Homomultimeric protease in the hyperthermophilic bacterium Thermotoga maritima has structural and amino acid sequence homology to bacteriocins in mesophilic bacteria

FEBS Letters

Volumn 440, Issue 3, 1998, Pages 393-398

  Hicks, Paula M ^a   Rinker, Kristina D ^a   Baker, Joey R ^a   Kelly, Robert M ^a  

^a North Carolina State University   (United States)

Author keywords

Bacteriocin; Proteolysis; Thermotoga

Indexed keywords

BACTERIOCIN; PROTEINASE;

AMINO ACID SEQUENCE; ARTICLE; ENZYME SPECIFICITY; GENE SEQUENCE; ISOELECTRIC FOCUSING; NONHUMAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; THERMOPHILIC BACTERIUM;

AMINO ACID SEQUENCE; BACTERIOCINS; ENDOPEPTIDASES; MICROSCOPY, ELECTRON; MOLECULAR SEQUENCE DATA; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY, AMINO ACID; THERMOTOGA MARITIMA;

BACTERIA (MICROORGANISMS); BREVIBACTERIUM LINENS; MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS; THERMOTOGA; THERMOTOGA MARITIMA;

EID: 0032438034     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(98)01451-3     Document Type: Article

References (53)

1. Kessel, M., Maurizi, M.R., Kim, B., Kocsis, E., Trus, B.L., Singh, S.K. and Steven, A.C. (1995) J. Mol. Biol. 250, 587-594.
2. Coward, C., Le Page, R.W.F. and Wells, J.M. (1995) Dev. Biol. Stand. 85, 481-486.
3. Maurizi, M.R., Clark, W.P., Katayama, Y., Rudikoff, S., Pumphrey, J., Bowers, B. and Gottesman, S. (1990) J. Biol. Chem. 265, 12536-12545.
4. Seol, J.H., Woo, K.M., Kang, M.S., Ha, D.B. and Chung, C.H. (1995) Biochem. Biophys. Res. Commun. 217, 41-51.
5. Bauer, M.W., Bauer, S.H. and Kelly, R.M. (1997) J. Bacteriol. 63, 1160-1164.
6. Bull, C.J. et al. (1996) Science 273, 1058-1073.
7. Dahlmann, B., Kuehn, L., Grziwa, A., Zwikl, P. and Baumeister, W. (1992) Eur. J. Biochem. 208, 789-797.
8. Maupin-Furlow, J.A. and Ferry, J.G. (1995) J. Biol. Chem. 270, 28617-28622.
9. Kessel, M., Wu, W.-f., Gottesman, S., Kocsis, E., Steven, A.C. and Maurizi, M.R. (1996) FEBS Lett. 398, 274-278.
10. Rohrwild, M., Coux, O., Huang, H.-C., Moerschell, R.P., Yoo, S.J., Seol, J.H., Chung, C.H. and Goldberg, A.L. (1996) Proc. Natl. Acad. Sci. USA 93, 5808-5813.
11. Rohrwild, M., Pfeifer, G., Santarius, U., Muller, S.A., Huang, H.-C., Engel, A., Baumeister, W. and Goldberg, A.L. (1997) Nature Struct. Biol. 4, 133-139.
12. Zuhl, F., Tamura, T., Dolenc, I., Cejka, Z., Nagy, I., Mot, R.D. and Baumeister, W. (1997) FEBS Lett. 400, 83-90.
13. Hoffman, L. and Rechsteiner, M. (1994) J. Biol. Chem. 269, 16890-16895.
14. Mykles, D.L. (1996) Arch. Biochem. Biophys. 325, 77-81.
15. Pereira, M.E., Yu, B. and Wilk, S. (1992) Arch. Biochem. Biophys. 294, 1-8.
16. Shibatani, T. and Ward, W.F. (1995) Arch. Biochem. Biophys. 321, 160-166.
17. Olsen, G.J., Woese, C.R. and Overbeek, R. (1994) J. Bacteriol. 176, 1-6.
18. Woese, C.R. (1987) Microbiol. Rev. 51, 221-271.
19. Klenk, H.P. et al. (1997) Nature 390, 364-370.
20. Halio, S.B., Bauer, M.W., Mukund, S., Adams, M.W.W, and Kelly, R.M. (1997) Appl. Environ. Microbiol. 63, 289-295.
21. Tamura, T., Tamura, N., Cejka, Z., Hegerl, R., Lottspeich, F. and Baumeister, W. (1996) Science 274, 1385-1389.
22. Huber, R., Langworthy, T.A., Konig, H., Thomm, M., Woese, C.R., Sleytr, U.B. and Stetter, K.O. (1986) Arch. Microbiol. 144, 324-333.
23. Huber, R. et al. (1992) Syst. Appl. Microbiol. 15, 340-351.
24. Deckert, G. et al. (1998) Nature 392, 353-358.
25. Valdes-Stauber, N. and Scherer, S. (1994) Appl. Environ. Microbiol. 60, 3809-3814.
26. Valdes-Stauber, N. and Scherer, S. (1996) Appl. Environ. Microbiol. 62, 1283-1286.
27. Rinker, K.D. and Kelly, R.M. (1996) Appl. Environ. Microbiol. 62, 4478-4485.
28. Matheson, A.T. and Tattrie, B.L. (1964) Can. J. Biochem. 42, 95-103.
29. White, C.A. and Kennedy, J.F. (1986) in: Carbohydrate Analysis: A Practical Approach (Chaplin, M.F. and Kennedy, J.F., Eds.), p. 38, IRL Press, Oxford.
30. Sambrook, J., Fritsch, E. and Maniatis, T. (1989) Molecular cloning: A Laboratory Manual, 2nd edn., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
31. Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) J. Mol. Biol. 215, 403-410.
32. Genetics Computer Group (1994) Program Manual for the Wisconsin Package, Version 8, Madison, WI.
33. Dykstra, M.J. (1993) p. 257, Plenum Press, New York.
34. TIGR (The Institute for Genomic Research) (1998) Partial sequence of Thermotoga maritima, accessible online at ftp://ftp.tigr .org/pub/data/t_maritima/
35. ExPASy ProtParam Tool (1996) Online edn., Geneva University Hospital and University of Geneva.
36. Pfister, H. and Lodderstaedt, G. (1977) J. Gen. Virol. 37, 337-347.
37. Konig, H. (1989) in: Microbiology of Extreme Environments and its Potential for Biotechnology (Costa, M.S.D., Duarte, J.C. and Williams, R.A.D., Eds.), pp. 117-130, Elsevier Applied Science, London.
38. Johnston, S.L. (1997) Trends Microbiol. 5, 58-63.
39. Silva, A.M., Cachau, R.E., Sham, H.L. and Erickson, J.W. (1996) J. Mol. Biol. 255, 321-346.
40. Seimiya, H., Mashima, T., Toho, M. and Tsuruo, T. (1997) J. Biol. Chem. 272, 4631-4636.
41. Tedone, T., Correale, M., Barbarossa, G., Casavola, V., Paradiso, A. and Reshkin, S.J. (1997) FASEB J. 11, 785-792.
42. Bednarski, E., Vanderklish, P., Gall, C., Saido, T.C., Bahr, B.A. and Lynch, G. (1995) Brain Res. 694, 147-157.
43. Inui, T., Ishibashi, O., Inaoka, T., Origane, Y., Kumegawa, M., Kokubo, T. and Yamamura, T. (1997) J. Biol. Chem. 272, 8109-8112.
44. Chuang, S.-E. and Blattner, F.R. (1993) J. Bacteriol. 175, 5242-5252.
45. Harcum, S.W. and Bentley, W.E. (1993) Biotechnol. Bioeng. 42, 675-685.
46. Maurizi, M. (1992) Experientia 48, 178-201.
47. Neidhardt, F. and Vanbogelen, R. (1987) in: Escherichia coli and Salmonella typhimurium, Cellular and Molecular Biology (Neidhardt, F., Ed.), Vol. 2, pp. 1334-1345, American Society for Microbiology, Washington, DC.
48. Read, M.A., Neish, A.S., Luscinskas, F.W., Palombella, V.J., Maniatis, T. and Collins, T. (1995) Immunity 2, 493-506.
49. Boucabeille, C., Mengin-Lecreulx, D., Hanckes, G., Simonet, J.M. and van Heijenoort, J. (1997) FEMS Mirobiol. Lett. 153, 295-301.
50. Kuroda, K. and Kagiyama, R. (1983) J. Biochem. 94, 1429-1441.
51. Aagaard, C., Leviev, I., Aravalli, R.N., Forterre, P., Prieur, D. and Garrett, R.A. (1996) FEMS Microbiol. Rev. 18, 93-104.
52. Makawi, A.A. (1980) Zentralbl. Bakteriol. [Naturwissensch.] 135, 12-21.
53. Ward, D.J. and Somkuti, G.A. (1995) Appl. Microbiol. Biotechnol. 43, 330-335.