-
1
-
-
0035336676
-
Activation of rhodopsin: New insights from structural and biochemical studies
-
DOI 10.1016/S0968-0004(01)01799-6, PII S0968000401017996
-
Okada T, Ernst OP, Palczewski K, Hofmann KP (2001) Activation of rhodopsin: New insights from structural and biochemical studies. Trends Biochem Sci 26(5):318-324. (Pubitemid 32436382)
-
(2001)
Trends in Biochemical Sciences
, vol.26
, Issue.5
, pp. 318-324
-
-
Okada, T.1
Ernst, O.P.2
Palczewski, K.3
Hofmann, K.P.4
-
2
-
-
6344248639
-
Structure of bovine rhodopsin in a trigonal crystal form
-
DOI 10.1016/j.jmb.2004.08.090, PII S0022283604010903
-
Li J, Edwards PC, Burghammer M, Villa C, Schertler GF (2004) Structure of bovine rhodopsin in a trigonal crystal form. J Mol Biol 343(5):1409-1438. (Pubitemid 39387834)
-
(2004)
Journal of Molecular Biology
, vol.343
, Issue.5
, pp. 1409-1438
-
-
Li, J.1
Edwards, P.C.2
Burghammer, M.3
Villa, C.4
Schertler, G.F.X.5
-
3
-
-
0034784920
-
Rhodopsin: Structural basis of molecular physiology
-
Menon ST, Han M, Sakmar TP (2001) Rhodopsin: Structural basis of molecular physiology. Physiol Rev 81(4):1659-1688. (Pubitemid 32947780)
-
(2001)
Physiological Reviews
, vol.81
, Issue.4
, pp. 1659-1688
-
-
Menon, S.T.1
Han, M.2
Sakmar, T.P.3
-
4
-
-
0021646399
-
The photocurrent, noise and spectral sensitivity of rods of the monkey Macaca fascicularis
-
Baylor DA, Nunn BJ, Schnapf JL (1984) The photocurrent, noise and spectral sensitivity of rods of the monkey Macaca fascicularis. J Physiol 357(Dec):575-607. (Pubitemid 15175361)
-
(1984)
Journal of Physiology
, vol.357
, pp. 575-607
-
-
Baylor, D.A.1
Nunn, B.J.2
Schnapf, J.L.3
-
5
-
-
0019225828
-
Two components of electrical dark noise in toad retinal rod outer segments
-
Baylor DA, Matthews G, Yau KW (1980) Two components of electrical dark noise in toad retinal rod outer segments. J Physiol 309(Dec):591-621. (Pubitemid 11199961)
-
(1980)
Journal of Physiology
, vol.309
, pp. 591-621
-
-
Baylor, D.A.1
Matthews, G.2
Yau, K.W.3
-
6
-
-
0027428727
-
On the molecular origin of photoreceptor noise
-
DOI 10.1038/366064a0
-
Barlow RB, Birge RR, Kaplan E, Tallent JR (1993) On the molecular origin of photoreceptor noise. Nature 366(6450):64-66. (Pubitemid 23345236)
-
(1993)
Nature
, vol.366
, Issue.6450
, pp. 64-66
-
-
Barlow, R.B.1
Birge, R.R.2
Kaplan, E.3
Tallent, J.R.4
-
7
-
-
0018567294
-
Energy uptake in the first step of visual excitation
-
Cooper A (1979) Energy uptake in the first step of visual excitation. Nature 282(5738):531-533.
-
(1979)
Nature
, vol.282
, Issue.5738
, pp. 531-533
-
-
Cooper, A.1
-
8
-
-
11144247319
-
QM/MM study of energy storage and molecular rearrangements due to the primary event in vision
-
DOI 10.1529/biophysj.104.048264
-
Gascon JA, Batista VS (2004) QM/MM study of energy storage and molecular rearrangements due to the primary event in vision. Biophys J 87(5):2931-2941. (Pubitemid 40468554)
-
(2004)
Biophysical Journal
, vol.87
, Issue.5
, pp. 2931-2941
-
-
Gascon, J.A.1
Batista, V.S.2
-
9
-
-
25844515222
-
1,2-Diacyl-phosphatidylcholine flip-flop measured directly by sum-frequency vibrational spectroscopy
-
DOI 10.1529/biophysj.105.065672
-
Liu J, Conboy JC (2005) 1,2-diacyl-phosphatidylcholine flip-flop measured directly by sum-frequency vibrational spectroscopy. Biophys J 89(4):2522-2532. (Pubitemid 41401040)
-
(2005)
Biophysical Journal
, vol.89
, Issue.4
, pp. 2522-2532
-
-
Liu, J.1
Conboy, J.C.2
-
10
-
-
0008882006
-
The thermal stability of rhodopsin and opsin
-
Hubbard R (1958) The thermal stability of rhodopsin and opsin. J Gen Physiol 42(2):259-280.
-
(1958)
J Gen Physiol
, vol.42
, Issue.2
, pp. 259-280
-
-
Hubbard, R.1
-
11
-
-
11244264401
-
Role of the retinal hydrogen bond network in rhodopsin Schiff base stability and hydrolysis
-
DOI 10.1074/jbc.M408766200
-
Janz JM, Farrens DL (2004) Role of the retinal hydrogen bond network in rhodopsin Schiff base stability and hydrolysis. J Biol Chem 279(53):55886-55894. (Pubitemid 40066596)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.53
, pp. 55886-55894
-
-
Janz, J.M.1
Farrens, D.L.2
-
12
-
-
80055099919
-
Chemical kinetic analysis of thermal decay of rhodopsin reveals unusual energetics of thermal isomerization and hydrolysis of Schiff base
-
Liu J, Liu MY, Fu L, Zhu GA, Yan EC (2011) Chemical kinetic analysis of thermal decay of rhodopsin reveals unusual energetics of thermal isomerization and hydrolysis of Schiff base. J Biol Chem 286(44):38408-38416.
-
(2011)
J Biol Chem
, vol.286
, Issue.44
, pp. 38408-38416
-
-
Liu, J.1
Liu, M.Y.2
Fu, L.3
Zhu, G.A.4
Yan, E.C.5
-
13
-
-
79960999648
-
Thermal properties of rhodopsin: Insight into the molecular mechanism of dim-light vision
-
Liu J, et al. (2011) Thermal properties of rhodopsin: Insight into the molecular mechanism of dim-light vision. J Biol Chem 286(31):27622-27629.
-
(2011)
J Biol Chem
, vol.286
, Issue.31
, pp. 27622-27629
-
-
Liu, J.1
-
14
-
-
0003651195
-
-
Prentice Hall, Upper Saddle River, NJ, 2nd Ed.
-
Steinfeld JI, Francisco JS, Hase WL (1999) Chemical Kinetics and Dynamics (Prentice Hall, Upper Saddle River, NJ), 2nd Ed.
-
(1999)
Chemical Kinetics and Dynamics
-
-
Steinfeld, J.I.1
Francisco, J.S.2
Hase, W.L.3
-
15
-
-
0001585996
-
Influence of surface phase-transitions on desorption-kinetics: The compensation effect
-
Estrup PJ, Greene EF, Cardillo MJ, Tully JC (1986) Influence of surface phase-transitions on desorption-kinetics: The compensation effect. J Phys Chem-Us 90(17):4099-4104.
-
(1986)
J Phys Chem-Us
, vol.90
, Issue.17
, pp. 4099-4104
-
-
Estrup, P.J.1
Greene, E.F.2
Cardillo, M.J.3
Tully, J.C.4
-
16
-
-
0025780833
-
Differential scanning calorimetry of bovine rhodopsin in rod-outer-segment disk membranes
-
Khan SMA, Bolen W, Hargrave PA, Santoro MM, McDowell JH (1991) Differential scanning calorimetry of bovine rhodopsin in rod-outer-segment disk membranes. Eur J Biochem 200(1):53-59.
-
(1991)
Eur J Biochem
, vol.200
, Issue.1
, pp. 53-59
-
-
Khan, S.M.A.1
Bolen, W.2
Hargrave, P.A.3
Santoro, M.M.4
McDowell, J.H.5
-
17
-
-
4344581120
-
The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure
-
DOI 10.1016/j.jmb.2004.07.044, PII S0022283604008733
-
Okada T, et al. (2004) The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure. J Mol Biol 342(2):571-583. (Pubitemid 39149759)
-
(2004)
Journal of Molecular Biology
, vol.342
, Issue.2
, pp. 571-583
-
-
Okada, T.1
Sugihara, M.2
Bondar, A.-N.3
Elstner, M.4
Entel, P.5
Buss, V.6
-
18
-
-
0037197848
-
Functional role of internal water molecules in rhodopsin revealed by x-ray crystallography
-
DOI 10.1073/pnas.082666399
-
Okada T, et al. (2002) Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography. Proc Natl Acad Sci USA 99(9):5982-5987. (Pubitemid 34493251)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.9
, pp. 5982-5987
-
-
Okada, T.1
Fujiyoshi, Y.2
Silow, M.3
Navarro, J.4
Landau, E.M.5
Shichida, Y.6
-
19
-
-
70149112575
-
Structural waters define a functional channel mediating activation of the GPCR, rhodopsin
-
Angel TE, Gupta S, Jastrzebska B, Palczewski K, Chance MR (2009) Structural waters define a functional channel mediating activation of the GPCR, rhodopsin. Proc Natl Acad Sci USA 106(34):14367-14372.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.34
, pp. 14367-14372
-
-
Angel, T.E.1
Gupta, S.2
Jastrzebska, B.3
Palczewski, K.4
Chance, M.R.5
-
20
-
-
67649628230
-
Thermal decay of rhodopsin: Role of hydrogen bonds in thermal isomerization of 11-cis retinal in the binding site and hydrolysis of protonated Schiff base
-
Liu J, et al. (2009) Thermal decay of rhodopsin: Role of hydrogen bonds in thermal isomerization of 11-cis retinal in the binding site and hydrolysis of protonated Schiff base. J Am Chem Soc 131(25):8750-8751.
-
(2009)
J Am Chem Soc
, vol.131
, Issue.25
, pp. 8750-8751
-
-
Liu, J.1
-
21
-
-
79953895517
-
QM/MM study of the structure, energy storage, and origin of the bathochromic shift in vertebrate and invertebrate bathorhodopsins
-
Sekharan S, Morokuma K (2011) QM/MM study of the structure, energy storage, and origin of the bathochromic shift in vertebrate and invertebrate bathorhodopsins. J Am Chem Soc 133(13):4734-4737.
-
(2011)
J Am Chem Soc
, vol.133
, Issue.13
, pp. 4734-4737
-
-
Sekharan, S.1
Morokuma, K.2
-
22
-
-
78449261063
-
QM/MM study of dehydro and dihydro β-ionone retinal analogues in squid and bovine rhodopsins: Implications for vision in salamander rhodopsin
-
Sekharan S, Altun A, Morokuma K (2010) QM/MM study of dehydro and dihydro β-ionone retinal analogues in squid and bovine rhodopsins: Implications for vision in salamander rhodopsin. J Am Chem Soc 132(45):15856-15859.
-
(2010)
J Am Chem Soc
, vol.132
, Issue.45
, pp. 15856-15859
-
-
Sekharan, S.1
Altun, A.2
Morokuma, K.3
-
23
-
-
81855199858
-
Why 11-cis-retinal? Why not 7-cis-, 9-cis-, or 13-cis-retinal in the eye?
-
Sekharan S, Morokuma K (2011) Why 11-cis-retinal? Why not 7-cis-, 9-cis-, or 13-cis-retinal in the eye? J Am Chem Soc 133(47):19052-19055.
-
(2011)
J Am Chem Soc
, vol.133
, Issue.47
, pp. 19052-19055
-
-
Sekharan, S.1
Morokuma, K.2
-
24
-
-
84863477159
-
Color vision: "OH-site" rule for seeing red and green
-
Sekharan S, Katayama K, Kandori H, Morokuma K (2012) Color vision: "OH-site" rule for seeing red and green. J Am Chem Soc 134(25):10706-10712.
-
(2012)
J Am Chem Soc
, vol.134
, Issue.25
, pp. 10706-10712
-
-
Sekharan, S.1
Katayama, K.2
Kandori, H.3
Morokuma, K.4
-
25
-
-
84891296919
-
Spectral tuning of ultraviolet cone pigments: An interhelical lock mechanism
-
Sekharan S, et al. (2013) Spectral tuning of ultraviolet cone pigments: An interhelical lock mechanism. J Am Chem Soc 135(51):19064-19067.
-
(2013)
J Am Chem Soc
, vol.135
, Issue.51
, pp. 19064-19067
-
-
Sekharan, S.1
-
26
-
-
84870658625
-
The active site of melanopsin: The biological clock photoreceptor
-
Sekharan S, Wei JN, Batista VS (2012) The active site of melanopsin: The biological clock photoreceptor. J Am Chem Soc 134(48):19536-19539.
-
(2012)
J Am Chem Soc
, vol.134
, Issue.48
, pp. 19536-19539
-
-
Sekharan, S.1
Wei, J.N.2
Batista, V.S.3
-
27
-
-
84879745753
-
Spectral tuning in halorhodopsin: The chloride pump photoreceptor
-
Pal R, Sekharan S, Batista VS (2013) Spectral tuning in halorhodopsin: The chloride pump photoreceptor. J Am Chem Soc 135(26):9624-9627.
-
(2013)
J Am Chem Soc
, vol.135
, Issue.26
, pp. 9624-9627
-
-
Pal, R.1
Sekharan, S.2
Batista, V.S.3
-
28
-
-
0021196718
-
On the amine-catalyzed isomerization of vitamin-a aldehydes
-
Lukton D, Rando RR (1984) On the amine-catalyzed isomerization of vitamin-a aldehydes. J Am Chem Soc 106(1):258-259.
-
(1984)
J Am Chem Soc
, vol.106
, Issue.1
, pp. 258-259
-
-
Lukton, D.1
Rando, R.R.2
-
29
-
-
33750947173
-
Retinitis pigmentosa
-
DOI 10.1016/S0140-6736(06)69740-7, PII S0140673606697407
-
Hartong DT, Berson EL, Dryja TP (2006) Retinitis pigmentosa. Lancet 368(9549):1795-1809. (Pubitemid 44739028)
-
(2006)
Lancet
, vol.368
, Issue.9549
, pp. 1795-1809
-
-
Hartong, D.T.1
Berson, E.L.2
Dryja, T.P.3
-
30
-
-
84879056670
-
Thermal stability of rhodopsin and progression of retinitis pigmentosa: Comparison of S186W and D190N rhodopsin mutants
-
Liu MY, et al. (2013) Thermal stability of rhodopsin and progression of retinitis pigmentosa: Comparison of S186W and D190N rhodopsin mutants. J Biol Chem 288(24):17698-17712.
-
(2013)
J Biol Chem
, vol.288
, Issue.24
, pp. 17698-17712
-
-
Liu, M.Y.1
-
31
-
-
0034002482
-
Molecular evolution of vertebrate visual pigments
-
Yokoyama S (2000) Molecular evolution of vertebrate visual pigments. Prog Retin Eye Res 19(4):385-419.
-
(2000)
Prog Retin Eye Res
, vol.19
, Issue.4
, pp. 385-419
-
-
Yokoyama, S.1
-
32
-
-
34547264066
-
Photointermediates of the rhodopsin S186A mutant as a probe of the hydrogen-bond network in the chromophore pocket and the mechanism of counterion switch
-
DOI 10.1021/jp067172o
-
Yan ECY, et al. (2007) Photointermediates of the rhodopsin S186A mutant as a probe of the hydrogen-bond network in the chromophore pocket and the mechanism of counterion switch. J Phys Chem C 111(25):8843-8848. (Pubitemid 47152593)
-
(2007)
Journal of Physical Chemistry C
, vol.111
, Issue.25
, pp. 8843-8848
-
-
Yan, E.C.Y.1
Epps, J.2
Lewis, J.W.3
Szundi, I.4
Bhagat, A.5
Sakmar, T.P.6
Kliger, D.S.7
-
33
-
-
0014027427
-
The stereoisomerization of 11-cis-retinal
-
Hubbard R (1966) The stereoisomerization of 11-cis-retinal. J Biol Chem 241(8):1814-1818.
-
(1966)
J Biol Chem
, vol.241
, Issue.8
, pp. 1814-1818
-
-
Hubbard, R.1
-
34
-
-
0035930520
-
Isomerization of 11-cis-retinoids to all-trans-retinoids in vitro and in vivo
-
McBee JK, Van Hooser JP, Jang F, Palczewski K (2001) Isomerization of 11-cis-retinoids to all-trans-retinoids in vitro and in vivo. J Biol Chem 276(51):48483-48493.
-
(2001)
J Biol Chem
, vol.276
, Issue.51
, pp. 48483-48493
-
-
McBee, J.K.1
Van Hooser, J.P.2
Jang, F.3
Palczewski, K.4
|