Phenotype refinement strengthens the association of AHR and CYP1A1 genotype with caffeine consumption

PLoS ONE

Volumn 9, Issue 7, 2014, Pages

  McMahon, George ^a   Taylor, Amy E ^a   Davey Smith, George ^a   Munafò, Marcus R ^a  

^a UNIVERSITY OF BRISTOL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC HYDROCARBON RECEPTOR; CAFFEINE; CYTOCHROME P450 1A1; AHR PROTEIN, HUMAN; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR;

AHR GENE; ARTICLE; COFFEE; CYP1A1 GENE; DIETARY INTAKE; FEMALE; GENE FREQUENCY; GENETIC VARIABILITY; GENOTYPE; HUMAN; PHENOTYPE; PREGNANT WOMAN; SCORING SYSTEM; SELF REPORT; SINGLE NUCLEOTIDE POLYMORPHISM; SOFT DRINK; TEA; UNITED KINGDOM; ADULT; DRINKING BEHAVIOR; GENETIC VARIATION; GENETICS; LIFESTYLE; LONGITUDINAL STUDY; METABOLISM; PREGNANCY; QUESTIONNAIRE;

ADULT; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; CAFFEINE; CYTOCHROME P-450 CYP1A1; DRINKING BEHAVIOR; FEMALE; GENETIC VARIATION; GENOTYPE; HUMANS; LIFE STYLE; LONGITUDINAL STUDIES; PHENOTYPE; POLYMORPHISM, SINGLE NUCLEOTIDE; PREGNANCY; RECEPTORS, ARYL HYDROCARBON; SELF REPORT; SURVEYS AND QUESTIONNAIRES;

EID: 84905041078     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0103448     Document Type: Article

References (44)

1. Drewnowski A (2001) The science and complexity of bitter taste. Nutr Rev 59: 163-169.
2. Hughes JR, Higgins ST, Bickel WK, Hunt WK, Fenwick JW, et al. (1991) Caffeine self-administration, withdrawal, and adverse effects among coffee drinkers. Arch Gen Psychiatry 48: 611-617.
3. Conterio F, Chiarelli B (1962) Study of the inheritance of some daily life habits. Heredity (Edinb) 17: 347-359.
4. Hettema JM, Corey LA, Kendler KS (1999) A multivariate genetic analysis of the use of tobacco, alcohol, and caffeine in a population based sample of male and female twins. Drug Alcohol Depend 57: 69-78. (Pubitemid 29452957)
5. Kendler KS, Prescott CA (1999) Caffeine intake, tolerance, and withdrawal in women: a population-based twin study. Am J Psychiatry 156: 223-228. (Pubitemid 29077113)
6. Luciano M, Kirk KM, Heath AC, Martin NG (2005) The genetics of tea and coffee drinking and preference for source of caffeine in a large community sample of Australian twins. Addiction 100: 1510-1517. (Pubitemid 41442320)
7. Reynolds CA, Barlow T, Pedersen NL (2006) Alcohol, tobacco and caffeine use: spouse similarity processes. Behav Genet 36: 201-215. (Pubitemid 43673563)
8. Swan GE, Carmelli D, Cardon LR (1996) The consumption of tobacco, alcohol, and coffee in Caucasian male twins: a multivariate genetic analysis. J Subst Abuse 8: 19-31. (Pubitemid 26233199)
9. Vink JM, Staphorsius AS, Boomsma DI (2009) A genetic analysis of coffee consumption in a sample of Dutch twins. Twin Res Hum Genet 12: 127-131.
10. Amin N, Byrne E, Johnson J, Chenevix-Trench G, Walter S, et al. (2012) Genome-wide association analysis of coffee drinking suggests association with CYP1A1/CYP1A2 and NRCAM. Mol Psychiatry 17: 1116-1129.
11. Cornelis MC, Monda KL, Yu K, Paynter N, Azzato EM, et al. (2011) Genome-wide meta-analysis identifies regions on 7p21 (AHR) and 15q24 (CYP1A2) as determinants of habitual caffeine consumption. PLoS Genet 7: e1002033.
12. Sulem P, Gudbjartsson DF, Geller F, Prokopenko I, Feenstra B, et al. (2011) Sequence variants at CYP1A1-CYP1A2 and AHR associate with coffee consumption. Hum Mol Genet 20: 2071-2077.
13. Josse AR, Da Costa LA, Campos H, El-Sohemy A (2012) Associations between polymorphisms in the AHR and CYP1A1-CYP1A2 gene regions and habitual caffeine consumption. Am J Clin Nutr 96: 665-671.
14. Carrillo JA, Benitez J (1996) CYP1A2 activity, gender and smoking, as variables influencing the toxicity of caffeine. Br J Clin Pharmacol 41: 605-608. (Pubitemid 26184683)
15. Munafo MR, Timofeeva MN, Morris RW, Prieto-Merino D, Sattar N, et al. (2012) Association between genetic variants on chromosome 15q25 locus and objective measures of tobacco exposure. J Natl Cancer Inst 104: 740-748.
16. Fraser A, Macdonald-Wallis C, Tilling K, Boyd A, Golding J, et al. (2013) Cohort Profile: the Avon Longitudinal Study of Parents and Children: ALSPAC mothers cohort. Int J Epidemiol 42: 97-110.
17. Ministry-of-Agriculture-Fisheries-and-Food (1998) MFF UK - Survey of caffeine and other methylxanthines in energy drinks and other caffeine-containing products (updated). London: Ministry-of-Agriculture- Fisheries-and-Food.
18. Food-Standards-Agency (2004) Survey of caffeine levels in hot beverages. Food Standards Agency.
19. Yang J, Benyamin B, McEvoy BP, Gordon S, Henders AK, et al. (2010) Common SNPs explain a large proportion of the heritability for human height. Nat Genet 42: 565-569.
20. Gage SH, Davey Smith G, Zammit S, Hickman M, Munafo MR (2013) Using Mendelian Randomisation to Infer Causality in Depression and Anxiety Research. Depress Anxiety.
21. Davey Smith G, Ebrahim S (2003) 'Mendelian randomization': can genetic epidemiology contribute to understanding environmental determinants of disease? Int J Epidemiol 32: 1-22.
22. O'Keefe JH, Bhatti SK, Patil HR, Dinicolantonio JJ, Lucan SC, et al. (2013) Effects of Habitual Coffee Consumption on Cardiometabolic Disease, Cardiovascular Health, and All-cause Mortality. J Am Coll Cardiol.
23. Campos H, Baylin A (2007) Coffee consumption and risk of type 2 diabetes and heart disease. Nutr Rev 65: 173-179. (Pubitemid 351804374)
24. Freedman ND, Park Y, Abnet CC, Hollenbeck AR, Sinha R (2012) Association of coffee drinking with total and cause-specific mortality. N Engl J Med 366: 1891-1904.
25. Je Y, Giovannucci E (2012) Coffee consumption and risk of endometrial cancer: findings from a large up-to-date meta-analysis. Int J Cancer 131: 1700-1710.
26. Lai GY, Weinstein SJ, Albanes D, Taylor PR, McGlynn KA, et al. (2013) The association of coffee intake with liver cancer incidence and chronic liver disease mortality in male smokers. Br J Cancer.
27. Wilson KM, Balter K, Moller E, Adami HO, Andren O, et al. (2013) Coffee and risk of prostate cancer incidence and mortality in the Cancer of the Prostate in Sweden Study. Cancer Causes Control 24: 1575-1581.
28. Lara DR (2010) Caffeine, mental health, and psychiatric disorders. J Alzheimers Dis 20 Suppl 1: S239-248.
29. Lucas M, Mirzaei F, Pan A, Okereke OI, Willett WC, et al. (2011) Coffee, caffeine, and risk of depression among women. Arch Intern Med 171: 1571-1578.
30. Eskelinen MH, Kivipelto M (2010) Caffeine as a protective factor in dementia and Alzheimer's disease. J Alzheimers Dis 20 Suppl 1: S167-174.
31. Infante-Rivard C, Fernandez A, Gauthier R, David M, Rivard GE (1993) Fetal loss associated with caffeine intake before and during pregnancy. JAMA 270: 2940-2943. (Pubitemid 24000800)
32. Group CS (2008) Maternal caffeine intake during pregnancy and risk of fetal growth restriction: a large prospective observational study. BMJ 337: a2332.
33. Liu H, Yao K, Zhang W, Zhou J, Wu T, et al. (2012) Coffee consumption and risk of fractures: a meta-analysis. Arch Med Sci 8: 776-783.
34. Ebrahim S, Davey Smith G (2008) Mendelian randomization: can genetic epidemiology help redress the failures of observational epidemiology? Hum Genet 123: 15-33.
35. Schliep KC, Schisterman EF, Mumford SL, Perkins NJ, Ye A, et al. (2013) Validation of different instruments for caffeine measurement among premenopausal women in the BioCycle study. Am J Epidemiol 177: 690-699.
36. Davey Smith G, Ebrahim S (2005) What can mendelian randomisation tell us about modifiable behavioural and environmental exposures? BMJ 330: 1076-1079.
37. Frayling TM, Timpson NJ, Weedon MN, Zeggini E, Freathy RM, et al. (2007) A common variant in the FTO gene is associated with body mass index and predisposes to childhood and adult obesity. Science 316: 889-894. (Pubitemid 46764279)
38. Freathy RM, Kazeem GR, Morris RW, Johnson PC, Paternoster L, et al. (2011) Genetic variation at CHRNA5-CHRNA3-CHRNB4 interacts with smoking status to influence body mass index. Int J Epidemiol 40: 1617-1628.
39. Nordestgaard BG, Palmer TM, Benn M, Zacho J, Tybjaerg-Hansen A, et al. (2012) The effect of elevated body mass index on ischemic heart disease risk: causal estimates from a Mendelian randomisation approach. PLoS Med 9: e1001212.
40. Timpson NJ, Harbord R, Davey Smith G, Zacho J, Tybjaerg-Hansen A, et al. (2009) Does greater adiposity increase blood pressure and hypertension risk? Mendelian randomization using the FTO/MC4R genotype. Hypertension 54: 84-90.
41. Tyrrell J, Huikari V, Christie JT, Cavadino A, Bakker R, et al. (2012) Genetic variation in the 15q25 nicotinic acetylcholine receptor gene cluster (CHRNA5-CHRNA3-CHRNB4) interacts with maternal self-reported smoking status during pregnancy to influence birth weight. Hum Mol Genet 21: 5344-5358.
42. Ware JJ, Timpson N, Davey Smith G, Munafo MR (2014) A recall-by-genotype study of CHRNA5-A3-B4 genotype, cotinine and smoking topography: study protocol. BMC Med Genet 15: 13.
43. Davey Smith G (2011) Use of genetic markers and gene-diet interactions for interrogating population-level causal influences of diet on health. Genes Nutr 6: 27-43.
44. Cole SR, Platt RW, Schisterman EF, Chu H, Westreich D, et al. (2010) Illustrating bias due to conditioning on a collider. Int J Epidemiol 39: 417-420.