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Volumn 18, Issue 18, 2012, Pages 4919-4930

The rectal cancer microRNAome - MicroRNA expression in rectal cancer and matched normal mucosa

Author keywords

[No Author keywords available]

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR; FLUOROURACIL; FOLINIC ACID; INSULIN; MAMMALIAN TARGET OF RAPAMYCIN; MICRORNA; MICRORNA 135B; MICRORNA 144; MICRORNA 147B; MICRORNA 148A; MICRORNA 190; MICRORNA 2110; MICRORNA 26A; MICRORNA 26B; MICRORNA 338 3P; MICRORNA 375; MICRORNA 483 5P; MICRORNA 492; MICRORNA 542 5P; MICRORNA 584; MICRORNA 652; MITOGEN ACTIVATED PROTEIN KINASE; OXALIPLATIN; TRANSFORMING GROWTH FACTOR BETA; UNCLASSIFIED DRUG; WNT PROTEIN;

EID: 84866364068     PISSN: 10780432     EISSN: 15573265     Source Type: Journal    
DOI: 10.1158/1078-0432.CCR-12-0016     Document Type: Article
Times cited : (169)

References (50)
  • 1
    • 80051580618 scopus 로고    scopus 로고
    • Cancer statistics, 2011: The impact of eliminating socioeconomic and racial disparities on premature cancer deaths
    • Siegel R, Ward E, Brawley O, Jemal A. Cancer statistics, 2011: the impact of eliminating socioeconomic and racial disparities on premature cancer deaths. CA Cancer J Clin 2011;61:212-36.
    • (2011) CA Cancer J Clin , vol.61 , pp. 212-236
    • Siegel, R.1    Ward, E.2    Brawley, O.3    Jemal, A.4
  • 4
    • 33846455463 scopus 로고    scopus 로고
    • Gene expression profiling reveals a massive, aneuploidy-dependent transcriptional deregulation and distinct differences between lymph node-negative and lymph node-positive colon carcinomas
    • Grade M, Hormann P, Becker S, Hummon AB, Wangsa D, Varma S, et al. Gene expression profiling reveals a massive, aneuploidy-dependent transcriptional deregulation and distinct differences between lymph node-negative and lymph node-positive colon carcinomas. Cancer Res 2007;67:41-56.
    • (2007) Cancer Res , vol.67 , pp. 41-56
    • Grade, M.1    Hormann, P.2    Becker, S.3    Hummon, A.B.4    Wangsa, D.5    Varma, S.6
  • 6
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc Series B 1995;57:289-300.
    • (1995) J R Stat Soc Series B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 8
    • 77957907885 scopus 로고    scopus 로고
    • Mutated KRAS results in overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas
    • Gaedcke J, Grade M, Jung K, Camps J, Jo P, Emons G, et al. Mutated KRAS results in overexpression of DUSP4, a MAP-kinase phosphatase, and SMYD3, a histone methyltransferase, in rectal carcinomas. Genes Chromosomes Cancer 2010;49:1024-34.
    • (2010) Genes Chromosomes Cancer , vol.49 , pp. 1024-1034
    • Gaedcke, J.1    Grade, M.2    Jung, K.3    Camps, J.4    Jo, P.5    Emons, G.6
  • 9
    • 80051551736 scopus 로고    scopus 로고
    • Reference genes for the relative quantification of microRNAs in renal cell carcinomas and their metastases
    • Wotschofsky Z, Meyer HA, Jung M, Fendler A, Wagner I, Stephan C, et al. Reference genes for the relative quantification of microRNAs in renal cell carcinomas and their metastases. Anal Biochem; 417:233-41.
    • Anal Biochem , vol.417 , pp. 233-241
    • Wotschofsky, Z.1    Meyer, H.A.2    Jung, M.3    Fendler, A.4    Wagner, I.5    Stephan, C.6
  • 10
    • 77951587943 scopus 로고    scopus 로고
    • MicroRNA expression profiling to identify and validate reference genes for relative quantification in colorectal cancer
    • Chang KH, Mestdagh P, Vandesompele J, Kerin MJ, Miller N. MicroRNA expression profiling to identify and validate reference genes for relative quantification in colorectal cancer. BMC Cancer 2010;10:173.
    • (2010) BMC Cancer , vol.10 , pp. 173
    • Chang, K.H.1    Mestdagh, P.2    Vandesompele, J.3    Kerin, M.J.4    Miller, N.5
  • 11
    • 79953207276 scopus 로고    scopus 로고
    • The small-nucleolar RNAs commonly used for microRNA normalisation correlate with tumour pathology and prognosis
    • Gee HE, Buffa FM, Camps C, Ramachandran A, Leek R, Taylor M, et al. The small-nucleolar RNAs commonly used for microRNA normalisation correlate with tumour pathology and prognosis. Br J Cancer; 104:1168-77.
    • Br J Cancer , vol.104 , pp. 1168-1177
    • Gee, H.E.1    Buffa, F.M.2    Camps, C.3    Ramachandran, A.4    Leek, R.5    Taylor, M.6
  • 13
    • 63949085870 scopus 로고    scopus 로고
    • The impact of microRNAs on colorectal cancer
    • Faber C, Kirchner T, Hlubek F. The impact of microRNAs on colorectal cancer. Virchows Arch 2009;454:359-67.
    • (2009) Virchows Arch , vol.454 , pp. 359-367
    • Faber, C.1    Kirchner, T.2    Hlubek, F.3
  • 14
    • 34548668636 scopus 로고    scopus 로고
    • miChip: A microarray platform for expression profiling of microRNAs based on locked nucleic acid (LNA) oligonucleotide capture probes
    • Castoldi M, Benes V, Hentze MW, Muckenthaler MU. miChip: a microarray platform for expression profiling of microRNAs based on locked nucleic acid (LNA) oligonucleotide capture probes. Methods 2007;43:146-52.
    • (2007) Methods , vol.43 , pp. 146-152
    • Castoldi, M.1    Benes, V.2    Hentze, M.W.3    Muckenthaler, M.U.4
  • 15
    • 68149116016 scopus 로고    scopus 로고
    • Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing
    • Nygaard S, Jacobsen A, Lindow M, Eriksen J, Balslev E, Flyger H, et al. Identification and analysis of miRNAs in human breast cancer and teratoma samples using deep sequencing. BMC Med Genomics 2009;2:35.
    • (2009) BMC Med Genomics , vol.2 , pp. 35
    • Nygaard, S.1    Jacobsen, A.2    Lindow, M.3    Eriksen, J.4    Balslev, E.5    Flyger, H.6
  • 18
    • 48649099908 scopus 로고    scopus 로고
    • Regulation of the adenomatous polyposis coli gene by the miR-135 family in colorectal cancer
    • Nagel R, le Sage C, Diosdado B, van der Waal M, Oude Vrielink JA, Bolijn A, et al. Regulation of the adenomatous polyposis coli gene by the miR-135 family in colorectal cancer. Cancer Res 2008;68:5795-802.
    • (2008) Cancer Res , vol.68 , pp. 5795-5802
    • Nagel, R.1    Le Sage, C.2    Diosdado, B.3    Van Der Waal, M.4    Oude Vrielink, J.A.5    Bolijn, A.6
  • 19
    • 71049136170 scopus 로고    scopus 로고
    • MicroRNAs in colorectal cancer: Translation of molecular biology into clinical application
    • Slaby O, Svoboda M, Michalek J, Vyzula R. MicroRNAs in colorectal cancer: translation of molecular biology into clinical application. Mol Cancer 2009;8:102.
    • (2009) Mol Cancer , vol.8 , pp. 102
    • Slaby, O.1    Svoboda, M.2    Michalek, J.3    Vyzula, R.4
  • 20
    • 33747628074 scopus 로고    scopus 로고
    • Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues
    • Bandres E, Cubedo E, Agirre X, Malumbres R, Zarate R, Ramirez N, et al. Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues. Mol Cancer 2006;5:29.
    • (2006) Mol Cancer , vol.5 , pp. 29
    • Bandres, E.1    Cubedo, E.2    Agirre, X.3    Malumbres, R.4    Zarate, R.5    Ramirez, N.6
  • 21
    • 35748967324 scopus 로고    scopus 로고
    • mRNA/microRNA gene expression profile in microsatellite unstable colorectal cancer
    • Lanza G, Ferracin M, Gafa R, Veronese A, Spizzo R, Pichiorri F, et al. mRNA/microRNA gene expression profile in microsatellite unstable colorectal cancer. Mol Cancer 2007;6:54.
    • (2007) Mol Cancer , vol.6 , pp. 54
    • Lanza, G.1    Ferracin, M.2    Gafa, R.3    Veronese, A.4    Spizzo, R.5    Pichiorri, F.6
  • 23
    • 38749089854 scopus 로고    scopus 로고
    • MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma
    • Schetter AJ, Leung SY, Sohn JJ, Zanetti KA, Bowman ED, Yanaihara N, et al. MicroRNA expression profiles associated with prognosis and therapeutic outcome in colon adenocarcinoma. JAMA 2008;299:425-36.
    • (2008) JAMA , vol.299 , pp. 425-436
    • Schetter, A.J.1    Leung, S.Y.2    Sohn, J.J.3    Zanetti, K.A.4    Bowman, E.D.5    Yanaihara, N.6
  • 24
    • 71549125896 scopus 로고    scopus 로고
    • Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states
    • Sarver AL, French AJ, Borralho PM, Thayanithy V, Oberg AL, Silverstein KA, et al. Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states. BMC Cancer 2009;9:401.
    • (2009) BMC Cancer , vol.9 , pp. 401
    • Sarver, A.L.1    French, A.J.2    Borralho, P.M.3    Thayanithy, V.4    Oberg, A.L.5    Silverstein, K.A.6
  • 26
    • 77954368612 scopus 로고    scopus 로고
    • Association of microRNA expression with microsatellite instability status in colorectal adenocarcinoma
    • Earle JS, Luthra R, Romans A, Abraham R, Ensor J, Yao H, et al. Association of microRNA expression with microsatellite instability status in colorectal adenocarcinoma. J Mol Diagn 2010;12:433-40.
    • (2010) J Mol Diagn , vol.12 , pp. 433-440
    • Earle, J.S.1    Luthra, R.2    Romans, A.3    Abraham, R.4    Ensor, J.5    Yao, H.6
  • 27
    • 77950881915 scopus 로고    scopus 로고
    • Oncofetal H19-derived miR-675 regulates tumor suppressor RB in human colorectal cancer
    • Tsang WP, Ng EK, Ng SS, Jin H, Yu J, Sung JJ, et al. Oncofetal H19-derived miR-675 regulates tumor suppressor RB in human colorectal cancer. Carcinogenesis 2010;31:350-8.
    • (2010) Carcinogenesis , vol.31 , pp. 350-358
    • Tsang, W.P.1    Ng, E.K.2    Ng, S.S.3    Jin, H.4    Yu, J.5    Sung, J.J.6
  • 28
    • 40449141527 scopus 로고    scopus 로고
    • Chromosomal breakpoints in primary colon cancer cluster at sites of structural variants in the genome
    • Camps J, Grade M, Nguyen QT, Hormann P, Becker S, Hummon AB, et al. Chromosomal breakpoints in primary colon cancer cluster at sites of structural variants in the genome. Cancer Res 2008;68:1284-95.
    • (2008) Cancer Res , vol.68 , pp. 1284-1295
    • Camps, J.1    Grade, M.2    Nguyen, Q.T.3    Hormann, P.4    Becker, S.5    Hummon, A.B.6
  • 29
    • 33644919969 scopus 로고    scopus 로고
    • Primate microRNAs miR-220 and miR-492 lie within processed pseudogenes
    • Devor EJ. Primate microRNAs miR-220 and miR-492 lie within processed pseudogenes. J Hered 2006;97:186-90.
    • (2006) J Hered , vol.97 , pp. 186-190
    • Devor, E.J.1
  • 30
    • 79952212867 scopus 로고    scopus 로고
    • MicroRNA-492 is processed from the keratin 19 gene and up-regulated in metastatic hepatoblastoma
    • von Frowein J, Pagel P, Kappler R, von Schweinitz D, Roscher A, Schmid I. MicroRNA-492 is processed from the keratin 19 gene and up-regulated in metastatic hepatoblastoma. Hepatology 2011;53:833-42.
    • (2011) Hepatology , vol.53 , pp. 833-842
    • Von Frowein, J.1    Pagel, P.2    Kappler, R.3    Von Schweinitz, D.4    Roscher, A.5    Schmid, I.6
  • 31
    • 79955439408 scopus 로고    scopus 로고
    • Traces of post-transcriptional RNA modifications in deep sequencing data
    • Findeiss S, Langenberger D, Stadler PF, Hoffmann S. Traces of post-transcriptional RNA modifications in deep sequencing data. Biol Chem 2011;392:305-13.
    • (2011) Biol Chem , vol.392 , pp. 305-313
    • Findeiss, S.1    Langenberger, D.2    Stadler, P.F.3    Hoffmann, S.4
  • 32
    • 75549084786 scopus 로고    scopus 로고
    • DeepBase: A database for deeply annotating and mining deep sequencing data
    • Yang JH, Shao P, Zhou H, Chen YQ, Qu LH. deepBase: a database for deeply annotating and mining deep sequencing data. Nucleic Acids Res 2010;38:D123-30.
    • (2010) Nucleic Acids Res , vol.38
    • Yang, J.H.1    Shao, P.2    Zhou, H.3    Chen, Y.Q.4    Qu, L.H.5
  • 33
    • 60549115605 scopus 로고    scopus 로고
    • Post-transcriptional processing generates a diversity of 5′-modified long and short RNAs
    • Fejes-Toth K, Sotirova V, Sachidanandam R, Assaf G, Hannon GJ, Kapranov P, et al. Post-transcriptional processing generates a diversity of 5′-modified long and short RNAs. Nature 2009;457:1028-32.
    • (2009) Nature , vol.457 , pp. 1028-1032
    • Fejes-Toth, K.1    Sotirova, V.2    Sachidanandam, R.3    Assaf, G.4    Hannon, G.J.5    Kapranov, P.6
  • 34
    • 79953767181 scopus 로고    scopus 로고
    • MicroRNA profiling of adrenocortical tumors reveals miR-483 as a marker of malignancy
    • Patterson EE, Holloway AK, Weng J, Fojo T, Kebebew E. MicroRNA profiling of adrenocortical tumors reveals miR-483 as a marker of malignancy. Cancer. 2011.
    • (2011) Cancer
    • Patterson, E.E.1    Holloway, A.K.2    Weng, J.3    Fojo, T.4    Kebebew, E.5
  • 36
    • 78751581958 scopus 로고    scopus 로고
    • Tumour suppressor microRNA-584 directly targets oncogene Rock-1 and decreases invasion ability in human clear cell renal cell carcinoma
    • Ueno K, Hirata H, Shahryari V, Chen Y, Zaman MS, Singh K, et al. Tumour suppressor microRNA-584 directly targets oncogene Rock-1 and decreases invasion ability in human clear cell renal cell carcinoma. Br J Cancer 2011;104:308-15.
    • (2011) Br J Cancer , vol.104 , pp. 308-315
    • Ueno, K.1    Hirata, H.2    Shahryari, V.3    Chen, Y.4    Zaman, M.S.5    Singh, K.6
  • 37
    • 79960916106 scopus 로고    scopus 로고
    • Human tumor MicroRNA signatures derived from large-scale oligonucleotide microarray datasets
    • Wang W, Peng B, Wang D, Ma X, Jiang D, Zhao J, et al. Human tumor MicroRNA signatures derived from large-scale oligonucleotide microarray datasets. Int J Cancer. 2011;129:1624-34.
    • (2011) Int J Cancer , vol.129 , pp. 1624-1634
    • Wang, W.1    Peng, B.2    Wang, D.3    Ma, X.4    Jiang, D.5    Zhao, J.6
  • 38
    • 63149105412 scopus 로고    scopus 로고
    • Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas
    • Zhu JY, Pfuhl T, Motsch N, Barth S, Nicholls J, Grasser F, et al. Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas. J Virol 2009;83:3333-41.
    • (2009) J Virol , vol.83 , pp. 3333-3341
    • Zhu, J.Y.1    Pfuhl, T.2    Motsch, N.3    Barth, S.4    Nicholls, J.5    Grasser, F.6
  • 40
    • 76349114730 scopus 로고    scopus 로고
    • Initial study of microRNA expression profiles of colonic cancer without lymph node metastasis
    • Wang YX, Zhang XY, Zhang BF, Yang CQ, Chen XM, Gao HJ. Initial study of microRNA expression profiles of colonic cancer without lymph node metastasis. J Dig Dis 2010;11:50-4.
    • (2010) J Dig Dis , vol.11 , pp. 50-54
    • Wang, Y.X.1    Zhang, X.Y.2    Zhang, B.F.3    Yang, C.Q.4    Chen, X.M.5    Gao, H.J.6
  • 41
    • 77956790226 scopus 로고    scopus 로고
    • MicroRNA-195 promotes apoptosis and suppresses tumorigenicity of human colorectal cancer cells
    • Liu L, Chen L, Xu Y, Li R, Du X. microRNA-195 promotes apoptosis and suppresses tumorigenicity of human colorectal cancer cells. Biochem Biophys Res Commun 2010;400:236-40.
    • (2010) Biochem Biophys Res Commun , vol.400 , pp. 236-240
    • Liu, L.1    Chen, L.2    Xu, Y.3    Li, R.4    Du, X.5
  • 42
    • 80053987030 scopus 로고    scopus 로고
    • MiR-148a promotes apoptosis by targeting Bcl-2 in colorectal cancer
    • Zhang H, Li Y, Huang Q, Ren X, Hu H, Sheng H, et al. MiR-148a promotes apoptosis by targeting Bcl-2 in colorectal cancer. Cell Death Differ. 2011;18:1702-10.
    • (2011) Cell Death Differ , vol.18 , pp. 1702-1710
    • Zhang, H.1    Li, Y.2    Huang, Q.3    Ren, X.4    Hu, H.5    Sheng, H.6
  • 43
    • 62549109089 scopus 로고    scopus 로고
    • Profiling of 95 microRNAs in pancreatic cancer cell lines and surgical specimens by real-time PCR analysis
    • Zhang Y, Li M, Wang H, Fisher WE, Lin PH, Yao Q, et al. Profiling of 95 microRNAs in pancreatic cancer cell lines and surgical specimens by real-time PCR analysis. World J Surg 2009;33:698-709.
    • (2009) World J Surg , vol.33 , pp. 698-709
    • Zhang, Y.1    Li, M.2    Wang, H.3    Fisher, W.E.4    Lin, P.H.5    Yao, Q.6
  • 45
    • 78651411120 scopus 로고    scopus 로고
    • MiR-26a inhibits cell growth and tumorigenesis of nasopharyngeal carcinoma through repression of EZH2
    • Lu J, He ML, Wang L, Chen Y, Liu X, Dong Q, et al. MiR-26a inhibits cell growth and tumorigenesis of nasopharyngeal carcinoma through repression of EZH2. Cancer Res 2011;71:225-33.
    • (2011) Cancer Res , vol.71 , pp. 225-233
    • Lu, J.1    He, M.L.2    Wang, L.3    Chen, Y.4    Liu, X.5    Dong, Q.6
  • 46
    • 79952118835 scopus 로고    scopus 로고
    • Pathologically decreased miR-26a antagonizes apoptosis and facilitates carcinogenesis by targeting MTDH and EZH2 in breast cancer
    • Zhang B, Liu XX, He JR, Zhou CX, Guo M, He M, et al. Pathologically decreased miR-26a antagonizes apoptosis and facilitates carcinogenesis by targeting MTDH and EZH2 in breast cancer. Carcinogenesis 2011;32:2-9.
    • (2011) Carcinogenesis , vol.32 , pp. 2-9
    • Zhang, B.1    Liu, X.X.2    He, J.R.3    Zhou, C.X.4    Guo, M.5    He, M.6
  • 47
    • 66249106716 scopus 로고    scopus 로고
    • Predicting microRNA targets and functions: Traps for the unwary
    • Ritchie W, Flamant S, Rasko JE. Predicting microRNA targets and functions: traps for the unwary. Nat Methods 2009;6:397-8.
    • (2009) Nat Methods , vol.6 , pp. 397-398
    • Ritchie, W.1    Flamant, S.2    Rasko, J.E.3
  • 48
    • 77954073896 scopus 로고    scopus 로고
    • Profiling of miRNA expression and prediction of target genes
    • Sioud M, Cekaite L. Profiling of miRNA expression and prediction of target genes. Methods Mol Biol 2010;629:257-71.
    • (2010) Methods Mol Biol , vol.629 , pp. 257-271
    • Sioud, M.1    Cekaite, L.2
  • 49
    • 54049084380 scopus 로고    scopus 로고
    • A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition
    • Bracken CP, Gregory PA, Kolesnikoff N, Bert AG, Wang J, Shannon MF, et al. A double-negative feedback loop between ZEB1-SIP1 and the microRNA-200 family regulates epithelial-mesenchymal transition. Cancer Res 2008;68:7846-54.
    • (2008) Cancer Res , vol.68 , pp. 7846-7854
    • Bracken, C.P.1    Gregory, P.A.2    Kolesnikoff, N.3    Bert, A.G.4    Wang, J.5    Shannon, M.F.6
  • 50
    • 67651154718 scopus 로고    scopus 로고
    • MicroRNA-195 suppresses tumorigenicity and regulates G1/S transition of human hepatocellular carcinoma cells
    • Xu T, Zhu Y, Xiong Y, Ge YY, Yun JP, Zhuang SM. MicroRNA-195 suppresses tumorigenicity and regulates G1/S transition of human hepatocellular carcinoma cells. Hepatology 2009;50:113-21.
    • (2009) Hepatology , vol.50 , pp. 113-121
    • Xu, T.1    Zhu, Y.2    Xiong, Y.3    Ge, Y.Y.4    Yun, J.P.5    Zhuang, S.M.6


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