New insight in the structural features of haloadaptation in α-amylases from halophilic Archaea following homology modeling strategy: Folded and stable conformation maintained through low hydrophobicity and highly negative charged surface

Journal of Computer-Aided Molecular Design

Volumn 28, Issue 7, 2014, Pages 721-734

  Zorgani, Mohamed Amine ^a,b   Patron, Kevin ^b   Desvaux, Mickaël ^a  

^a CEMAGREF   (France)

^b UNIVERSITÉ DE TOURS   (France)

Author keywords

Archaea; Haloadaptation; Halophile; Homology modeling; Stability; Amylase

Indexed keywords

HYDROPHOBICITY; IONIC STRENGTH; MICROORGANISMS;

ARCHAEON; CHARGED SURFACES; HALOADAPTATION; HALOPHILE; HALOPHILIC ARCHAEA; HOMOLOGY MODELING; HYDROPHOBIC INTERACTIONS; LOWER HYDROPHOBICITY; SALT BRIDGES; Α-AMYLASE;

AMYLASES;

AMYLASE; ASPARTIC ACID; SODIUM CHLORIDE;

ADAPTATION; AMINO ACID COMPOSITION; ARTICLE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; ENZYME CONFORMATION; ENZYME STABILITY; HALALKALICOCCUS JEOTGALI; HALOADAPTATION; HALOARCULA HISPANICA; HALOARCULA MARISMORTUI; HALOPHILIC ARCHAEON; HYDROPHOBICITY; NONHUMAN; PRIORITY JOURNAL; PROTEIN FOLDING; SEQUENCE ALIGNMENT; STRUCTURAL HOMOLOGY; STRUCTURE ANALYSIS; SURFACE CHARGE; AMINO ACID SEQUENCE; ARCHAEON; CHEMICAL PHENOMENA; CHEMICAL STRUCTURE; CHEMISTRY; ENZYMOLOGY; HALOARCULA; HALOBACTERIALES; PROTEIN CONFORMATION; PROTEIN SECONDARY STRUCTURE;

ALPHA-AMYLASES; AMINO ACID SEQUENCE; ARCHAEA; HALOARCULA; HALOBACTERIALES; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; STRUCTURAL HOMOLOGY, PROTEIN;

EID: 84904399997     PISSN: 0920654X     EISSN: 15734951     Source Type: Journal    
DOI: 10.1007/s10822-014-9754-y     Document Type: Article

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