Crystallization and preliminary X-ray crystallographic analysis of the catalytic domain of membrane type 1 matrix metalloproteinase

Acta Crystallographica Section F:Structural Biology Communications

Volumn 70, Issue 2, 2014, Pages 232-235

  Ogata, Hideaki ^a   Decaneto, Elena ^a,b   Grossman, Moran ^b,c   Havenith, Martina ^b   Sagi, Irit ^c   Lubitz, Wolfgang ^a   Knipp, Markus ^a,b  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ENERGY CONVERSION   (Germany)

^b RUHR UNIVERSITY BOCHUM   (Germany)

^c WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

membrane type 1 matrix metalloproteinase

Indexed keywords

INTERSTITIAL COLLAGENASE; MATRIX METALLOPROTEINASE 14;

ARTICLE; CHEMISTRY; CRYSTALLIZATION; ENZYME ACTIVE SITE; HUMAN; METHODOLOGY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN CONFORMATION; X RAY CRYSTALLOGRAPHY;

MEMBRANE TYPE 1 MATRIX METALLOPROTEINASE;

CATALYTIC DOMAIN; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; HUMANS; MATRIX METALLOPROTEINASE 1; PROTEIN CONFORMATION;

EID: 84905446753     PISSN: None     EISSN: 2053230X     Source Type: Journal    
DOI: 10.1107/S2053230X13034857     Document Type: Article

References (20)

1. Bertini, I., Calderone, V., Cerofolini, L., Fragai, M., Geraldes, C. F. G. C. , Hermann, P., Luchinat, C., Parigi, G. & Teixeira, J. M. C. (2012). FEBS Lett. 586, 557-567
2. Bertini, I., Calderone, V., Fragai, M., Luchinat, C., Maletta, M. & Yeo, K. J. (2006). Angew. Chem. Int. Ed. 45, 7952-7955
3. Dhanaraj, V., Williams, M. G., Ye, Q.-Z., Molina, F., Johnson, L. L., Ortwine, D. F., Pavlovsky, A., Rubin, J. R., Skeean, R. W., White, A. D., Humblet, C., Hupe, D. J. & Blundell, T.L. (1999). Croat. Chem. Acta, 72, 575-591
4. Fernandez-Catalan, C., Bode,W., Huber, R., Turk, D., Calvete, J. J., Lichte, A., Tschesche, H. & Maskos, K. (1998). EMBO J. 17, 5238-5248
5. Grossman, M., Born, B., Heyden, M., Tworowski, D., Fields, G. B., Sagi, I. & Havenith, M. (2011). Nature Struct. Mol. Biol. 18, 1102-1108
6. Grossman, M., Tworowski, D., Dym, O. , Lee, M. H., Levy, Y., Murphy, G. & Sagi, I. (2010). Biochemistry, 49, 6184-6192
7. Gupta, S. P. & Patil, V. M. (2012). Matrix Metalloproteinase Inhibitors, edited by S. P. Gupta, pp. 35-56.
8. Basel: Springer. Kabsch, W. (2010). Acta Cryst. D66, 125 -132
9. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497
10. Murphy, G. & Nagase, H. (2008). Mol. Aspects Med. 29, 290-308
11. Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355-367
12. Nagase, H. & Woessner, J. F. Jr (1999). J. Biol. Chem. 274, 21491-21494.
13. Ndinguri M. W. Bhowmick M. Tokmina-Roszyk D. Robichaud T. K. Fields G. B,(2012). Molecules, 17,14230-14248.
14. Neumann, U. , Kubota, H., Frei, K., Ganu, V. & Leppert, D. (2004). Anal. Biochem. 328, 166-173
15. Pavlovsky, A. G., Williams, M. G., Ye, Q.-Z., Ortwine, D. F., Purchase, C. F. II, White, A . D., Dhanaraj, V., Roth, B. D., Johnson, L. L., Hupe, D. J., Humblet, C. & Blundell, T. L. (1999). Protein Sci. 8, 1455-1462
16. Tallant, C., Marrero, A. & Gomis-Rüth, F. X. (2010). Biochim. Biophys. Acta, 1803, 20-28
17. Udi, Y., Fragai, M., Grossman, M.,Mitternacht, S., Arad-Yellin, R., Calderone, V., Melikian, M., Toccafondi, M., Berezovsky, I. N., Luchinat, C. & Sagi, I. (2013). J. Mol. Biol. 425, 2330-2346
18. Vagin, A. & Teplyakov, A. (2010). Acta Cryst. D66, 22-25
19. Vargová, V., Pytliak, M. & Mechírová, V. (2012). Matrix Met alloproteinase Inhibitors, edited by S. P. Gupta, pp. 1-33. Basel: Springer.
20. Winn, M. D. et al. (2011). Acta Cryst. D67, 235-242