Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling

BMC Genomics

Volumn 15, Issue 1, 2014, Pages

  Zhao, Wei ^a,b   He, Xiaping ^a,b   Hoadley, Katherine A ^a,b   Parker, Joel S ^a,b   Hayes, David N ^a,b   Perou, Charles M ^a,b  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

^b UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

Author keywords

FFPE; Gene expression; Microarray; Ribo zero; RNA depletion; RNA sequencing

Indexed keywords

MESSENGER RNA; POLYADENYLATED RNA; RIBOSOME RNA; TRANSCRIPTOME; PARAFFIN; POLYADENYLIC ACID; RNA;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; CLINICAL ARTICLE; DNA MICROARRAY; DNA SEQUENCE; EXON; GENE EXPRESSION PROFILING; GENE MAPPING; GENE SEQUENCE; GENETIC VARIABILITY; HUMAN; HUMAN TISSUE; INTRON; MOLECULAR LIBRARY; REPRODUCIBILITY; RNA SEQUENCE; SEQUENCE ALIGNMENT; BREAST TUMOR; CLASSIFICATION; FEMALE; GENETICS; METABOLISM; MOLECULAR GENETICS; PROCEDURES; SEQUENCE ANALYSIS; TISSUE FIXATION;

BREAST NEOPLASMS; FEMALE; GENE EXPRESSION PROFILING; HUMANS; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PARAFFIN EMBEDDING; POLY A; REPRODUCIBILITY OF RESULTS; RNA; RNA, MESSENGER; RNA, RIBOSOMAL; SEQUENCE ANALYSIS, RNA; TISSUE FIXATION;

EID: 84904730587     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-419     Document Type: Article

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