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Volumn 289, Issue 31, 2014, Pages 21605-21616

Mechanistic heterogeneity in site recognition by the structurally homologous DNA-binding domains of the ETS family transcription factors Ets-1 and PU.1

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BINDING SITES; HYDRATION; MACROPHAGES; TRANSCRIPTION FACTORS;

EID: 84905390120     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M114.575340     Document Type: Article
Times cited : (27)

References (68)
  • 1
    • 0027185597 scopus 로고
    • The ets multigene family is conserved throughout the Metazoa
    • Degnan, B. M., Degnan, S. M., Naganuma, T., and Morse, D. E. (1993) The ets multigene family is conserved throughout the Metazoa. Nucleic Acids Res. 21, 3479-3484 (Pubitemid 23241482)
    • (1993) Nucleic Acids Research , vol.21 , Issue.15 , pp. 3479-3484
    • Degnan, B.M.1    Degnan, S.M.2    Naganuma, T.3    Morse, D.E.4
  • 2
    • 0035839938 scopus 로고    scopus 로고
    • Biology of EWS/ETS fusions in Ewing's family tumors
    • DOI 10.1038/sj.onc.1204598
    • Arvand, A., and Denny, C. T. (2001) Biology of EWS/ETS fusions in Ewing's family tumors. Oncogene 20, 5747-5754 (Pubitemid 32928112)
    • (2001) Oncogene , vol.20 , Issue.40 REV. ISS. 4 , pp. 5747-5754
    • Arvand, A.1    Denny, C.T.2
  • 3
    • 70350109641 scopus 로고    scopus 로고
    • ETS gene fusions in prostate cancer
    • Clark, J. P., and Cooper, C. S. (2009) ETS gene fusions in prostate cancer. Nat. Rev. Urol. 6, 429-439
    • (2009) Nat. Rev. Urol. , vol.6 , pp. 429-439
    • Clark, J.P.1    Cooper, C.S.2
  • 5
    • 0031688174 scopus 로고    scopus 로고
    • Specificity within the ets family of transcription factors
    • Graves, B. J., and Petersen, J. M. (1998) Specificity within the ets family of transcription factors. Adv. Cancer Res. 75, 1-55 (Pubitemid 28429032)
    • (1998) Advances in Cancer Research , vol.75 , pp. 1-55
    • Graves, B.J.1    Petersen, J.M.2
  • 6
    • 0034717335 scopus 로고    scopus 로고
    • Regulation of B lymphocyte and macrophage development by graded expression of PU. 1
    • DeKoter, R. P., and Singh, H. (2000) Regulation of B lymphocyte and macrophage development by graded expression of PU. 1. Science 288, 1439-1441
    • (2000) Science , vol.288 , pp. 1439-1441
    • DeKoter, R.P.1    Singh, H.2
  • 7
    • 0032549567 scopus 로고    scopus 로고
    • Interaction between PU.1 and another Ets family transcription factor promotes macrophage-specific basal transcription initiation
    • DOI 10.1074/jbc.273.12.6662
    • Ross, I. L., Yue, X., Ostrowski, M. C., and Hume, D. A. (1998) Interaction between PU. 1 and another Ets family transcription factor promotes macrophage-specific basal transcription initiation. J. Biol. Chem. 273, 6662-6669 (Pubitemid 28160324)
    • (1998) Journal of Biological Chemistry , vol.273 , Issue.12 , pp. 6662-6669
    • Ross, I.L.1    Yue, X.2    Ostrowski, M.C.3    Hume, D.A.4
  • 8
    • 2442489942 scopus 로고    scopus 로고
    • Unique and Selective Effects of Five Ets Family Members, Elf3, Ets1, Ets2, PEA3, and PU.1, on the Promoter of the Type II Transforming Growth Factor-β Receptor Gene
    • DOI 10.1074/jbc.M314115200
    • Kopp, J. L., Wilder, P. J., Desler, M., Kim, J. H., Hou, J., Nowling, T., and Rizzino, A. (2004) Unique and selective effects of five Ets family members, Elf3, Ets1, Ets2, PEA3, and PU. 1, on the promoter of the type II transforming growth factor-beta receptor gene. J. Biol. Chem. 279, 19407-19420 (Pubitemid 38623374)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.19 , pp. 19407-19420
    • Kopp, J.L.1    Wilder, P.J.2    Desler, M.3    Kim, J.-H.4    Hou, J.5    Nowling, T.6    Rizzino, A.7
  • 9
    • 80455144479 scopus 로고    scopus 로고
    • Pioneer transcription factors: Establishing competence for gene expression
    • Zaret, K. S., and Carroll, J. S. (2011) Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 25, 2227-2241
    • (2011) Genes Dev , vol.25 , pp. 2227-2241
    • Zaret, K.S.1    Carroll, J.S.2
  • 10
    • 84862489540 scopus 로고    scopus 로고
    • Dynamic epigenetic enhancer signatures reveal key transcription factors associated with monocytic differentiation states
    • Pham, T. H., Benner, C., Lichtinger, M., Schwarzfischer, L., Hu, Y., Andreesen, R., Chen, W., and Rehli, M. (2012) Dynamic epigenetic enhancer signatures reveal key transcription factors associated with monocytic differentiation states. Blood 119, e161-e171
    • (2012) Blood , vol.119
    • Pham, T.H.1    Benner, C.2    Lichtinger, M.3    Schwarzfischer, L.4    Hu, Y.5    Andreesen, R.6    Chen, W.7    Rehli, M.8
  • 11
    • 77952567987 scopus 로고    scopus 로고
    • Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
    • Heinz, S., Benner, C., Spann, N., Bertolino, E., Lin, Y. C., Laslo, P., Cheng, J. X., Murre, C., Singh, H., and Glass, C. K. (2010) Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell 38, 576-589
    • (2010) Mol. Cell , vol.38 , pp. 576-589
    • Heinz, S.1    Benner, C.2    Spann, N.3    Bertolino, E.4    Lin, Y.C.5    Laslo, P.6    Cheng, J.X.7    Murre, C.8    Singh, H.9    Glass, C.K.10
  • 15
    • 0032512459 scopus 로고    scopus 로고
    • The structure of GABPα/β: An ETS domain-ankyrin repeat heterodimer bound to DNA
    • DOI 10.1126/science.279.5353.1037
    • Batchelor, A. H., Piper, D. E., de la Brousse, F. C., McKnight, S. L., and Wolberger, C. (1998) The structure of GABPα/β: an ETS domain-ankyrin repeat heterodimer bound to DNA. Science 279, 1037-1041 (Pubitemid 28113306)
    • (1998) Science , vol.279 , Issue.5353 , pp. 1037-1041
    • Batchelor, A.H.1    Piper, D.E.2    Charles, D.L.B.F.3    McKnight, S.L.4    Wolberger, C.5
  • 16
    • 0032135105 scopus 로고    scopus 로고
    • Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: Insights into DNA sequence discrimination by Ets proteins
    • Mo, Y., Vaessen, B., Johnston, K., and Marmorstein, R. (1998) Structures of SAP-1 bound to DNA targets from the E74 and c-fos promoters: insights into DNA sequence discrimination by Ets proteins. Mol. Cell 2, 201-212 (Pubitemid 128373645)
    • (1998) Molecular Cell , vol.2 , Issue.2 , pp. 201-212
    • Mo, Y.1    Vaessen, B.2    Johnston, K.3    Marmorstein, R.4
  • 17
    • 0034031280 scopus 로고    scopus 로고
    • Structure of the Elk-1-DNA complex reveals how DNA-distal residues affect ETS domain recognition of DNA
    • DOI 10.1038/74055
    • Mo, Y., Vaessen, B., Johnston, K., and Marmorstein, R. (2000) Structure of the elk-1-DNA complex reveals how DNA-distal residues affect ETS domain recognition of DNA. Nat. Struct. Biol. 7, 292-297 (Pubitemid 30194452)
    • (2000) Nature Structural Biology , vol.7 , Issue.4 , pp. 292-297
    • Mo, Y.1    Vaessen, B.2    Johnston, K.3    Marmorstein, R.4
  • 18
    • 84861354601 scopus 로고    scopus 로고
    • Sequence discrimination by DNA-binding domain of ETS family transcription factor PU. 1 is linked to specific hydration of protein-DNA interface
    • Poon, G. M. K. (2012) Sequence discrimination by DNA-binding domain of ETS family transcription factor PU. 1 is linked to specific hydration of protein-DNA interface. J. Biol. Chem. 287, 18297-18307
    • (2012) J. Biol. Chem. , vol.287 , pp. 18297-18307
    • Poon, G.M.K.1
  • 19
    • 38749146474 scopus 로고    scopus 로고
    • Predicting ultraviolet spectrum of single stranded and double stranded deoxyribonucleic acids
    • Tataurov, A. V., You, Y., and Owczarzy, R. (2008) Predicting ultraviolet spectrum of single stranded and double stranded deoxyribonucleic acids. Biophys. Chem. 133, 66-70
    • (2008) Biophys. Chem. , vol.133 , pp. 66-70
    • Tataurov, A.V.1    You, Y.2    Owczarzy, R.3
  • 20
    • 0037427446 scopus 로고    scopus 로고
    • Base coupling in sequence-specific site recognition by the ETS domain of murine PU.1
    • DOI 10.1016/S0022-2836(03)00362-0
    • Poon, G. M., and Macgregor, R. B., Jr. (2003) Base coupling in sequence-specific site recognition by the ETS domain of murine PU. 1. J. Mol. Biol. 328, 805-819 (Pubitemid 36506888)
    • (2003) Journal of Molecular Biology , vol.328 , Issue.4 , pp. 805-819
    • Poon, G.M.K.1    Macgregor Jr., R.B.2
  • 21
    • 0027494858 scopus 로고
    • PU.1 is a component of a multiprotein complex which binds an essential site in the murine immunoglobulin lambda2-4 enhancer
    • Eisenbeis, C. F., Singh, H., and Storb, U. (1993) PU. 1 is a component of a multiprotein complex which binds an essential site in the murine immunoglobulin lambda 2-4 enhancer. Mol. Cell. Biol. 13, 6452-6461 (Pubitemid 23292639)
    • (1993) Molecular and Cellular Biology , vol.13 , Issue.10 , pp. 6452-6461
    • Eisenbeis, C.F.1    Singh, H.2    Storb, U.3
  • 22
    • 0345118147 scopus 로고    scopus 로고
    • A thermodynamic basis of DNA sequence selectivity by the ETS domain of murine PU.1
    • DOI 10.1016/j.jmb.2003.09.046
    • Poon, G. M., and Macgregor, R. B., Jr. (2004) A thermodynamic basis of DNAsequence selectivity by the ETS domain of murine PU. 1. J. Mol. Biol. 335, 113-127 (Pubitemid 37494966)
    • (2004) Journal of Molecular Biology , vol.335 , Issue.1 , pp. 113-127
    • Poon, G.M.K.1    Macgregor Jr., R.B.2
  • 23
    • 0026729269 scopus 로고
    • Interaction of murine ets-1 with GGA-binding sites establishes the ETS domain as a new DNA-binding motif
    • Nye, J. A., Petersen, J. M., Gunther, C. V., Jonsen, M. D., and Graves, B. J. (1992) Interaction of murine ets-1 with GGA-binding sites establishes the ETS domain as a new DNA-binding motif. Genes Dev. 6, 975-990
    • (1992) Genes Dev , vol.6 , pp. 975-990
    • Nye, J.A.1    Petersen, J.M.2    Gunther, C.V.3    Jonsen, M.D.4    Graves, B.J.5
  • 24
    • 0037162456 scopus 로고    scopus 로고
    • Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components
    • Timasheff, S. N. (2002) Protein-solvent preferential interactions, protein hydration, and the modulation of biochemical reactions by solvent components. Proc. Natl. Acad. Sci. U.S.A. 99, 9721-9726
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 9721-9726
    • Timasheff, S.N.1
  • 25
    • 0037133228 scopus 로고    scopus 로고
    • The sequence-specific association of the ETS domain of murine PU.1 with DNA exhibits unusual energetics
    • DOI 10.1021/bi015572q
    • Poon, G. M., Groß, P., and Macgregor, R. B., Jr. (2002) The sequence-specific association of the ETS domain of murine PU. 1 with DNA exhibits unusual energetics. Biochemistry 41, 2361-2371 (Pubitemid 34160898)
    • (2002) Biochemistry , vol.41 , Issue.7 , pp. 2361-2371
    • Poon, G.M.K.1    Gross, P.2    Macgregor Jr., R.B.3
  • 26
    • 0017146579 scopus 로고
    • Ion effects on ligand-nucleic acid interactions
    • Record, M. T., Jr., Lohman, M. L., and De Haseth, P. (1976) Ion effects on ligand-nucleic acid interactions. J. Mol. Biol. 107, 145-158
    • (1976) J. Mol. Biol. , vol.107 , pp. 145-158
    • Record Jr., M.T.1    Lohman, M.L.2    De Haseth, P.3
  • 27
    • 77950692203 scopus 로고    scopus 로고
    • Explicit formulation of titration models for isothermal titration calorimetry
    • Poon, G. M. (2010) Explicit formulation of titration models for isothermal titration calorimetry. Anal. Biochem. 400, 229-236
    • (2010) Anal. Biochem. , vol.400 , pp. 229-236
    • Poon, G.M.1
  • 28
    • 84905385866 scopus 로고    scopus 로고
    • Probing solution thermodynamics by microcalorimetry
    • (Moreno-Piraján, J. C., ed) InTech, Rijeka, Croatia
    • Poon, G. M. (2011) Probing solution thermodynamics by microcalorimetry. In Thermodynamics: Interaction Studies: Solids, Liquids and Gases (Moreno-Piraján, J. C., ed) pp. 871-890, InTech, Rijeka, Croatia
    • (2011) Thermodynamics: Interaction Studies: Solids, Liquids and Gases , pp. 871-890
    • Poon, G.M.1
  • 29
    • 84861409513 scopus 로고    scopus 로고
    • DNA binding regulates the self-association of the ETS domain of PU. 1 in a sequence-dependent manner
    • Poon, G. M. K. (2012) DNA binding regulates the self-association of the ETS domain of PU. 1 in a sequence-dependent manner. Biochemistry 51, 4096-4107
    • (2012) Biochemistry , vol.51 , pp. 4096-4107
    • Poon, G.M.K.1
  • 30
    • 84877580324 scopus 로고    scopus 로고
    • Probing the electrostatics and pharmacological modulation of sequence-specific binding by the DNA-binding domain of the ETS family transcription factor PU. 1: A binding affinity and kinetics investigation
    • Munde, M., Poon, G. M., and Wilson, W. D. (2013) Probing the electrostatics and pharmacological modulation of sequence-specific binding by the DNA-binding domain of the ETS family transcription factor PU. 1: a binding affinity and kinetics investigation. J. Mol. Biol. 425, 1655-1669
    • (2013) J. Mol. Biol. , vol.425 , pp. 1655-1669
    • Munde, M.1    Poon, G.M.2    Wilson, W.D.3
  • 31
    • 48449084095 scopus 로고    scopus 로고
    • RAPIDO: A web server for the alignment of protein structures in the presence of conformational changes
    • Mosca, R., and Schneider, T. R. (2008) RAPIDO: a web server for the alignment of protein structures in the presence of conformational changes. Nucleic Acids Res. 36, W42-W46
    • (2008) Nucleic Acids Res , vol.36
    • Mosca, R.1    Schneider, T.R.2
  • 32
    • 0035697276 scopus 로고    scopus 로고
    • Structural studies of Ets-1/Pax5 complex formation on DNA
    • DOI 10.1016/S1097-2765(01)00410-5
    • Garvie, C. W., Hagman, J., and Wolberger, C. (2001) Structural studies of Ets-1/Pax5 complex formation on DNA. Mol. Cell 8, 1267-1276 (Pubitemid 34084998)
    • (2001) Molecular Cell , vol.8 , Issue.6 , pp. 1267-1276
    • Garvie, C.W.1    Hagman, J.2    Wolberger, C.3
  • 33
    • 0029670530 scopus 로고    scopus 로고
    • A new pattern for helix-turn-helix recognition revealed by the PU. 1 ETS-domain-DNA complex
    • Kodandapani, R., Pio, F., Ni, C. Z., Piccialli, G., Klemsz, M., McKercher, S., Maki, R. A., and Ely, K. R. (1996) A new pattern for helix-turn-helix recognition revealed by the PU. 1 ETS-domain-DNA complex. Nature 380, 456-460
    • (1996) Nature , vol.380 , pp. 456-460
    • Kodandapani, R.1    Pio, F.2    Ni, C.Z.3    Piccialli, G.4    Klemsz, M.5    McKercher, S.6    Maki, R.A.7    Ely, K.R.8
  • 34
    • 0029130871 scopus 로고
    • Macromolecules and water: Probing with osmotic stress
    • Parsegian, V. A., Rand, R. P., and Rau, D. C. (1995) Macromolecules and water: probing with osmotic stress. Methods Enzymol. 259, 43-94
    • (1995) Methods Enzymol , vol.259 , pp. 43-94
    • Parsegian, V.A.1    Rand, R.P.2    Rau, D.C.3
  • 35
    • 0030044420 scopus 로고    scopus 로고
    • Solution structure of the ETS domain from murine Ets-1: A winged helix-turn-helix DNA binding motif
    • Donaldson, L. W., Petersen, J. M., Graves, B. J., and McIntosh, L. P. (1996) Solution structure of the ETS domain from murine Ets-1: a winged helix-turn- helix DNA binding motif. EMBO J. 15, 125-134 (Pubitemid 26020395)
    • (1996) EMBO Journal , vol.15 , Issue.1 , pp. 125-134
    • Donaldson, L.W.1    Petersen, J.M.2    Graves, B.J.3    McIntosh, L.P.4
  • 37
    • 0028874393 scopus 로고
    • Modulation of transcription factor Ets-1 DNA binding: DNA-induced unfolding of an alpha helix
    • Petersen, J. M., Skalicky, J. J., Donaldson, L. W., McIntosh, L. P., Alber, T., and Graves, B. J. (1995) Modulation of transcription factor Ets-1 DNA binding: DNA-induced unfolding of an alpha helix. Science 269, 1866-1869
    • (1995) Science , vol.269 , pp. 1866-1869
    • Petersen, J.M.1    Skalicky, J.J.2    Donaldson, L.W.3    McIntosh, L.P.4    Alber, T.5    Graves, B.J.6
  • 38
    • 0030038146 scopus 로고    scopus 로고
    • Structural coupling of the inhibitory regions flanking the ETS domain of murine Ets-1
    • Skalicky, J. J., Donaldson, L. W., Petersen, J. M., Graves, B. J., and McIntosh, L. P. (1996) Structural coupling of the inhibitory regions flanking the ETS domain of murine Ets-1. Protein Sci. 5, 296-309 (Pubitemid 26054286)
    • (1996) Protein Science , vol.5 , Issue.2 , pp. 296-309
    • Skalicky, J.J.1    Donaldson, L.W.2    Petersen, J.M.3    Graves, B.J.4    McIntosh, L.P.5
  • 40
    • 0029958777 scopus 로고    scopus 로고
    • Characterization of the cooperative function of inhibitory sequences in Ets-1
    • Jonsen, M. D., Petersen, J. M., Xu, Q. P., and Graves, B. J. (1996) Characterization of the cooperative function of inhibitory sequences in Ets-1. Mol. Cell. Biol. 16, 2065-2073 (Pubitemid 26123726)
    • (1996) Molecular and Cellular Biology , vol.16 , Issue.5 , pp. 2065-2073
    • Jonsen, M.D.1    Petersen, J.M.2    Xu, Q.-P.3    Graves, B.J.4
  • 41
    • 0033025410 scopus 로고    scopus 로고
    • Physiological significance of volume-regulatory transporters
    • O'Neill, W. C. (1999) Physiological significance of volume-regulatory transporters. Am. J. Physiol. 276, C995-C1011
    • (1999) Am. J. Physiol. , vol.276
    • O'Neill, W.C.1
  • 42
    • 84876734648 scopus 로고    scopus 로고
    • NFAT5 in cellular adaptation to hypertonic stress: Regulations and functional significance
    • Cheung, C. Y., and Ko, B. C. (2013) NFAT5 in cellular adaptation to hypertonic stress: regulations and functional significance. J. Mol. Signal. 8, 5
    • (2013) J. Mol. Signal. , vol.8 , pp. 5
    • Cheung, C.Y.1    Ko, B.C.2
  • 43
    • 0032525250 scopus 로고    scopus 로고
    • Myeloid development is selectively disrupted in PU.1 null mice
    • Anderson, K. L., Smith, K. A., Conners, K., McKercher, S. R., Maki, R. A., and Torbett, B. E. (1998) Myeloid development is selectively disrupted in PU. 1 null mice. Blood 91, 3702-3710 (Pubitemid 28225738)
    • (1998) Blood , vol.91 , Issue.10 , pp. 3702-3710
    • Anderson, K.L.1    Smith, K.A.2    Conners, K.3    McKercher, S.R.4    Maki, R.A.5    Torbett, B.E.6
  • 44
    • 0034665729 scopus 로고    scopus 로고
    • DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition
    • Szymczyna, B. R., and Arrowsmith, C. H. (2000) DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition. J. Biol. Chem. 275, 28363-28370
    • (2000) J. Biol. Chem. , vol.275 , pp. 28363-28370
    • Szymczyna, B.R.1    Arrowsmith, C.H.2
  • 46
    • 41949107014 scopus 로고    scopus 로고
    • Gene expression profiling in brain following acute systemic hypertonicity: Novel genes possibly involved in osmoadaptation
    • DOI 10.1111/j.1471-4159.2008.05222.x
    • Maallem, S., Wierinckx, A., Lachuer, J., Kwon, M. H., and Tappaz, M. L. (2008) Gene expression profiling in brain following acute systemic hypertonicity: novel genes possibly involved in osmoadaptation. J. Neurochem. 105, 1198-1211 (Pubitemid 351590785)
    • (2008) Journal of Neurochemistry , vol.105 , Issue.4 , pp. 1198-1211
    • Maallem, S.1    Wierinckx, A.2    Lachuer, J.3    Kwon, M.H.4    Tappaz, M.L.5
  • 48
    • 20644466433 scopus 로고    scopus 로고
    • NFAT proteins: Key regulators of T-cell development and function
    • Macian, F. (2005) NFAT proteins: key regulators of T-cell development and function. Nat. Rev. Immunol. 5, 472-484
    • (2005) Nat. Rev. Immunol. , vol.5 , pp. 472-484
    • Macian, F.1
  • 49
    • 70349561410 scopus 로고    scopus 로고
    • Combined genome-wide expression profiling and targeted RNA interference in primary mouse macrophages reveals perturbation of transcriptional networks associated with interferon signalling
    • Lacaze, P., Raza, S., Sing, G., Page, D., Forster, T., Storm, P., Craigon, M., Awad, T., Ghazal, P., and Freeman, T. C. (2009) Combined genome-wide expression profiling and targeted RNA interference in primary mouse macrophages reveals perturbation of transcriptional networks associated with interferon signalling. BMC Genomics 10, 372
    • (2009) BMC Genomics , vol.10 , pp. 372
    • Lacaze, P.1    Raza, S.2    Sing, G.3    Page, D.4    Forster, T.5    Storm, P.6    Craigon, M.7    Awad, T.8    Ghazal, P.9    Freeman, T.C.10
  • 50
    • 60349084960 scopus 로고    scopus 로고
    • Transcriptomic profiling identifies a PU. 1 regulatory network in macrophages
    • Weigelt, K., Lichtinger, M., Rehli, M., and Langmann, T. (2009) Transcriptomic profiling identifies a PU. 1 regulatory network in macrophages. Biochem. Biophys. Res. Commun. 380, 308-312
    • (2009) Biochem. Biophys. Res. Commun. , vol.380 , pp. 308-312
    • Weigelt, K.1    Lichtinger, M.2    Rehli, M.3    Langmann, T.4
  • 51
    • 84893306183 scopus 로고    scopus 로고
    • Structure-dependent inhibition of the ETS-family transcription factor PU. 1 by novel heterocyclic diamidines
    • Munde, M., Wang, S., Kumar, A., Stephens, C. E., Farahat, A. A., Boykin, D. W., Wilson, W. D., and Poon, G. M. (2014) Structure-dependent inhibition of the ETS-family transcription factor PU. 1 by novel heterocyclic diamidines. Nucleic Acids Res. 42, 1379-1390
    • (2014) Nucleic Acids Res , vol.42 , pp. 1379-1390
    • Munde, M.1    Wang, S.2    Kumar, A.3    Stephens, C.E.4    Farahat, A.A.5    Boykin, D.W.6    Wilson, W.D.7    Poon, G.M.8
  • 53
    • 23444450909 scopus 로고
    • Coupling of local folding to site-specific binding of proteins to DNA
    • Spolar, R. S., and Record, M. T., Jr. (1994) Coupling of local folding to site-specific binding of proteins to DNA. Science 263, 777-784 (Pubitemid 24093205)
    • (1994) Science , vol.263 , Issue.5148 , pp. 777-784
    • Spolar, R.S.1    Record Jr., M.T.2
  • 54
    • 0008023849 scopus 로고    scopus 로고
    • Hydrophobic effect, water structure, and heat capacity changes
    • Sharp, K. A., and Madan, B. (1997) Hydrophobic effect, water structure, and heat capacity changes. J. Phys. Chem. B 101, 4343-4348 (Pubitemid 127609268)
    • (1997) Journal of Physical Chemistry B , vol.101 , Issue.21 , pp. 4343-4348
    • Sharp, K.A.1    Madan, B.2
  • 55
    • 0034681955 scopus 로고    scopus 로고
    • Vapor pressure osmometry studies of osmolyte-protein interactions: Implications for the action of osmoprotectants in vivo and for the interpretation of 'osmotic stress' experiments in vitro
    • DOI 10.1021/bi992887l
    • Courtenay, E. S., Capp, M. W., Anderson, C. F., and Record, M. T. (2000) Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro. Biochemistry 39, 4455-4471 (Pubitemid 30212662)
    • (2000) Biochemistry , vol.39 , Issue.15 , pp. 4455-4471
    • Courtenay, E.S.1    Capp, M.W.2    Anderson, C.F.3    Record Jr., M.T.4
  • 56
    • 0026498015 scopus 로고
    • Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA: Possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions
    • Ha, J.-H., Capp, M. W., Hohenwalter, M. D., Baskerville, M., and Record, M. T., Jr. (1992) Thermodynamic stoichiometries of participation of water, cations and anions in specific and non-specific binding of lac repressor to DNA: possible thermodynamic origins of the "glutamate effect" on protein-DNA interactions. J. Mol. Biol. 228, 252-264
    • (1992) J. Mol. Biol. , vol.228 , pp. 252-264
    • Ha, J.-H.1    Capp, M.W.2    Hohenwalter, M.D.3    Baskerville, M.4    Record Jr., M.T.5
  • 57
    • 0035816212 scopus 로고    scopus 로고
    • Specific and non-specific interactions of integration host factor with DNA: Thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding
    • DOI 10.1006/jmbi.2001.4768
    • Holbrook, J. A., Tsodikov, O. V., Saecker, R. M., and Record, M. T., Jr. (2001) Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding. J. Mol. Biol. 310, 379-401 (Pubitemid 32664875)
    • (2001) Journal of Molecular Biology , vol.310 , Issue.2 , pp. 379-401
    • Holbrook, J.A.1    Tsodikov, O.V.2    Saecker, R.M.3    Record, J.M.T.4
  • 58
    • 84895920876 scopus 로고    scopus 로고
    • Steric mechanism of auto-inhibitory regulation of specific and non-specific DNA binding by the ETS transcriptional repressor ETV6
    • De, S., Chan, A. C., Coyne, H. J., 3rd, Bhachech, N., Hermsdorf, U., Okon, M., Murphy, M. E., Graves, B. J., and McIntosh, L. P. (2013) Steric mechanism of auto-inhibitory regulation of specific and non-specific DNA binding by the ETS transcriptional repressor ETV6. J. Mol. Biol. 426, 1390-1406
    • (2013) J. Mol. Biol. , vol.426 , pp. 1390-1406
    • De, S.1    Chan, A.C.2    Coyne III, H.J.3    Bhachech, N.4    Hermsdorf, U.5    Okon, M.6    Murphy, M.E.7    Graves, B.J.8    McIntosh, L.P.9
  • 59
    • 77953315305 scopus 로고    scopus 로고
    • DNA binding by the ETS protein TEL (ETV6) is regulated by autoinhibition and self-association
    • Green, S. M., Coyne, H. J., 3rd, McIntosh, L. P., and Graves, B. J. (2010) DNA binding by the ETS protein TEL (ETV6) is regulated by autoinhibition and self-association. J. Biol. Chem. 285, 18496-18504
    • (2010) J. Biol. Chem. , vol.285 , pp. 18496-18504
    • Green, S.M.1    Coyne III, H.J.2    McIntosh, L.P.3    Graves, B.J.4
  • 63
    • 35748937053 scopus 로고    scopus 로고
    • Tonicity-regulated gene expression
    • Ferraris, J. D., and Burg, M. B. (2007) Tonicity-regulated gene expression. Methods Enzymol. 428, 279-296
    • (2007) Methods Enzymol , vol.428 , pp. 279-296
    • Ferraris, J.D.1    Burg, M.B.2
  • 64
    • 0035001329 scopus 로고    scopus 로고
    • Hypertonicity-induced phosphorylation and nuclear localization of the transcription factor TonEBP
    • Dahl, S. C., Handler, J. S., and Kwon, H. M. (2001) Hypertonicity-induced phosphorylation and nuclear localization of the transcription factor TonEBP. Am. J. Physiol. Cell Physiol. 280, C248-C253
    • (2001) Am. J. Physiol. Cell Physiol. , vol.280
    • Dahl, S.C.1    Handler, J.S.2    Kwon, H.M.3
  • 65
    • 0036294669 scopus 로고    scopus 로고
    • Dimerization is required for phosphorylation and DNA binding of TonEBP/NFAT5
    • DOI 10.1016/S0006-291X(02)00572-7, PII S0006291X02005727
    • Lee, S. D., Woo, S. K., and Kwon, H. M. (2002) Dimerization is required for phosphorylation and DNA binding of TonEBP/NFAT5. Biochem. Biophys. Res. Commun. 294, 968-975 (Pubitemid 34687144)
    • (2002) Biochemical and Biophysical Research Communications , vol.294 , Issue.5 , pp. 968-975
    • Lee, S.D.1    Woo, S.K.2    Kwon H.Moo3
  • 68
    • 22344457014 scopus 로고    scopus 로고
    • enoLOGOS: A versatile web tool for energy normalized sequence logos
    • DOI 10.1093/nar/gki439
    • Workman, C. T., Yin, Y., Corcoran, D. L., Ideker, T., Stormo, G. D., and Benos, P. V. (2005) enoLOGOS: a versatile web tool for energy normalized sequence logos. Nucleic Acids Res. 33, W389-W392 (Pubitemid 44529949)
    • (2005) Nucleic Acids Research , vol.33 , Issue.WEB. SERV. ISS.
    • Workman, C.T.1    Yin, Y.2    Corcoran, D.L.3    Ideker, T.4    Stormo, G.D.5    Benos, P.6


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