Lack of association between miR-27a, miR-146a, miR-196a-2, miR-492 and miR-608 gene polymorphisms and colorectal cancer

Scientific Reports

Volumn 4, Issue , 2014, Pages

  Kupcinskas, Juozas ^a   Bruzaite, Indre ^a   Juzenas, Simonas ^a   Gyvyte, Ugne ^a   Jonaitis, Laimas ^a   Kiudelis, Gediminas ^a   Skieceviciene, Jurgita ^a   Leja, Marcis ^b   Pauzas, Henrikas ^a   Tamelis, Algimantas ^a   Pavalkis, Dainius ^a   Kupcinskas, Limas ^a  

^a LITHUANIAN UNIVERSITY OF HEALTH SCIENCES   (Lithuania)

^b UNIVERSITY OF LATVIA   (Latvia)

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA;

AGED; ALLELE; CASE CONTROL STUDY; CAUCASIAN; COLORECTAL TUMOR; FEMALE; GENE FREQUENCY; GENETICS; GENOTYPE; HUMAN; MALE; METABOLISM; MIDDLE AGED; RISK; RISK FACTOR; SINGLE NUCLEOTIDE POLYMORPHISM;

AGED; ALLELES; CASE-CONTROL STUDIES; COLORECTAL NEOPLASMS; EUROPEAN CONTINENTAL ANCESTRY GROUP; FEMALE; GENE FREQUENCY; GENOTYPE; HUMANS; MALE; MICRORNAS; MIDDLE AGED; ODDS RATIO; POLYMORPHISM, SINGLE NUCLEOTIDE; RISK FACTORS;

EID: 84905833880     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep05993     Document Type: Article

References (48)

1. Jemal, A., Bray, F., Center, M. M., Ferlay, J., Ward, E. & Forman, D. Global cancer statistics. CA Cancer J Clin 61, 69-90 (2011).
2. Siegel, R., Naishadham, D.&Jemal, A. Cancer statistics, 2012. CA Cancer J Clin 62, 10-29 (2012).
3. Ferrari, P. et al. Lifetime and baseline alcohol intake and risk of colon and rectal cancer in the European prospective investigation into cancer and nutrition (EPIC). Int J Cancer 121, 2065-2072 (2007). (Pubitemid 47463172)
4. Jemal, A., Siegel, R., Xu, J. &Ward, E. Cancer statistics, 2010. CA Cancer J Clin 60, 277-300 (2010).
5. Corte, H., Manceau, G., Blons, H. & Laurent-Puig, P. MicroRNA and colorectal cancer. Dig Liver Dis 44, 195-200 (2012).
6. Peters, U. et al. Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis. Gastroenterology 144, 799-807 (2012).
7. Greenman, C. et al. Patterns of somatic mutation in human cancer genome. Nature 446, 153-158 (2007). (Pubitemid 46398669)
8. Dunlop, C. et al. Common variation near CDKN1A, POLD3 and SHROOM2 influence colorectal cancer risk. Nat Genet 44, 770-6 (2012).
9. Srivastava, K. & Srivastava, A. Comprehensive review of genetic association studies and meta-analyses on miRNA polymorphisms and cancer risk. PLoS One 7, e50966 (2012).
10. Lee, R. C., Feinbaum, R. L. & Ambros, V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75, 843-54 (1993). (Pubitemid 24014542)
11. Wightman, B., Ha, I. & Ruvkun, G. Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell 75, 855-862 (1993). (Pubitemid 24014543)
12. Calin, G. A. & Croce, C. M. MicroRNA signatures in human cancers. Nat Rev Cancer 6, 857-866 (2006). (Pubitemid 44629897)
13. Nugent, M., Miller, N. & Kerin, M. J. MicroRNAs in colorectal cancer: function, dysregulation and potential as novel biomarkers. Eur J Surg Oncol 37, 649-654 (2011).
14. Li, M., Marin-Muller, C., Bharadway, U., Chow, K. H., Yao, Q. & Chen, C. MicroRNAs: control and loss of control in human physiology and disease. World J Surg 33, 667-684 (2009).
15. Ye, J. J. & Cao, J. et al. MicroRNAs in colorectal cancer as markers and targets: Recent advances. World J Gastroenterol 20, 4288-4299 (2014).
16. Mishra, P. J. & Bertino, J. R. MicroRNA polymorphisms: the future of pharmacogenomics, molecular epidemiology and individualized medicine. Pharmacogenomics 10, 399-416 (2009).
17. Ryan, B. M., Robles, A. I.&Harris, C. C. Genetic variation in microRNA networks: the implications for cancer research. Nat Rev Cancer 10, 389-402 (2010).
18. Link, A., Kupcinskas, J., Wex, T. &Malfertheiner, P. Macro-role of microRNA in gastric cancer. Dig Dis 30, 255-267 (2012).
19. Jazdzewski, K., Murray, E. L., Franssila, K., Jarzab, B., Schoenberg, D. R. & de la Chapelle, A. Common SNP in pre-miR-146a decreases mature miR expression and predisposes to papillary thyroid carcinoma. Proc Natl Acad Sci U S A 105, 7269-7274 (2008). (Pubitemid 351754467)
20. Yang, Q. et al. Genetic variations in miR-27a gene decrease mature miR-27a level and reduce gastric cancer susceptibility. Oncogene 33, 193-202 (2012).
21. Song, M. Y. et al. Genetic polymorphisms of miR-146a and miR-27a, H. pylori infection, and risk of gastric lesions in a Chinese population. PloS One 8, e61250 (2013).
22. Lee, H. C. et al. Prognostic impact of microRNA-related gene polymorphisms on survival of patients with colorectal cancer. J Cancer Res Clin Oncol 136, 1073-1078 (2010).
23. Huang, A. J., Yu, K. D., Li, J., Fan, L.&Shao, Z. M. Polymorphism rs4919510:C.G in mature sequence of human microRNA-608 contributes to the risk of HER2- positive breast cancer but not other subtypes. PloS One 7, e35252 (2012).
24. Hu, Y., Yu, C. Y., Wang, J. L., Guan, J., Chen, H. Y. & Fang, J. Y. MicroRNA sequence polymorphisms and the risk of different types of cancer. Sci Rep 4, 3648 (2014).
25. Tian, T., Xu, Y., Dai, J., Wu, J., Shen, H. & Hu, Z. Functional polymorphisms in two pre-microRNAs and cancer risk: ameta-analysis. Int JMol Epidemiol Genet 1, 358-366 (2010).
26. Lv, M. et al. Association between genetic variants in pre-miRNA and colorectal cancer risk in a Chinese population. J Cancer Res Clin Oncol 139, 1405-1410 (2013).
27. Min, K. T. et al. Association of the miR-146aC>G, 149C>T, 196a2C>T, and 499A>G polymorphisms with colorectal cancer in the Korean population. Mol Carcinog 51, E65-73 (2012).
28. Zhu, L. et al. A functional poly'morphism in miRNA-196a2 is associated with colorectal cancer risk in a Chinese population. DNA Cell Biol 31, 350-354 (2012).
29. Zhan, J. et al. A functional variant in microRNA-196a2 is associated with susceptibility of colorectal cancer in a Chinese population. Arch Med Res 42, 144-148 (2011).
30. Chen, H., Sun, L. Y., Chen, L. L., Zheng, H. Q. & Zhang, Q. F. A variant in microRNA-196a2 is not associated with susceptibility to and progression of colorectal cancer in Chinese. Intern Med J 42, 115-119 (2012).
31. Hezova, R. et al. Evaluation of SNPs in miR-196-a2, miR-27a and miR-146a as risk factors of colorectal cancer. World J Gastroenterol 18, 2827-2831 (2012).
32. Vinci, S. et al. Genetic and epigenetic factors in regulation of microRNA in colorectal cancers. Methods 59, 138-46 (2013).
33. Xu, T. et al. A functional polymorphism in the miR-146a gene is associated with the risk for hepatocellular carcinoma. Carcinogenesis 29, 2126-31 (2008).
34. Li, L., Chen, X. P.&Li, Y. J. MicroRNA-146a and human disease. Scand J Immunol 71, 227-231 (2010).
35. Ma, L. et al. Agenetic variant in miR-146a modifies colorectal cancer susceptibility in a Chinese population. Arch Toxicol 87, 825-33 (2013).
36. Hu, X. et al. Association between microRNA genetic variants and susceptibility to colorectal cancer in Chinese population. Tumour Biol 35, 2151-56 (2014).
37. Parlayan, C., Ikeda, S., Sato, N., Sawabe, M., Murmatsu, M. & Arai, T. Association analysis of single nucleotide polymorphisms in miR-146a and miR-196a2 on the prevalence of cancer in elderly Japanese: a case-control study. Asian Pac J Cancer Prev 15, 2101-07 (2014).
38. Pathi, S. S. et al. GT-094, a NO-NSAID, inhibits colon cancer cell growth by activation of a reactive oxygen species-microRNA-27a: ZBTB10-specificity protein pathway. Mol Cancer Res 9, 195-202 (2011).
39. Gaedcke, J. et al. The rectal cancer microRNAome - microRNA expression in rectal cancer and matched normal mucosa. Clin Cancer Res 18, 4919-4930 (2012).
40. Lin, M. et al. Genetic polymorphisms in microRNA-related genes as predictors of clinical outcomes in colorectal adenocarcinoma patients. Clin Cancer Res 18, 3982-3991 (2012).
41. Xing, J. et al. Genetic polymorphisms in pre-microRNA genes as prognostic markers of colorectal cancer. Cancer Epidemiol Biomarkers Prev 21, 217-227 (2012).
42. Ryan, B. M. et al. Rs4919510 in hsa-mir-608 is associated with outcome but not risk of colorectal cancer. PLoS One 7, e36306 (2012).
43. Wan, D. et al. Effects of common polymorphisms rs2910164 in miR-146a and rs11614913 in miR-196a2 on susceptibility to colorectal cancer: a systematic review meta-analysis. Clin Transl Oncol [Epub ahead of print] (2014).
44. Yoon, K. A. et al. The prognostic impact of microRNA sequence polymorphisms. J Thorac Cardiovasc Surgery 144, 794-807 (2012).
45. Kupcinskas, J. et al. Gene polymorphisms of microRNAs in Helicobacter pylori-induced high risk atrophic gastritis and gastric cancer. PLoS One 9, e87467 (2014).
46. Xu, W. et al. Effects of common polymorphisms rs11614913 in miR-196a2 and rs2910164 in miR-146a on cancer susceptibility: a meta-analysis. PLoS One 6, e20471 (2011).
47. Welter, D. et al. The NHGRI GWAS Catalog, a curated resource of SNP-trait associations. Nucleic Acids Research 42, database issue (2014).
48. Purcell, S. et al. PLINK: a toolset for whole-genome association and populationbased linkage analyses. Am J Hum Genet 81, 559-575 (2007). (Pubitemid 47330214)