MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery

Nucleic Acids Research

Volumn 38, Issue 18, 2010, Pages

  Wang, Kai ^a   Singh, Darshan ^b   Zeng, Zheng ^a   Coleman, Stephen J ^c   Huang, Yan ^a   Savich, Gleb L ^d   He, Xiaping ^d   Mieczkowski, Piotr ^d   Grimm, Sara A ^d   Perou, Charles M ^d   MacLeod, James N ^c   Chiang, Derek Y ^d   Prins, Jan F ^b   Liu, Jinze ^a  

^a UNIVERSITY OF KENTUCKY   (United States)

^b Brooks Computer Science Building   (United States)

^c UNIVERSITY OF KENTUCKY   (United States)

^d UNIVERSITY OF NORTH CAROLINA SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA;

ACCURACY; ALGORITHM; ALTERNATIVE RNA SPLICING; ARTICLE; BREAST CANCER; COMPUTER PROGRAM; CONTROLLED STUDY; GENE MAPPING; GENOME SIZE; INTERNET; INTRON; PRIORITY JOURNAL; RNA SEQUENCE; RNA SPLICING; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SIMULATION; STRUCTURAL BIOINFORMATICS; BREAST TUMOR; EVALUATION; FEMALE; GENE EXPRESSION PROFILING; GENETICS; HUMAN; SEQUENCE ANALYSIS;

ALGORITHMS; ALTERNATIVE SPLICING; BREAST NEOPLASMS; FEMALE; GENE EXPRESSION PROFILING; HUMANS; RNA SPLICE SITES; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EID: 78649345104     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq622     Document Type: Article

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