
84864020098
-
Myxococcus xanthus developmental cell fate production: Heterogeneous accumulation of developmental regulatory proteins and reexamination of the role of MazF in developmental lysis
-
Lee B, Holkenbrink C, Treuner-Lange A, Higgs PI, (2012a) Myxococcus xanthus developmental cell fate production: heterogeneous accumulation of developmental regulatory proteins and reexamination of the role of MazF in developmental lysis. J Bacteriol 194: 3058-3068
-
(2012)
J Bacteriol
, vol.194
, pp. 3058-3068
-
-
Lee, B.1
Holkenbrink, C.2
Treuner-Lange, A.3
Higgs, P.I.4
-
45
-
-
84859780045
-
Spatial organization of enzymes for metabolic engineering
-
Lee H, DeLoache WC, Dueber JE, (2012b) Spatial organization of enzymes for metabolic engineering. Metab Eng 14: 242-251
-
(2012)
Metab Eng
, vol.14
, pp. 242-251
-
-
Lee, H.1
Deloache, W.C.2
Dueber, J.E.3
-
46
-
-
2942558543
-
Ferritin reactions: Direct identification of the site for the diferric peroxide reaction intermediate
-
Liu X, Theil EC, (2004) Ferritin reactions: direct identification of the site for the diferric peroxide reaction intermediate. Proc Natl Acad Sci USA 101: 8557-8562
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 8557-8562
-
-
Liu, X.1
Theil, E.C.2
-
47
-
-
77956258367
-
Mycobacterial MazG is a novel NTP pyrophosphohydrolase involved in oxidative stress response
-
Lu LD, Sun Q, Fan XY, Zhong Y, Yao YF, Zhao GP, (2010) Mycobacterial MazG is a novel NTP pyrophosphohydrolase involved in oxidative stress response. J Biol Chem 285: 28076-28085
-
(2010)
J Biol Chem
, vol.285
, pp. 28076-28085
-
-
Lu, L.D.1
Sun, Q.2
Fan, X.Y.3
Zhong, Y.4
Yao, Y.F.5
Zhao, G.P.6
-
48
-
-
25644458666
-
Automated electron microscope tomography using robust prediction of specimen movements
-
Mastronarde DN, (2005) Automated electron microscope tomography using robust prediction of specimen movements. J Struct Biol 152: 36-51
-
(2005)
J Struct Biol
, vol.152
, pp. 36-51
-
-
Mastronarde, D.N.1
-
49
-
-
0000803940
-
Ferritin: III the magnetic properties of ferritin and some other colloidal ferric compounds
-
Michaelis L, Coryell CD, Granick S, (1943) Ferritin: III. The magnetic properties of ferritin and some other colloidal ferric compounds. J Biol Chem 148: 463-480
-
(1943)
J Biol Chem
, vol.148
, pp. 463-480
-
-
Michaelis, L.1
Coryell, C.D.2
Granick, S.3
-
50
-
-
84869022036
-
Packaging accessory protein P7 and polymerase P2 have mutually occluding binding sites inside the bacteriophage φ6 procapsid
-
Nemecek D, Qiao J, Mindich L, Steven AC, Heymann JB, (2012) Packaging accessory protein P7 and polymerase P2 have mutually occluding binding sites inside the bacteriophage φ6 procapsid. J Virol 86: 11616-11624
-
(2012)
J Virol
, vol.86
, pp. 11616-11624
-
-
Nemecek, D.1
Qiao, J.2
Mindich, L.3
Steven, A.C.4
Heymann, J.B.5
-
51
-
-
77649128082
-
P22 coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical crosslinks
-
Parent KN, Khayat R, Tu LH, Suhanovsky MM, Cortines JR, Teschke CM, Johnson JE, Baker TS, (2010) P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks. Structure 18: 390-401
-
(2010)
Structure
, vol.18
, pp. 390-401
-
-
Parent, K.N.1
Khayat, R.2
Tu, L.H.3
Suhanovsky, M.M.4
Cortines, J.R.5
Teschke, C.M.6
Johnson, J.E.7
Baker, T.S.8
-
52
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE, (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J Comput Chem 25: 1605-1612
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
53
-
-
84876887523
-
Assembly in vitro of Rhodococcus jostii RHA1 encapsulin and peroxidase DypB to form a nanocompartment
-
Rahmanpour R, Bugg TD, (2013) Assembly in vitro of Rhodococcus jostii RHA1 encapsulin and peroxidase DypB to form a nanocompartment. FEBS J 280: 2097-2104
-
(2013)
FEBS J
, vol.280
, pp. 2097-2104
-
-
Rahmanpour, R.1
Bugg, T.D.2
-
54
-
-
0031813213
-
Identification and characterization of a 29-kilodalton protein from Mycobacterium tuberculosis culture filtrate recognized by mouse memory effector cells
-
Rosenkrands I, Rasmussen PB, Carnio M, Jacobsen S, Theisen M, Andersen P, (1998) Identification and characterization of a 29-kilodalton protein from Mycobacterium tuberculosis culture filtrate recognized by mouse memory effector cells. Infect Immun 66: 2728-2735
-
(1998)
Infect Immun
, vol.66
, pp. 2728-2735
-
-
Rosenkrands, I.1
Rasmussen, P.B.2
Carnio, M.3
Jacobsen, S.4
Theisen, M.5
Andersen, P.6
-
55
-
-
84866078359
-
Prevention of overfitting in cryo-EM structure determination
-
Scheres SH, Chen S, (2012) Prevention of overfitting in cryo-EM structure determination. Nature Meth 9: 853-854
-
(2012)
Nature Meth
, vol.9
, pp. 853-854
-
-
Scheres, S.H.1
Chen, S.2
-
56
-
-
34247093347
-
Mass analysis by scanning transmission electron microscopy and electron diffraction validate predictions of stacked beta-solenoid model of HET-s prion fibrils
-
Sen A, Baxa U, Simon MN, Wall JS, Sabate R, Saupe SJ, Steven AC, (2007) Mass analysis by scanning transmission electron microscopy and electron diffraction validate predictions of stacked beta-solenoid model of HET-s prion fibrils. J Biol Chem 282: 5545-5550
-
(2007)
J Biol Chem
, vol.282
, pp. 5545-5550
-
-
Sen, A.1
Baxa, U.2
Simon, M.N.3
Wall, J.S.4
Sabate, R.5
Saupe, S.J.6
Steven, A.C.7
-
57
-
-
0033624219
-
The 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: Some surprising results
-
Sieker LC, Holmes M, Le Trong I, Turley S, Liu MY, LeGall J, Stenkamp RE, (2000) The 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: some surprising results. J Biol Inorg Chem 5: 505-513
-
(2000)
J Biol Inorg Chem
, vol.5
, pp. 505-513
-
-
Sieker, L.C.1
Holmes, M.2
Le Trong, I.3
Turley, S.4
Liu, M.Y.5
Legall, J.6
Stenkamp, R.E.7
-
58
-
-
78650903518
-
A conformational switch involved in maturation of Staphylococcus aureus bacteriophage 80alpha capsids
-
Spilman MS, Dearborn AD, Chang JR, Damle PK, Christie GE, Dokland T, (2011) A conformational switch involved in maturation of Staphylococcus aureus bacteriophage 80alpha capsids. J Mol Biol 405: 863-876
-
(2011)
J Mol Biol
, vol.405
, pp. 863-876
-
-
Spilman, M.S.1
Dearborn, A.D.2
Chang, J.R.3
Damle, P.K.4
Christie, G.E.5
Dokland, T.6
-
59
-
-
17044440108
-
Virus maturation: Dynamics and mechanism of a stabilizing structural transition that leads to infectivity
-
Steven AC, Heymann JB, Cheng N, Trus BL, Conway JF, (2005) Virus maturation: dynamics and mechanism of a stabilizing structural transition that leads to infectivity. Curr Opin Struct Biol 15: 227-236
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 227-236
-
-
Steven, A.C.1
Heymann, J.B.2
Cheng, N.3
Trus, B.L.4
Conway, J.F.5
-
60
-
-
51349084876
-
Structural basis of enzyme encapsulation into a bacterial nanocompartment
-
Sutter M, Boehringer D, Gutmann S, Gunther S, Prangishvili D, Loessner MJ, Stetter KO, Weber-Ban E, Ban N, (2008) Structural basis of enzyme encapsulation into a bacterial nanocompartment. Nat Struct Mol Biol 15: 939-947
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 939-947
-
-
Sutter, M.1
Boehringer, D.2
Gutmann, S.3
Gunther, S.4
Prangishvili, D.5
Loessner, M.J.6
Stetter, K.O.7
Weber-Ban, E.8
Ban, N.9
-
61
-
-
79953309867
-
Ferritin protein nanocages use ion channels, catalytic sites, and nucleation channels to manage iron/oxygen chemistry
-
Theil EC, (2011) Ferritin protein nanocages use ion channels, catalytic sites, and nucleation channels to manage iron/oxygen chemistry. Curr Opin Chem Biol 15: 304-311
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 304-311
-
-
Theil, E.C.1
-
63
-
-
0028136474
-
Mass analysis of biological macromolecular complexes by STEM
-
Thomas D, Schultz P, Steven AC, Wall JS, (1994) Mass analysis of biological macromolecular complexes by STEM. Biol Cell 80: 181-192
-
(1994)
Biol Cell
, vol.80
, pp. 181-192
-
-
Thomas, D.1
Schultz, P.2
Steven, A.C.3
Wall, J.S.4
-
64
-
-
42949089487
-
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
-
Trabuco LG, Villa E, Mitra K, Frank J, Schulten K, (2008) Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structure 16: 673-683
-
(2008)
Structure
, vol.16
, pp. 673-683
-
-
Trabuco, L.G.1
Villa, E.2
Mitra, K.3
Frank, J.4
Schulten, K.5
-
65
-
-
0030475588
-
Positive-negative KG cassettes for construction of multi-gene deletions using a single drug marker
-
Ueki T, Inouye S, Inouye M, (1996) Positive-negative KG cassettes for construction of multi-gene deletions using a single drug marker. Gene 183: 153-157
-
(1996)
Gene
, vol.183
, pp. 153-157
-
-
Ueki, T.1
Inouye, S.2
Inouye, M.3
-
66
-
-
0028075093
-
Isolation and characterization of Linocin M18, a bacteriocin produced by Brevibacterium linens
-
Valdes-Stauber N, Scherer S, (1994) Isolation and characterization of Linocin M18, a bacteriocin produced by Brevibacterium linens. Appl Environ Microbiol 60: 3809-3814
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 3809-3814
-
-
Valdes-Stauber, N.1
Scherer, S.2
-
67
-
-
84863994272
-
Capsid structure and its stability at the late stages of bacteriophage SPP1 assembly
-
White HE, Sherman MB, Brasiles S, Jacquet E, Seavers P, Tavares P, Orlova EV, (2012) Capsid structure and its stability at the late stages of bacteriophage SPP1 assembly. J Virol 86: 6768-6777
-
(2012)
J Virol
, vol.86
, pp. 6768-6777
-
-
White, H.E.1
Sherman, M.B.2
Brasiles, S.3
Jacquet, E.4
Seavers, P.5
Tavares, P.6
Orlova, E.V.7
-
68
-
-
0034703226
-
Topologically linked protein rings in the bacteriophage HK97 capsid
-
Wikoff WR, Liljas L, Duda RL, Tsuruta H, Hendrix RW, Johnson JE, (2000) Topologically linked protein rings in the bacteriophage HK97 capsid. Science 289: 2129-2133
-
(2000)
Science
, vol.289
, pp. 2129-2133
-
-
Wikoff, W.R.1
Liljas, L.2
Duda, R.L.3
Tsuruta, H.4
Hendrix, R.W.5
Johnson, J.E.6
-
69
-
-
0017595257
-
Developmentally induced autolysis during fruiting body formation by Myxococcus xanthus
-
Wireman JW, Dworkin M, (1977) Developmentally induced autolysis during fruiting body formation by Myxococcus xanthus. J Bacteriol 129: 798-802
-
(1977)
J Bacteriol
, vol.129
, pp. 798-802
-
-
Wireman, J.W.1
Dworkin, M.2
-
70
-
-
0030947960
-
A mycobacterial extracytoplasmic function sigma factor involved in survival following stress
-
Wu QL, Kong D, Lam K, Husson RN, (1997) A mycobacterial extracytoplasmic function sigma factor involved in survival following stress. J Bacteriol 179: 2922-2929
-
(1997)
J Bacteriol
, vol.179
, pp. 2922-2929
-
-
Wu, Q.L.1
Kong, D.2
Lam, K.3
Husson, R.N.4
-
71
-
-
33845348934
-
Ab initio random model method facilitates 3D reconstruction of icosahedral particles
-
Yan X, Dryden KA, Tang J, Baker TS, (2007) Ab initio random model method facilitates 3D reconstruction of icosahedral particles. J Struct Biol 157: 211-225
-
(2007)
J Struct Biol
, vol.157
, pp. 211-225
-
-
Yan, X.1
Dryden, K.A.2
Tang, J.3
Baker, T.S.4
-
72
-
-
49649111573
-
Protein-based organelles in bacteria: Carboxysomes and related microcompartments
-
Yeates TO, Kerfeld CA, Heinhorst S, Cannon GC, Shively JM, (2008) Protein-based organelles in bacteria: carboxysomes and related microcompartments. Nat Rev Microbiol 6: 681-691
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 681-691
-
-
Yeates, T.O.1
Kerfeld, C.A.2
Heinhorst, S.3
Cannon, G.C.4
Shively, J.M.5
-
74
-
-
84864375724
-
Dps biomineralizing proteins: Multifunctional architects of nature
-
Zeth K, (2012) Dps biomineralizing proteins: multifunctional architects of nature. Biochem J 445: 297-311
-
(2012)
Biochem J
, vol.445
, pp. 297-311
-
-
Zeth, K.1
-
75
-
-
39449115394
-
I-TASSER server for protein 3D structure prediction
-
Zhang Y, (2008) I-TASSER server for protein 3D structure prediction. BMC Bioinformatics 9: 40
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 40
-
-
Zhang, Y.1
-
76
-
-
35348833523
-
Chemosensory pathways, motility and development in Myxococcus xanthus
-
Zusman DR, Scott AE, Yang Z, Kirby JR, (2007) Chemosensory pathways, motility and development in Myxococcus xanthus. Nat Rev Microbiol 5: 862-872
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 862-872
-
-
Zusman, D.R.1
Scott, A.E.2
Yang, Z.3
Kirby, J.R.4
|