메뉴 건너뛰기




Volumn 15, Issue 1, 2014, Pages

Whole-genome sequence analysis reveals differences in population management and selection of European low-input pig breeds

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GLYCOPROTEIN;

EID: 84904272526     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-15-601     Document Type: Article
Times cited : (46)

References (58)
  • 4
    • 84876762457 scopus 로고    scopus 로고
    • Volatile and amino Acid profiling of dry cured hams from different Swine breeds and processing methods
    • García-González DL, Aparicio R, Aparicio-Ruiz R. Volatile and amino Acid profiling of dry cured hams from different Swine breeds and processing methods. Molecules 2013, 18:3927-3947.
    • (2013) Molecules , vol.18 , pp. 3927-3947
    • García-González, D.L.1    Aparicio, R.2    Aparicio-Ruiz, R.3
  • 5
    • 84876459242 scopus 로고    scopus 로고
    • Farm-by-farm analysis of microsatellite, mtDNA and SNP genotype data reveals inbreeding and crossbreeding as threats to the survival of a native Spanish pig breed
    • Herrero-Medrano JM, Megens HJ, Crooijmans RP, Abellaneda JM, Ramis G. Farm-by-farm analysis of microsatellite, mtDNA and SNP genotype data reveals inbreeding and crossbreeding as threats to the survival of a native Spanish pig breed. Anim Genet 2013, 44:259-266.
    • (2013) Anim Genet , vol.44 , pp. 259-266
    • Herrero-Medrano, J.M.1    Megens, H.J.2    Crooijmans, R.P.3    Abellaneda, J.M.4    Ramis, G.5
  • 8
    • 68449086967 scopus 로고    scopus 로고
    • European pig genetic diversity: a minireview
    • Ollivier L. European pig genetic diversity: a minireview. Animal 2009, 3:915-924.
    • (2009) Animal , vol.3 , pp. 915-924
    • Ollivier, L.1
  • 10
    • 0032473955 scopus 로고    scopus 로고
    • Conservation biology: inbreeding leads to extinction
    • Frankham R, Ralls K. Conservation biology: inbreeding leads to extinction. Nature 1998, 392(April):441-442.
    • (1998) Nature , vol.392 , Issue.APRIL , pp. 441-442
    • Frankham, R.1    Ralls, K.2
  • 12
    • 84882648687 scopus 로고    scopus 로고
    • A genome-wide association scan in pig identifies novel regions associated with feed efficiency trait
    • Sahana G, Kadlecová V, Hornshøj H, Nielsen B, Christensen OF. A genome-wide association scan in pig identifies novel regions associated with feed efficiency trait. J Anim Sci 2013, 91:1041-1050.
    • (2013) J Anim Sci , vol.91 , pp. 1041-1050
    • Sahana, G.1    Kadlecová, V.2    Hornshøj, H.3    Nielsen, B.4    Christensen, O.F.5
  • 20
    • 84870699895 scopus 로고    scopus 로고
    • Genomic tests of variation in inbreeding among individuals and among chromosomes
    • Schraiber JG, Shih S, Slatkin M. Genomic tests of variation in inbreeding among individuals and among chromosomes. Genetics 2012, 192:1477-1482.
    • (2012) Genetics , vol.192 , pp. 1477-1482
    • Schraiber, J.G.1    Shih, S.2    Slatkin, M.3
  • 21
    • 36849080837 scopus 로고    scopus 로고
    • Genepop'007: a complete re-implementation of the genepop software for Windows and Linux
    • Rousset F. genepop'007: a complete re-implementation of the genepop software for Windows and Linux. Mol Ecol Resour 2008, 8:103-106.
    • (2008) Mol Ecol Resour , vol.8 , pp. 103-106
    • Rousset, F.1
  • 25
    • 0037072936 scopus 로고    scopus 로고
    • FEEL-1, a novel scavenger receptor with in vitro bacteria-binding and angiogenesis-modulating activities
    • Adachi H, Tsujimoto M. FEEL-1, a novel scavenger receptor with in vitro bacteria-binding and angiogenesis-modulating activities. J Biol Chem 2002, 277:34264-34270.
    • (2002) J Biol Chem , vol.277 , pp. 34264-34270
    • Adachi, H.1    Tsujimoto, M.2
  • 26
    • 22644438151 scopus 로고    scopus 로고
    • Phosphatidylinositide 3-kinase activity is required for stabilin-1-mediated endosomal transport of acLDL
    • Kzhyshkowska J, Gratchev A, Brundiers H, Mamidi S, Krusell L, Goerdt S. Phosphatidylinositide 3-kinase activity is required for stabilin-1-mediated endosomal transport of acLDL. Immunobiology 2005, 210:161-173.
    • (2005) Immunobiology , vol.210 , pp. 161-173
    • Kzhyshkowska, J.1    Gratchev, A.2    Brundiers, H.3    Mamidi, S.4    Krusell, L.5    Goerdt, S.6
  • 27
    • 78349290716 scopus 로고    scopus 로고
    • Multifunctional receptor stabilin-1 in homeostasis and disease
    • Kzhyshkowska J. Multifunctional receptor stabilin-1 in homeostasis and disease. ScientificWorldJournal 2010, 10:2039-2053.
    • (2010) ScientificWorldJournal , vol.10 , pp. 2039-2053
    • Kzhyshkowska, J.1
  • 29
    • 77958134755 scopus 로고    scopus 로고
    • Ascertainment biases in SNP chips affect measures of population divergence
    • Albrechtsen A, Nielsen FC, Nielsen R. Ascertainment biases in SNP chips affect measures of population divergence. Mol Biol Evol 2010, 27:2534-2547.
    • (2010) Mol Biol Evol , vol.27 , pp. 2534-2547
    • Albrechtsen, A.1    Nielsen, F.C.2    Nielsen, R.3
  • 30
    • 0034117004 scopus 로고    scopus 로고
    • The origin of the domestic pig: independent domestication and subsequent introgression
    • Giuffra E, Kijas JM, Amarger V, Carlborg O, Jeon JT, Andersson L. The origin of the domestic pig: independent domestication and subsequent introgression. Genetics 2000, 154:1785-1791.
    • (2000) Genetics , vol.154 , pp. 1785-1791
    • Giuffra, E.1    Kijas, J.M.2    Amarger, V.3    Carlborg, O.4    Jeon, J.T.5    Andersson, L.6
  • 33
    • 0038823350 scopus 로고    scopus 로고
    • An overview of mutation, polymorphism, and DNA repair
    • New York, Wiley-Liss, 2
    • Strachan T, Read A. An overview of mutation, polymorphism, and DNA repair. Hum Mol Genet 1999, New York, Wiley-Liss, 2.
    • (1999) Hum Mol Genet
    • Strachan, T.1    Read, A.2
  • 34
    • 11144279499 scopus 로고    scopus 로고
    • Zinc-alpha2-glycoprotein, a lipid mobilizing factor, is expressed and secreted by human (SGBS) adipocytes
    • Bao Y, Bing C, Hunter L, Jenkins JR, Wabitsch M, Trayhurn P. Zinc-alpha2-glycoprotein, a lipid mobilizing factor, is expressed and secreted by human (SGBS) adipocytes. FEBS Lett 2005, 579:41-47.
    • (2005) FEBS Lett , vol.579 , pp. 41-47
    • Bao, Y.1    Bing, C.2    Hunter, L.3    Jenkins, J.R.4    Wabitsch, M.5    Trayhurn, P.6
  • 35
    • 70349104688 scopus 로고    scopus 로고
    • Zinc-alpha2-glycoprotein is involved in regulation of body weight through inhibition of lipogenic enzymes in adipose tissue
    • Gong F-Y, Zhang S-J, Deng J-Y, Zhu H-J, Pan H, Li N-S, Shi Y-F. Zinc-alpha2-glycoprotein is involved in regulation of body weight through inhibition of lipogenic enzymes in adipose tissue. Int J Obes (Lond) 2009, 33:1023-1030.
    • (2009) Int J Obes (Lond) , vol.33 , pp. 1023-1030
    • Gong, F.-Y.1    Zhang, S.-J.2    Deng, J.-Y.3    Zhu, H.-J.4    Pan, H.5    Li, N.-S.6    Shi, Y.-F.7
  • 38
    • 67849119116 scopus 로고    scopus 로고
    • A genome scan for quantitative trait loci affecting three ear traits in a White Duroc x Chinese Erhualian resource population
    • Ma J, Qi W, Ren D, Duan Y, Qiao R, Guo Y, Yang Z, Li L, Milan D, Ren J, Huang L. A genome scan for quantitative trait loci affecting three ear traits in a White Duroc x Chinese Erhualian resource population. Anim Genet 2009, 40:463-467.
    • (2009) Anim Genet , vol.40 , pp. 463-467
    • Ma, J.1    Qi, W.2    Ren, D.3    Duan, Y.4    Qiao, R.5    Guo, Y.6    Yang, Z.7    Li, L.8    Milan, D.9    Ren, J.10    Huang, L.11
  • 39
    • 33751241411 scopus 로고    scopus 로고
    • Results of a whole-genome quantitative trait locus scan for growth, carcass composition and meat quality in a porcine four-way cross
    • Harmegnies N, Davin F, De Smet S, Buys N, Georges M, Coppieters W. Results of a whole-genome quantitative trait locus scan for growth, carcass composition and meat quality in a porcine four-way cross. Anim Genet 2006, 37:543-553.
    • (2006) Anim Genet , vol.37 , pp. 543-553
    • Harmegnies, N.1    Davin, F.2    De Smet, S.3    Buys, N.4    Georges, M.5    Coppieters, W.6
  • 42
    • 84865086519 scopus 로고    scopus 로고
    • Eco-geographical diversification of bitter taste receptor genes (TAS2Rs) among subspecies of chimpanzees (Pan troglodytes)
    • Hayakawa T, Sugawara T, Go Y, Udono T, Hirai H, Imai H. Eco-geographical diversification of bitter taste receptor genes (TAS2Rs) among subspecies of chimpanzees (Pan troglodytes). PLoS One 2012, 7:e43277.
    • (2012) PLoS One , vol.7
    • Hayakawa, T.1    Sugawara, T.2    Go, Y.3    Udono, T.4    Hirai, H.5    Imai, H.6
  • 43
    • 0028004195 scopus 로고
    • Is the bitter rejection response always adaptive?
    • Glendinning JI. Is the bitter rejection response always adaptive?. Physiol Behav 1994, 56:1217-1227.
    • (1994) Physiol Behav , vol.56 , pp. 1217-1227
    • Glendinning, J.I.1
  • 44
    • 2342647458 scopus 로고    scopus 로고
    • A resource allocation model describing consequences of artificial selection under metabolic stress
    • Van der Waaij EH. A resource allocation model describing consequences of artificial selection under metabolic stress. J Anim Sci 2004, 82:973-981.
    • (2004) J Anim Sci , vol.82 , pp. 973-981
    • Van der Waaij, E.H.1
  • 45
    • 84882678550 scopus 로고    scopus 로고
    • Heat stress effects on farrowing rate in sows: genetic parameter estimation using within-line and crossbred models
    • Bloemhof S, Kause A, Knol EF, Van Arendonk JAM, Misztal I. Heat stress effects on farrowing rate in sows: genetic parameter estimation using within-line and crossbred models. J Anim Sci 2012, 90:2109-2119.
    • (2012) J Anim Sci , vol.90 , pp. 2109-2119
    • Bloemhof, S.1    Kause, A.2    Knol, E.F.3    Van Arendonk, J.A.M.4    Misztal, I.5
  • 46
    • 84866499256 scopus 로고    scopus 로고
    • T-bet(+) Treg cells undergo abortive Th1 cell differentiation due to impaired expression of IL-12 receptor β2
    • Koch MA, Thomas KR, Perdue NR, Smigiel KS, Srivastava S, Campbell DJ. T-bet(+) Treg cells undergo abortive Th1 cell differentiation due to impaired expression of IL-12 receptor β2. Immunity 2012, 37:501-510.
    • (2012) Immunity , vol.37 , pp. 501-510
    • Koch, M.A.1    Thomas, K.R.2    Perdue, N.R.3    Smigiel, K.S.4    Srivastava, S.5    Campbell, D.J.6
  • 48
    • 62249108738 scopus 로고    scopus 로고
    • Single- and joint-population analyses of two experimental pig crosses to confirm quantitative trait loci on Sus scrofa chromosome 6 and leptin receptor effects on fatness and growth traits
    • Muñoz G, Ovilo C, Silió L, Tomás A, Noguera JL, Rodríguez MC. Single- and joint-population analyses of two experimental pig crosses to confirm quantitative trait loci on Sus scrofa chromosome 6 and leptin receptor effects on fatness and growth traits. J Anim Sci 2009, 87:459-468.
    • (2009) J Anim Sci , vol.87 , pp. 459-468
    • Muñoz, G.1    Ovilo, C.2    Silió, L.3    Tomás, A.4    Noguera, J.L.5    Rodríguez, M.C.6
  • 54
    • 33847690764 scopus 로고    scopus 로고
    • Effect of a low-growth rate on the frequency of osteochondrosis in Danish Landrace pigs (short communication)
    • Arnbjerg J. Effect of a low-growth rate on the frequency of osteochondrosis in Danish Landrace pigs (short communication). Arch Tierz, Dummerstorf 2007, 50:105-111.
    • (2007) Arch Tierz, Dummerstorf , vol.50 , pp. 105-111
    • Arnbjerg, J.1
  • 57
    • 77956534324 scopus 로고    scopus 로고
    • ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
    • Wang K, Li M, Hakonarson H. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res 2010, 38:e164.
    • (2010) Nucleic Acids Res , vol.38
    • Wang, K.1    Li, M.2    Hakonarson, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.