-
1
-
-
80052197610
-
Phosphorylation of Serine 114 on Atg32 mediates mitophagy
-
Aoki, Y., Kanki, T., Hirota, Y., Kurihara, Y., Saigusa, T., Uchiumi, T. and Kang, D. (2011). Phosphorylation of Serine 114 on Atg32 mediates mitophagy. Mol. Biol. Cell 22, 3206-3217.
-
(2011)
Mol. Biol. Cell
, vol.22
, pp. 3206-3217
-
-
Aoki, Y.1
Kanki, T.2
Hirota, Y.3
Kurihara, Y.4
Saigusa, T.5
Uchiumi, T.6
Kang, D.7
-
2
-
-
39749128389
-
Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo
-
Unit 21.3
-
Aparicio, O., Geisberg, J. V., Sekinger, E., Yang, A., Moqtaderi, Z. and Struhl, K. (2005). Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo. Curr Protoc. Mol. Biol. 21, Unit 21.3.
-
(2005)
Curr Protoc. Mol. Biol
, vol.21
-
-
Aparicio, O.1
Geisberg, J.V.2
Sekinger, E.3
Yang, A.4
Moqtaderi, Z.5
Struhl, K.6
-
3
-
-
84863921487
-
Ume6 transcription factor is part of a signaling cascade that regulates autophagy
-
Bartholomew, C. R., Suzuki, T., Du, Z., Backues, S. K., Jin, M., Lynch-Day, M. A., Umekawa, M., Kamath, A., Zhao, M., Xie, Z. et al. (2012). Ume6 transcription factor is part of a signaling cascade that regulates autophagy. Proc. Natl. Acad. Sci. USA 109, 11206-11210.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 11206-11210
-
-
Bartholomew, C.R.1
Suzuki, T.2
Du, Z.3
Backues, S.K.4
Jin, M.5
Lynch-Day, M.A.6
Umekawa, M.7
Kamath, A.8
Zhao, M.9
Xie, Z.10
-
4
-
-
0003911464
-
Pichia Protocols
-
New York, NY: Springer
-
Cregg, J. M. (2007). Pichia Protocols. New York, NY: Springer.
-
(2007)
-
-
Cregg, J.M.1
-
5
-
-
84877579321
-
Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11
-
Farre, J. C., Burkenroad, A., Burnett, S. F. and Subramani, S. (2013). Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11. EMBO Rep. 14, 441-449.
-
(2013)
EMBO Rep.
, vol.14
, pp. 441-449
-
-
Farre, J.C.1
Burkenroad, A.2
Burnett, S.F.3
Subramani, S.4
-
6
-
-
0031865050
-
Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo
-
Kadosh, D. and Struhl, K. (1998). Targeted recruitment of the Sin3-Rpd3 histone deacetylase complex generates a highly localized domain of repressed chromatin in vivo. Mol. Cell. Biol. 18, 5121-5127.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5121-5127
-
-
Kadosh, D.1
Struhl, K.2
-
7
-
-
57749121573
-
Mitophagy in yeast occurs through a selective mechanism
-
Kanki, T. and Klionsky, D. J. (2008). Mitophagy in yeast occurs through a selective mechanism. J. Biol. Chem. 283, 32386-32393.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 32386-32393
-
-
Kanki, T.1
Klionsky, D.J.2
-
8
-
-
73449118235
-
Monitoring mitophagy in yeast: the Om45-GFP processing assay
-
Kanki, T., Kang, D. and Klionsky, D. J. (2009a). Monitoring mitophagy in yeast: the Om45-GFP processing assay. Autophagy 5, 1186-1189.
-
(2009)
Autophagy
, vol.5
, pp. 1186-1189
-
-
Kanki, T.1
Kang, D.2
Klionsky, D.J.3
-
9
-
-
67650264633
-
Atg32 is a mitochondrial protein that confers selectivity duringmitophagy
-
Kanki, T., Wang, K., Cao, Y., Baba, M. and Klionsky, D. J. (2009b). Atg32 is a mitochondrial protein that confers selectivity duringmitophagy. Dev. Cell 17, 98-109.
-
(2009)
Dev. Cell
, vol.17
, pp. 98-109
-
-
Kanki, T.1
Wang, K.2
Cao, Y.3
Baba, M.4
Klionsky, D.J.5
-
10
-
-
73949122199
-
A genomic screen for yeast mutants defective in selective mitochondria autophagy
-
Kanki, T.,Wang, K., Baba, M., Bartholomew, C.R., Lynch-Day, M. A., Du, Z.,Geng, J., Mao, K., Yang, Z.,Yen, W.L. et al. (2009c). A genomic screen for yeast mutants defective in selective mitochondria autophagy. Mol. Biol. Cell 20, 4730-4738.
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 4730-4738
-
-
Kanki, T.1
Wang, K.2
Baba, M.3
Bartholomew, C.R.4
Lynch-Day, M.A.5
Du, Z.6
Geng, J.7
Mao, K.8
Yang, Z.9
Yen, W.L.10
-
11
-
-
4644273585
-
Uth1p is involved in the autophagic degradation of mitochondria
-
Kissová, I., Deffieu, M., Manon, S. and Camougrand, N. (2004). Uth1p is involved in the autophagic degradation of mitochondria. J. Biol. Chem. 279, 39068-39074.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 39068-39074
-
-
Kissová, I.1
Deffieu, M.2
Manon, S.3
Camougrand, N.4
-
12
-
-
84856244072
-
Mitophagy plays an essential role in reducing mitochondrial production of reactive oxygen species and mutation of mitochondrial DNA by maintaining mitochondrial quantity and quality in yeast
-
Kurihara, Y., Kanki, T., Aoki, Y., Hirota, Y., Saigusa, T., Uchiumi, T. and Kang, D. (2012). Mitophagy plays an essential role in reducing mitochondrial production of reactive oxygen species and mutation of mitochondrial DNA by maintaining mitochondrial quantity and quality in yeast. J. Biol. Chem. 287, 3265-3272.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 3265-3272
-
-
Kurihara, Y.1
Kanki, T.2
Aoki, Y.3
Hirota, Y.4
Saigusa, T.5
Uchiumi, T.6
Kang, D.7
-
13
-
-
16844366524
-
Selective mitochondrial autophagy, or mitophagy, as a targeted defense against oxidative stress, mitochondrial dysfunction, and aging
-
Lemasters, J. J. (2005). Selective mitochondrial autophagy, or mitophagy, as a targeted defense against oxidative stress, mitochondrial dysfunction, and aging. Rejuvenation Res. 8, 3-5.
-
(2005)
Rejuvenation Res.
, vol.8
, pp. 3-5
-
-
Lemasters, J.J.1
-
14
-
-
0036163982
-
Paz2 and 13 other PAZ gene products regulate vacuolar engulfment of peroxisomes during micropexophagy
-
Mukaiyama, H., Oku,M., Baba, M., Samizo, T., Hammond, A. T., Glick, B. S., Kato, N. and Sakai, Y. (2002). Paz2 and 13 other PAZ gene products regulate vacuolar engulfment of peroxisomes during micropexophagy. Genes Cells 7, 75-90.
-
(2002)
Genes Cells
, vol.7
, pp. 75-90
-
-
Mukaiyama, H.1
Oku, M.2
Baba, M.3
Samizo, T.4
Hammond, A.T.5
Glick, B.S.6
Kato, N.7
Sakai, Y.8
-
15
-
-
67649467294
-
Dynamics and diversity in autophagy mechanisms: lessons from yeast
-
Nakatogawa, H., Suzuki, K., Kamada, Y. and Ohsumi, Y. (2009). Dynamics and diversity in autophagy mechanisms: lessons from yeast. Nat. Rev. Mol. Cell Biol. 10, 458-467.
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 458-467
-
-
Nakatogawa, H.1
Suzuki, K.2
Kamada, Y.3
Ohsumi, Y.4
-
16
-
-
58149314211
-
Parkin is recruited selectively to impaired mitochondria and promotes their autophagy
-
Narendra, D., Tanaka, A., Suen, D. F. and Youle, R. J. (2008). Parkin is recruited selectively to impaired mitochondria and promotes their autophagy. J. Cell Biol. 183, 795-803.
-
(2008)
J. Cell Biol.
, vol.183
, pp. 795-803
-
-
Narendra, D.1
Tanaka, A.2
Suen, D.F.3
Youle, R.J.4
-
17
-
-
75749156257
-
PINK1 is selectively stabilized on impaired mitochondria to activate Parkin
-
Narendra, D. P., Jin, S. M., Tanaka, A., Suen, D. F., Gautier, C. A., Shen, J., Cookson, M. R. and Youle, R. J. (2010). PINK1 is selectively stabilized on impaired mitochondria to activate Parkin. PLoS Biol. 8, e1000298.
-
(2010)
PLoS Biol.
, vol.8
-
-
Narendra, D.P.1
Jin, S.M.2
Tanaka, A.3
Suen, D.F.4
Gautier, C.A.5
Shen, J.6
Cookson, M.R.7
Youle, R.J.8
-
18
-
-
0032512636
-
Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast
-
Noda, T. and Ohsumi, Y. (1998). Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast. J. Biol. Chem. 273, 3963-3966.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 3963-3966
-
-
Noda, T.1
Ohsumi, Y.2
-
19
-
-
67650246357
-
Mitochondriaanchored receptor Atg32 mediates degradation of mitochondria via selective autophagy
-
Okamoto, K., Kondo-Okamoto, N. and Ohsumi, Y. (2009). Mitochondriaanchored receptor Atg32 mediates degradation of mitochondria via selective autophagy. Dev. Cell 17, 87-97.
-
(2009)
Dev. Cell
, vol.17
, pp. 87-97
-
-
Okamoto, K.1
Kondo-Okamoto, N.2
Ohsumi, Y.3
-
20
-
-
84877673019
-
Macromitophagy is a longevity assurance process that in chronologically aging yeast limited in calorie supply sustains functional mitochondria and maintains cellular lipid homeostasis
-
Richard, V. R., Leonov, A., Beach, A., Burstein, M. T., Koupaki, O., Gomez-Perez, A., Levy, S., Pluska, L., Mattie, S., Rafesh, R. et al. (2013). Macromitophagy is a longevity assurance process that in chronologically aging yeast limited in calorie supply sustains functional mitochondria and maintains cellular lipid homeostasis. Aging (Albany, NY) 5, 234-269.
-
(2013)
Aging (Albany, NY)
, vol.5
, pp. 234-269
-
-
Richard, V.R.1
Leonov, A.2
Beach, A.3
Burstein, M.T.4
Koupaki, O.5
Gomez-Perez, A.6
Levy, S.7
Pluska, L.8
Mattie, S.9
Rafesh, R.10
-
21
-
-
0032560117
-
Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3
-
Rundlett, S. E., Carmen, A. A., Suka, N., Turner, B. M. and Grunstein, M. (1998). Transcriptional repression by UME6 involves deacetylation of lysine 5 of histone H4 by RPD3. Nature 392, 831-835.
-
(1998)
Nature
, vol.392
, pp. 831-835
-
-
Rundlett, S.E.1
Carmen, A.A.2
Suka, N.3
Turner, B.M.4
Grunstein, M.5
-
22
-
-
0032482219
-
Peroxisome degradation by microautophagy in Pichia pastoris: identification of specific steps and morphological intermediates
-
Sakai, Y., Koller, A., Rangell, L. K., Keller, G. A. and Subramani, S. (1998). Peroxisome degradation by microautophagy in Pichia pastoris: identification of specific steps and morphological intermediates. J. Cell Biol. 141, 625-636.
-
(1998)
J. Cell Biol.
, vol.141
, pp. 625-636
-
-
Sakai, Y.1
Koller, A.2
Rangell, L.K.3
Keller, G.A.4
Subramani, S.5
-
23
-
-
84871002139
-
Selective autophagy in budding yeast
-
Suzuki, K. (2012). Selective autophagy in budding yeast. Cell Death Differ. 20, 43-48.
-
(2012)
Cell Death Differ.
, vol.20
, pp. 43-48
-
-
Suzuki, K.1
-
24
-
-
34247172582
-
Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival
-
Tal, R., Winter, G., Ecker, N., Klionsky, D. J. and Abeliovich, H. (2007). Aup1p, a yeast mitochondrial protein phosphatase homolog, is required for efficient stationary phase mitophagy and cell survival. J. Biol. Chem. 282, 5617-5624.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 5617-5624
-
-
Tal, R.1
Winter, G.2
Ecker, N.3
Klionsky, D.J.4
Abeliovich, H.5
-
25
-
-
84859741506
-
Pexophagy: the selective degradation of peroxisomes
-
Till, A., Lakhani, R., Burnett, S. F. and Subramani, S. (2012). Pexophagy: the selective degradation of peroxisomes. Int. J. Cell Biol. 2012, 512721.
-
(2012)
Int. J. Cell Biol.
, vol.2012
, pp. 512721
-
-
Till, A.1
Lakhani, R.2
Burnett, S.F.3
Subramani, S.4
-
26
-
-
38549110110
-
Fission and selective fusion govern mitochondrial segregation and elimination by autophagy
-
Twig, G., Elorza, A., Molina, A. J., Mohamed, H., Wikstrom, J. D., Walzer, G., Stiles, L., Haigh, S. E., Katz, S., Las, G. et al. (2008). Fission and selective fusion govern mitochondrial segregation and elimination by autophagy. EMBO J. 27, 433-446.
-
(2008)
EMBO J.
, vol.27
, pp. 433-446
-
-
Twig, G.1
Elorza, A.2
Molina, A.J.3
Mohamed, H.4
Wikstrom, J.D.5
Walzer, G.6
Stiles, L.7
Haigh, S.E.8
Katz, S.9
Las, G.10
-
27
-
-
23844558266
-
A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine
-
Wallace, D. C. (2005). A mitochondrial paradigm of metabolic and degenerative diseases, aging, and cancer: a dawn for evolutionary medicine. Annu. Rev. Genet. 39, 359-407.
-
(2005)
Annu. Rev. Genet.
, vol.39
, pp. 359-407
-
-
Wallace, D.C.1
-
28
-
-
0033913190
-
Shared roles of yeast glycogen synthase kinase 3 family members in nitrogen-responsive phosphorylation of meiotic regulator Ume6p
-
Xiao, Y. and Mitchell, A. P. (2000). Shared roles of yeast glycogen synthase kinase 3 family members in nitrogen-responsive phosphorylation of meiotic regulator Ume6p. Mol. Cell. Biol. 20, 5447-5453.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 5447-5453
-
-
Xiao, Y.1
Mitchell, A.P.2
-
29
-
-
67649458197
-
Lag-phase autophagy in the methylotrophic yeast Pichia pastoris
-
Yamashita, S., Yurimoto, H., Murakami, D., Yoshikawa, M., Oku, M. and Sakai, Y. (2009). Lag-phase autophagy in the methylotrophic yeast Pichia pastoris. Genes Cells 14, 861-870.
-
(2009)
Genes Cells
, vol.14
, pp. 861-870
-
-
Yamashita, S.1
Yurimoto, H.2
Murakami, D.3
Yoshikawa, M.4
Oku, M.5
Sakai, Y.6
|