Dematiopleospora mariae gen. sp. nov., from Ononis Spinosa in Italy

Cryptogamie, Mycologie

Volumn 35, Issue 2, 2014, Pages 105-117

  Wanasinghe, Dhanushka N ^a,b,c   Jones, E B Gareth ^d   Camporesi, Erio ^e,f,g   Boonmee, Saranyaphat ^c   Karunarathna, Samantha C ^a,b,c   Thines, Marco ^h   Mortimer, Peter E ^a,b   Xu, Jianchu ^a   Hyde, Kevin D ^a,b,c  

^a East and Central Asia Regional Office   (China)

^b KUNMING INSTITUTE OF BOTANY   (China)

^c MAE FAH LUANG UNIVERSITY   (Thailand)

^d KING SAUD UNIVERSITY   (Saudi Arabia)

^e AMB Gruppo Micologico Forlivese Antonio Cicognani   (Italy)

^f AMB Circolo Micologico 'Giovanni Carini'   (Italy)

^g Società per Gli Studi Naturalistici della Romagna   (Italy)

^h BIODIVERSITY AND CLIMATE RESEARCH CENTRE BIK F   (Germany)

Author keywords

LSU; new genus; new species; Phaeosphaeriaceae; SSU

Indexed keywords

EID: 84904510306     PISSN: 01811584     EISSN: None     Source Type: Journal    
DOI: 10.7872/crym.v35.iss2.2014.105     Document Type: Article

References (58)

1. ARIYAWANSA H., MAHARACHCHIKUMBURA S.S.N, KARUNARATHNE S.C., CHUKEATIROTE E., BAHKALI A.H., KANG J.K., BHAT D.J., HYDE K.D., 2013 - Deniquelata barringtoniae gen. et sp. nov., associated with leaf spots of Barr ingtonia asiatica. Phytotaxa 105: 11-20.
2. BARR M.E., 1979 - A classification of Loculoascomycetes. Mycologia 71: 935-957.
3. BARR M.E., 1987 - Prodomus to class Loculoascomycetes. Publ. by theauthor, Amherst, Massachusetts.
4. BOEHM E., MUGAMBI G., MILLER A., HUHNDORF S., MARINCOWITZ S., SPATAFORA J., (2009 ) A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology 64: 1-15S10.
5. BOEHM E.W.A., MUGAMBI G., MILLER A.N., HUHNDORF S., MARINCOWITZ S., SCHOCH C.L., SPATAFORA J.W., 2009 - A phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae & Gloniaceae with keys to world species. Studies in Mycology 64: 49-83.
6. BOONMEE S., ZHANG Y., CHOMNUNTI P., CHUKEATIROTE E., TSUI C.K.M., BAHKALI A.H., HYDE K.D., 2011 - Revision of lignicolous Tubeufiaceae based on morphological reexamination and phylogenetic analysis. Fungal Diversity 51: 63-102.
7. BOONMEE S., KO-KO T.W., CHUKEATIROTE E., HYDE K.D., CHEN H., CAI L., MCKENZIE E.H.C., JONES E.B.G., KOD SUEB R., HASSAN B.A., 2012 - Two new Kirschsteiniothelia species with Dendryphiopsis anamorphs cluster in Kirschsteiniotheliaceae fam. nov. Mycologia 104: 698-714.
8. CHOMNUNTI P., SCHOCH C.L., AGUIRRE-HUDSON B., KO-KO T.W., HONGSANAN S., JONES E.B.G., KODSUB R., CHUKEATIROTE E., BAHKALI A.H., HYDE K.D., 2011 - Capnodiaceae. Fungal Diversity 51: 103-134.
9. CHOMNUNTI P., HONGSANAN S., HUDSON B.A., TIAN Q., PER-OH D., DHAMI M.K., ALIAS A.S., XU J., LIU X., STADLER M., HYDE K.D., 2014 - The Sooty Moulds. Fungal Diversity 66,1-36.
10. DOILOM M., LIU J.K., JAKLITSCH W.M., AR IYAWANSA H., WIJAYAWARDENE N.N., CHUKEATIROTE E., ZHANG M., MCKENZIE E.H.C., GEML J., VOGLMAYR H., HYDE K.D., 2013 - An outline of the family Cucurbitariaceae. Sydowia 65: 167-192.
11. ERIKSSON O.E., 1981 - The families of bitunicate Ascomycetes. Opera Botanica. 60: 1-209.
12. GRUYTER J.D. WOUDENBERG J.H.C. AVESKAMP M.M. VERKLEY G.J.M. GROENEWALD J.Z. CROUS P.W.2013 - Redisposi tion of phoma-like anamorphs in Pleosporales. Studies in Mycology. 75,1-36.
13. HALL T.A., 1999 - BioEdit: a user-friendly biological sequence alignment editor and analysis programfor Windows 95/98/NT. In: Nucleic Acids Symposium Series 41: 95-98.
14. HUELSENBECK J.P. & RONQUIST F., 2001 - MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17(8): 754-755. (Pubitemid 32851390)
15. KATOH K., STANDLEY K., 2013 - MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability. Molecular Biology and Evolution http://mbe.oxfordjournals.org/by guest on June 22, 2013.
16. HYDE K.D., JONES E.B.G., LIU J.K, ARIYAWANSA H., BOEHM E., BOONMEE S., BRAUN U., CHOMNUNTI P., CROUS P.W., DAI D.Q., DIEDERICH P., DISSANAYAKE A., DOILOM M., DOVERI F., HONGSANAN S., JAYAWARDENA R., LAWREY J.D., LI Y.M., LIU Y.X., LÜ CKING R., MONKAI J., MUGGIA L., NELSEN M.P., PANG K.L., PHOOKAMSAK R., SENANAYAKE I.C., SHEARER C.A., SUETRONG S., TANAKA K., THAMBUGALA K.M., WIJAYAWARDENE N.N., WIKEE S., WU H.X., ZHANG Y., AGUIRREHUDSON B., ALIAS S.A., APTROOT A., BAHKALI A., BEZERRA J.L., BHAT D.J., CAMPORESI E., CHUKEATIROTE E., GUEIDAN C., HAWKSWORTH D.L., HIRAYAMA K. , HOOG S.D., KANG J.C., KNUDSEN K., LI W.J., LI X.H., LIU Z.Y., MAPOOK A., MCKENZIE E.H.C., MILLER A.N., MORTIMER P.E., PHILLIPS A.J.L., RAJA H.A, SCHEUER C., SCHUMM F., TAYLOR J.E., TIAN Q., TIBPROMMA S., WANASINGHE D.N., WANG Y., XU J.C., YACHAROEN S., YAN J.Y., ZHANG M., 2013 - Families of Dothideomycetes. Fungal Diversity 63: 1-313.
17. KOHLMEYER J., VOLKMANN-KOHLMEYER B., 1993 - Atrotorquata and Loratospora: new ascomycete genera on Juncus roemerianus. Systema Ascomycetum 12: 7-22.
18. KIRK P.M., CANNON P.F., MINTER D.W., STALPERS J.A., 2008 - Ainsworth & Bisby's Dictionary of the Fungi, 10th edn. CABI, Wallingford, UK, pp. 485.
19. LIU J.K., PHOOKAMSAK R., DOILOM M., WIKI S., MEI L.Y., ARIYAWANSA H.A., BOONMEE S., CHOMNUNTI P., DAI D.Q., BHAT D.J., ROM ERO A.I., XHUANG W.Y., MONKAI J., JONES E.B.G,. CHUKEATIROTE E., KO-KO T.W., ZHOA Y.C., WANG Y., HYDE K.D., 2012 - Towards a natural classification of Botryosphaeriales. Fungal Diversity 57: 149-210.
20. LIU J.K., PHOOKAMSAK R., JONES E.B.G., ZHANG Y., KO-KO T.W., HU H.L., BOONMEE S., DOILOM M., CHUKEATIROTE E., BAHKALI A.H., WANG Y., HYDE K.D., 2011 - Astrosphaeriella is polyphyletic, with spe cies in Fissuroma gen. nov., and Neoastrosphaeriella gen. nov. Fungal Diversity 51: 135-154.
21. LUTTRELL E.S., 1955 - The ascostromatic Ascomycetes. Mycologia 47: 511-532.
22. LUTTRELL E.S ., 1973 - Loculoascomycetes. In: Ainsworth GC Sparrow FK Sussman AS (eds) The fungi, an advanced treatise, a taxonomic review with keys: ascomycetes and fungi imperfecti. Academic, London, pp. 135-219.
23. MANAMGODA D. S., CAI L., MCKENZIE E.H.C., CROUS P.W., MADRID H., CHUKEATIROTE E., SHIVAS R.G., TAN Y.P., HYDE K.D., 2012 - A Phylogenetic and taxonomic re-evaluation of the Bipolaris, Cochliobolus, Curvularia Complex. Fungal D iversity 56: 131-144.
24. MUGAMBI G.K., HUHNDORF S.M., 2009 - Molecular phylogenetics of Pleosporales: Melanommataceae and Lophiostomataceae recircumscribed (Plesporomycetidae, Dothideomycetes, Ascomycota). Studies in Mycology 64: 103-121.
25. NANNFELDT J.A., 1932 - Studien uber die morphologie und systematik der nicht-lichenisierten, inoperkulaten discomyceten (Germany). Nova Acta Regiae Societatis Scientiarum Uppsaliensis IV 8: 1-368
26. NELSEN M.P., LÜ CKING R., GRUBE M., MBATCHOU J.S., MUGGIA L., RIVAS-PLATA E., LUMBSCH H.T., 2009 - Unravelling the phylogenetic relationships of lichenised fungi in Dothideomyceta. Stu dies in Mycology 64: 135-144.
27. NELSEN M.P., LÜCKING R., MBATCHOU J.S., ANDREW C.J., SPIELMANN A.A., LUMBSCH H.T., 2011 - New insights into relationships of lichen-forming Dothideomycetes. Fungal Diversity 51: 155-162.
28. PAGE R.D.M., 1996 - Tree View: an application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357-358.
29. PHOOKAMSAK R., LIU J.K., MANAMGODA D.S., CHUKEATIROTE E., MCKENZIE E.H.C., HYDE K.D., 2014 - The sexual state of Setophoma . Phytotaxa (in press
30. PHOOKAMSAK R., LIU J.K., CHUKEATIROTE E., MCKENZIE E.H.C., HYDE K.D., 2013 - Phylogeny and morphology of Leptosphaerulina saccharicola sp. nov. and Pleosphaerulina oryzae and relationships with Pithomyces. Cryptogamie Mycologie 34: 303-319.
31. QUAEDVLIEG W., VERKLEY G.J., SHIN H.D., BARRETO R.W., ALFENAS A.C., SWART W.J., GROENEWALD J.Z., CROUS P.W., 2013 - Sizing up Septoria. Studies in Mycology 75: 307-390.
32. RAMALEY AW, BARR M.E., 1995 - New dictyosporous species from leaves of Agavaceae. Mycotaxon 54:75-90.
33. RANNALA B. & YANG Z., 1996 - Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311. (Pubitemid 26315133)
34. REHNER S. 2001, Primers for Elongation Factor 1-EF1- http://ocid.NACSE. ORG/research/deephyphae/EF1primer.pdf.
35. RUIBAL C., GUEIDA N C., SELBMANN L., GORBUSHINA A.A., CROUS P.W., GROENEWALD J.Z., MUGGIA L., GRUBE M., ISOLA D., SCHOCH C.L., STALEY J.T., LUTZONI F., DE HOOG G.S., 2009 - Phylogeny of rock-inhabiting fungi related to D othideomycetes. Studies in Mycology 64: 123-133.
36. SCHOCH C.L., CROUS P.W., GROENEWALD J.Z., BOEHM E.W.A., BURGESS T.I., DE GRUYTER J., DE HOOG G.S., DIXON L.J., GRUBE M., GUEIDAN C., HA RADA Y., HATAKEYAMA S., HIRAYAMA K., HOSOYA T., HUHNDORF S.M., HYDE K.D., JONES E.B.G., KOHLMEYER J., KRUYS Å., LI Y.M., LÜCKING R., LUMBSCH H.T., MARVANOVÁ L., MBATCHOU J.S., MCVAY A.H., MILLER A.N., MUGAMBI G.K., MUGGIA L., NE LSEN M.P., NELSON P., OWENSBY C.A., PHILLIPS A.J.L., PHONGPAICHIT S., POINTING S.B., PUJADE-RENAUD V., RAJA H.A., RIVAS PLATA E., ROBBERTSE B., RUIBAL C., SAKAYAROJ J., SANO T., SELBMANN L., SHEARER C.A., SHIROUZU T., SLIPPERS B., SUETRONG S., TANAKA K., VOLKMANN-KOHLMEYER B., WINGFIELD M.J., WOOD A.R., WOUDENBERG J.H.C., YONEZAWA H., ZHANG Y., SPATAFORA J.W., 2009 a - A class-wide phylogenetic assessment of Dothideomycetes. Studies in Mycology 64: 1-15.
37. SCHOCH C.L., SUNG G.H., LÓPEZ-GIRÁ LDEZ F., TOWNSEND J.P., MIADLIKOWSKA J., HOFSTETTER V., ROBBERTSE B., MATHENY P.B., KAUFF F.,WANG Z., GUEIDAN C., ANDRIE R.M., TRIPPE K., CIUFETTI L.M., WYNNS A., FRAKER E., HODKINSON B.P., BONITO G., GROENEWALD J.Z., ARZANLOU M., DE HOOG G.S., CROUS P.W., HEWITT D., PFISTER D.H., PETERSON K., GRYZENHOUT M., WINGFIELD M.J., APTROOT A., SUH S.O., BLACKWELL M., HILLIS D. M., GRIFFITH G.W., CASTLEBURY L.A., ROSSMAN A.Y., LUMBSCH H.T., LÜCKING R., BÜ DEL B., RAUHUT A., DIEDERICH P., ERTZ D., GEISER D.M., HOSAKA K., INDERBITZIN P., KOHLMEYER J., VOLKMANNKOHLMEYER B., MOSTERT L., O'DONNELL K., SIPMAN H., ROGERS J.D., SHOEMAKER R .A., SUGIYAMA J.,SUMMERBELL R.C., UNTEREINER W., JOHNSTON P.R., STENROOS S., ZUCCARO A., DYER P.S., CRITTENDEN P.D., COLE M.S., HANSEN K., TRAPPE J.M., YAHR R., LUTZONI F., SPATAFORA J.W., SCHOCH C.L. et al., 2009 b - The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Systematic Biology 58: 224-239.
38. SCHOCH C.L., SHOEMAKER R.A., SEIFERT K.A., HAMBLETON S., SPATAFO RA J.W., CROUS P.W., 2006 - A multigene phylogeny of the Dothideomycetes using four nuclear loci. Mycologia 98: 1041-1052. (Pubitemid 46683225)
39. SHEARER C.A., RAJA H.A., MILLER A.N., NELSON P., TANAKA K., HIRAYAM A K., MARVANOVA L., HYDE K.D., ZHANG Y., 2009 - The molecular phylogeny of freshwater Dothideomycetes. Studies in Mycology 64: 145-153.
40. SHOEMAKER R.A., 1984 - Canadian and some extralimital Nodulosphaeria and Entodesmium species. Canadian Journal of Botany 62: 2730-2753.
41. SHOEMAKER R.A. & BABCOCK C.E., 1989 - Phaeosphaeria. Canadian Journal of Botany 67: 1500-1599.
42. SILVESTRO, D. & MICHALAK I., 2012 - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity & Evolution 12: 335-337.
43. STAMATAKIS A., 2006 - RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. (Pubitemid 44642609)
44. STAMATAKIS A., HOOVER, P., ROUGEMONT, J., 2008 - A Rapid Bootstrap Algorithm for the RAxML Web Servers. Systematic Biology 57: 758-771.
45. SUETRONG S., SCHOCH C.L., SPATAFORA J.W., KOHLMEYER J., VOLKMANNKOHLMEYER B., SAKAYAROJ J., PHONGPAICHT S., TANAKA K., HAIRAYAMA K., JONES E.B.G., 2009 - Mole cular systematics of the marine Dothideomycetes. Studies in Mycology 64: 155-173.
46. SWOFFORD D.L., 2002 - PAUP: Phylogenetic Analysis Using parsimony. version 4.0 b10. Sinauer Associates, Sunderland, MA.
47. TANAKA K., HIRAYAMA K., YONEZAWA H., HATAKEYAMA S., HARADA Y., SANO T., SHIROUZU T., HOSOYA T., 2009 - Molecular taxonomy of bambusicolous fungi: Tetraplosphaeriaceae, a new pleosporalean family with Tetraploa-like anamorphs. Studies in Mycology 64: 175-209.
48. TELLE S., & THINES M., 2011 - Reclassification of an enigmatic downy mildew species on lovegrass (Eragrostis) to the new genus Eraphthora, with a key to the gene ra of the Peronosporaceae. Mycological Progress, doi: 10.1007/s11557-010-0735-9.
49. TELLE S., SHIVAS R.G., RYLEY M.J., THINES M., 2011 - Molecular phylogenetic analysis of Peronosclerospora (Oomycetes) reveals cryptic spe cies and genetically distinct species parasitic to maize. European Journal of Plant Pathology 130: 521-528.
50. THAMBUGALA K.M., CAMPORESI E, ARIYAWANSA H.A., PHOOKAMSAK R., LIU Z.Y., HYDE K.D., 2014 - Phylogeny and morphology of Phaeosphaeriopsis triseptata sp. nov., and Phaeosphaeriopsis glaucopunctata. Phytotaxa (in press
51. VILGALYS R. & HESTER M., 1990 - Rapid genetic identification and mapping of enzymatica lly amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. (Pubitemid 20236711)
52. WHITE T., BRUNS T., LEE S., TAYLOR J., 1990 - Amplification and direct sequencing of fungal ribosom al RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications 18: 315-322.
53. WIJAYAWARDENE D.N.N., CAMPORESI E., SONG Y., DAI D.Q., BHAT D.J., MCKENZIE E.H.C., CHUKEATIROTE E., MEL'NIK V.A., WANG Y., HYDE K.D., 2013a - Multi-gene analyses reveal taxonomic placement of Scolicosporium minkeviciusii in Phaeosphaeriaceae (Pleosporales) Cryptogamie, Mycologie, 34: 357-366.
54. WIJAYAWARDENE D .N.N., SONG Y., BHAT D.J., MCKENZIE E.H.C., CHUKEATIROTE E., WANG Y., HYDE K.D., 2013b - Wojnowicia viburni sp. nov. from China and its phylogenetic placement. Sydowia 65: 113-128.
55. ZHANG Y. CROUS P.W. SCHOCH C.L. HYDE K.D.2012 ? Pleosporales. Fungal Diversity, 52,1-225.
56. ZHANG Y., CROUS P.W., SCHOCH C.L., BAHKALI A.H., GUO L.D., HYDE K.D., 2011 - A molecular, morphological and ecological re-appraisal of Venturiales-A new order of Dothideomycetes. Fungal Diversity 51: 249-2 77.
57. ZHANG Y., SCHOCH C.L., FOURNIER J., CROUS P.W., DE GRUYTER J., WOUDENBERG J.H.C., HIRAYAMA K., TANAKA K., POINTING S.B., HYDE K.D., 2009 - Multilocus phylogeny of the Pleosporales: a taxonomi c, ecological and evolutionary reevaluation. Studies in Mycology 64: 85-102.
58. ZHAXYBAYEVA O. & GOGARTEN J.P., 2002 - Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools f or comparative genome analyses. BMC Genomics 3(1): 4.