메뉴 건너뛰기




Volumn 9, Issue 7, 2014, Pages

Polymorphisms of SP110 are associated with both pulmonary and extra-pulmonary tuberculosis among the Vietnamese

Author keywords

[No Author keywords available]

Indexed keywords

ABDOMINAL TUBERCULOSIS; ACID FAST BACTERIUM; ADULT; ARTICLE; ASIAN; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; EXTRAPULMONARY TUBERCULOSIS; FEMALE; GENE; GENETIC ASSOCIATION; GENETIC VARIABILITY; HUMAN; IMMUNITY; INFECTION SENSITIVITY; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MALE; MOLECULAR MODEL; NONHUMAN; POPULATION BASED CASE CONTROL STUDY; POPULATION GENETICS; SINGLE NUCLEOTIDE POLYMORPHISM; SP110 GENE; SPUTUM SMEAR; TERTIARY HEALTH CARE; TUBERCULOUS LYMPHADENITIS; TUBERCULOUS MENINGITIS; TUBERCULOUS PLEURISY; VIET NAM; VIETNAMESE; ASIAN CONTINENTAL ANCESTRY GROUP; CASE CONTROL STUDY; GENETICS; IMMUNOLOGY; MACROPHAGE; METABOLISM; MIDDLE AGED; PATHOLOGY; PROCEDURES; TUBERCULOSIS; YOUNG ADULT;

EID: 84904129776     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0099496     Document Type: Article
Times cited : (25)

References (44)
  • 1
    • 77952549306 scopus 로고    scopus 로고
    • Tuberculosis control and elimination 2010-50: Cure, care, and social development
    • Lonnroth K, Castro KG, Chakaya JM, Chauhan LS, Floyd K, et al. (2010) Tuberculosis control and elimination 2010-50: cure, care, and social development. Lancet 375: 1814-1829.
    • (2010) Lancet , vol.375 , pp. 1814-1829
    • Lonnroth, K.1    Castro, K.G.2    Chakaya, J.M.3    Chauhan, L.S.4    Floyd, K.5
  • 4
    • 0033710984 scopus 로고    scopus 로고
    • Incidence of tuberculosis among a cohort of tuberculin-positive refugees in Australia: Reappraising the estimates of risk
    • Marks GB, Bai J, Simpson SE, Sullivan EA, Stewart GJ (2000) Incidence of tuberculosis among a cohort of tuberculin-positive refugees in Australia: reappraising the estimates of risk. Am J Respir Crit Care Med 162: 1851-1854.
    • (2000) Am J Respir Crit Care Med , vol.162 , pp. 1851-1854
    • Marks, G.B.1    Bai, J.2    Simpson, S.E.3    Sullivan, E.A.4    Stewart, G.J.5
  • 6
    • 84934443328 scopus 로고    scopus 로고
    • Epidemiology of tuberculosis immunology
    • Fox GJ, Menzies D (2013) Epidemiology of tuberculosis immunology. Adv Exp Med Biol 783: 1-32.
    • (2013) Adv Exp Med Biol , vol.783 , pp. 1-32
    • Fox, G.J.1    Menzies, D.2
  • 7
    • 84867619205 scopus 로고    scopus 로고
    • Innate immune gene polymorphisms in tuberculosis
    • Azad AK, Sadee W, Schlesinger LS (2012) Innate immune gene polymorphisms in tuberculosis. Infect Immun 80: 3343-3359.
    • (2012) Infect Immun , vol.80 , pp. 3343-3359
    • Azad, A.K.1    Sadee, W.2    Schlesinger, L.S.3
  • 8
    • 77950689572 scopus 로고    scopus 로고
    • Current findings, challenges and novel approaches in human genetic susceptibility to tuberculosis
    • Moller M, Hoal EG (2010) Current findings, challenges and novel approaches in human genetic susceptibility to tuberculosis. Tuberculosis (Edinb) 90: 71-83.
    • (2010) Tuberculosis (Edinb) , vol.90 , pp. 71-83
    • Moller, M.1    Hoal, E.G.2
  • 9
    • 77956635151 scopus 로고    scopus 로고
    • Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2
    • Thye T, Vannberg FO, Wong SH, Owusu-Dabo E, Osei I, et al. (2010) Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2. Nat Genet 42: 739-741.
    • (2010) Nat Genet , vol.42 , pp. 739-741
    • Thye, T.1    Vannberg, F.O.2    Wong, S.H.3    Owusu-Dabo, E.4    Osei, I.5
  • 10
    • 84862880135 scopus 로고    scopus 로고
    • Genome-wide association studies of tuberculosis in Asians identify distinct at-risk locus for young tuberculosis
    • Mahasirimongkol S, Yanai H, Mushiroda T, Promphittayarat W, Wattanapokayakit S, et al. (2012) Genome-wide association studies of tuberculosis in Asians identify distinct at-risk locus for young tuberculosis. J Hum Genet 57: 363-367.
    • (2012) J Hum Genet , vol.57 , pp. 363-367
    • Mahasirimongkol, S.1    Yanai, H.2    Mushiroda, T.3    Promphittayarat, W.4    Wattanapokayakit, S.5
  • 12
    • 84856301870 scopus 로고    scopus 로고
    • Mouse model of necrotic tuberculosis granulomas develops hypoxic lesions
    • Harper J, Skerry C, Davis SL, Tasneen R, Weir M, et al. (2012) Mouse model of necrotic tuberculosis granulomas develops hypoxic lesions. J Infect Dis 205: 595-602.
    • (2012) J Infect Dis , vol.205 , pp. 595-602
    • Harper, J.1    Skerry, C.2    Davis, S.L.3    Tasneen, R.4    Weir, M.5
  • 13
    • 38449084260 scopus 로고    scopus 로고
    • Progression of pulmonary tuberculosis and efficiency of bacillus Calmette-Guerin vaccination are genetically controlled via a common sst1-mediated mechanism of innate immunity
    • Yan BS, Pichugin AV, Jobe O, Helming L, Eruslanov EB, et al. (2007) Progression of pulmonary tuberculosis and efficiency of bacillus Calmette-Guerin vaccination are genetically controlled via a common sst1-mediated mechanism of innate immunity. J Immunol 179: 6919-6932.
    • (2007) J Immunol , vol.179 , pp. 6919-6932
    • Yan, B.S.1    Pichugin, A.V.2    Jobe, O.3    Helming, L.4    Eruslanov, E.B.5
  • 14
    • 0033860185 scopus 로고    scopus 로고
    • Sp110 localizes to the PML-Sp100 nuclear body and may function as a nuclear hormone receptor transcriptional coactivator
    • Bloch DB, Nakajima A, Gulick T, Chiche JD, Orth D, et al. (2000) Sp110 localizes to the PML-Sp100 nuclear body and may function as a nuclear hormone receptor transcriptional coactivator. Mol Cell Biol 20: 6138-6146.
    • (2000) Mol Cell Biol , vol.20 , pp. 6138-6146
    • Bloch, D.B.1    Nakajima, A.2    Gulick, T.3    Chiche, J.D.4    Orth, D.5
  • 15
    • 0017232852 scopus 로고
    • Familial hepatic venoocclusive disease with probable immune deficiency
    • Mellis C, Bale PM (1976) Familial hepatic venoocclusive disease with probable immune deficiency. J Pediatr 88: 236-242.
    • (1976) J Pediatr , vol.88 , pp. 236-242
    • Mellis, C.1    Bale, P.M.2
  • 16
    • 84865684727 scopus 로고    scopus 로고
    • Clinical, molecular, and cellular immunologic findings in patients with SP110-associated veno-occlusive disease with immunodeficiency syndrome
    • Cliffe ST, Bloch DB, Suryani S, Kamsteeg EJ, Avery DT, et al. (2012) Clinical, molecular, and cellular immunologic findings in patients with SP110-associated veno-occlusive disease with immunodeficiency syndrome. J Allergy Clin Immun 130: 735-742 e736.
    • (2012) J Allergy Clin Immun , vol.130
    • Cliffe, S.T.1    Bloch, D.B.2    Suryani, S.3    Kamsteeg, E.J.4    Avery, D.T.5
  • 19
  • 20
    • 34147140512 scopus 로고    scopus 로고
    • SP110 polymorphisms are not associated with pulmonary tuberculosis in a South African population
    • DOI 10.1007/s00439-007-0335-1
    • Babb C, Keet EH, van Helden PD, Hoal EG (2007) SP110 polymorphisms are not associated with pulmonary tuberculosis in a South African population. Hum Genet 121: 521-522. (Pubitemid 46554689)
    • (2007) Human Genetics , vol.121 , Issue.3-4 , pp. 521-522
    • Babb, C.1    Keet, E.H.2    Van Helden, P.D.3    Hoal, E.G.4
  • 23
    • 84861930658 scopus 로고    scopus 로고
    • Polymorphisms in SP110 are not associated with pulmonary tuberculosis in Indonesians
    • Png E, Alisjahbana B, Sahiratmadja E, Marzuki S, Nelwan R, et al. (2012) Polymorphisms in SP110 are not associated with pulmonary tuberculosis in Indonesians. Infect Genet Evol 12: 1319-1323.
    • (2012) Infect Genet Evol , vol.12 , pp. 1319-1323
    • Png, E.1    Alisjahbana, B.2    Sahiratmadja, E.3    Marzuki, S.4    Nelwan, R.5
  • 24
    • 79958279813 scopus 로고    scopus 로고
    • Genetic association study suggests a role for SP110 variants in lymph node tuberculosis but not pulmonary tuberculosis in north Indians
    • Abhimanyu, Jha P, Jain A, Arora K, Bose M (2011) Genetic association study suggests a role for SP110 variants in lymph node tuberculosis but not pulmonary tuberculosis in north Indians. Hum Immunol 72: 576-580.
    • (2011) Hum Immunol , vol.72 , pp. 576-580
    • Abhimanyu, J.P.1    Jain, A.2    Arora, K.3    Bose, M.4
  • 25
    • 79956305149 scopus 로고    scopus 로고
    • Association of SP110 gene polymorphisms with susceptibility to tuberculosis in a Chinese population
    • Liang L, Zhao YL, Yue J, Liu JF, Han M, et al. (2011) Association of SP110 gene polymorphisms with susceptibility to tuberculosis in a Chinese population. Infect Genet Evol 11: 934-939.
    • (2011) Infect Genet Evol , vol.11 , pp. 934-939
    • Liang, L.1    Zhao, Y.L.2    Yue, J.3    Liu, J.F.4    Han, M.5
  • 26
    • 84865393696 scopus 로고    scopus 로고
    • SP110 gene polymorphisms and tuberculosis susceptibility: A systematic review and meta-analysis based on 10 624 subjects
    • Lei X, Zhu H, Zha L, Wang Y (2012) SP110 gene polymorphisms and tuberculosis susceptibility: A systematic review and meta-analysis based on 10 624 subjects. infect Genet Evol 12: 1473-1480.
    • (2012) Infect Genet Evol , vol.12 , pp. 1473-1480
    • Lei, X.1    Zhu, H.2    Zha, L.3    Wang, Y.4
  • 29
    • 84862255999 scopus 로고    scopus 로고
    • Association of IFNGR2 gene polymorphisms with pulmonary tuberculosis among the Vietnamese
    • Hijikata M, Shojima J, Matsushita I, Tokunaga K, Ohashi J, et al. (2012) Association of IFNGR2 gene polymorphisms with pulmonary tuberculosis among the Vietnamese. Hum Genet 131: 675-682.
    • (2012) Hum Genet , vol.131 , pp. 675-682
    • Hijikata, M.1    Shojima, J.2    Matsushita, I.3    Tokunaga, K.4    Ohashi, J.5
  • 30
    • 59649090821 scopus 로고    scopus 로고
    • SNP genotyping using the Sequenom MassARRAY iPLEX platform
    • editorial board, Jonathan L. Haines, et al Chapter 2: Unit 2 12.
    • Gabriel S, Ziaugra L, Tabbaa D (2009) SNP genotyping using the Sequenom MassARRAY iPLEX platform. Current protocols in human genetics/editorial board, Jonathan L. Haines, et al Chapter 2: Unit 2 12.
    • (2009) Current Protocols in Human Genetics
    • Gabriel, S.1    Ziaugra, L.2    Tabbaa, D.3
  • 31
    • 1842539516 scopus 로고    scopus 로고
    • A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other
    • Nyholt DR (2004) A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other. Am J Hum Genet 74: 765-769.
    • (2004) Am J Hum Genet , vol.74 , pp. 765-769
    • Nyholt, D.R.1
  • 32
    • 30744434862 scopus 로고    scopus 로고
    • Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix
    • DOI 10.1038/sj.hdy.6800717, PII 6800717
    • Li J, Ji L (2005) Adjusting multiple testing in multilocus analyses using the eigenvalues of a correlation matrix. Heredity (Edinb) 95: 221-227. (Pubitemid 43093236)
    • (2005) Heredity , vol.95 , Issue.3 , pp. 221-227
    • Li, J.1    Ji, L.2
  • 33
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: Analysis and visualization of LD and haplotype maps
    • DOI 10.1093/bioinformatics/bth457
    • Barrett JC, Fry B, Maller J, Daly MJ (2005) Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21: 263-265. (Pubitemid 40202029)
    • (2005) Bioinformatics , vol.21 , Issue.2 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 34
    • 77955151784 scopus 로고    scopus 로고
    • MutationTaster evaluates disease-causing potential of sequence alterations
    • Schwarz JM, Rodelsperger C, Schuelke M, Seelow D (2010) MutationTaster evaluates disease-causing potential of sequence alterations. Nat Methods 7: 575-576.
    • (2010) Nat Methods , vol.7 , pp. 575-576
    • Schwarz, J.M.1    Rodelsperger, C.2    Schuelke, M.3    Seelow, D.4
  • 35
    • 0016197604 scopus 로고
    • Amino acid difference formula to help explain protein evolution
    • Grantham R (1974) Amino acid difference formula to help explain protein evolution. Science 185: 862-864.
    • (1974) Science , vol.185 , pp. 862-864
    • Grantham, R.1
  • 36
    • 0021710490 scopus 로고
    • Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications
    • DOI 10.1007/BF02100628
    • Li WH, Wu CI, Luo CC (1984) Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications. J Mol Evol 21: 58-71. (Pubitemid 15172244)
    • (1984) Journal of Molecular Evolution , vol.21 , Issue.1 , pp. 58-71
    • Li, W.H.1    Wu, C.I.2    Luo, C.C.3
  • 37
    • 79956305149 scopus 로고    scopus 로고
    • Association of SP110 gene polymorphisms with susceptibility to tuberculosis in a Chinese population
    • Liang L, Zhao YL, Yue J, Liu JF, Han M, et al. (2011) Association of SP110 gene polymorphisms with susceptibility to tuberculosis in a Chinese population. Infect Genet Evol 11: 934-939.
    • (2011) Infect Genet Evol , vol.11 , pp. 934-939
    • Liang, L.1    Zhao, Y.L.2    Yue, J.3    Liu, J.F.4    Han, M.5
  • 38
    • 84875623538 scopus 로고    scopus 로고
    • Identification of genetic associations of SP110/MYBBP1A/RELA with pulmonary tuberculosis in the Chinese Han population
    • Cai L, Deng SL, Liang L, Pan H, Zhou J, et al. (2013) Identification of genetic associations of SP110/MYBBP1A/RELA with pulmonary tuberculosis in the Chinese Han population. Hum Genet 132: 265-273.
    • (2013) Hum Genet , vol.132 , pp. 265-273
    • Cai, L.1    Deng, S.L.2    Liang, L.3    Pan, H.4    Zhou, J.5
  • 40
    • 25144501575 scopus 로고    scopus 로고
    • Genetic association studies
    • DOI 10.1016/S0140-6736(05)67424-7, PII S0140673605674247
    • Cordell HJ, Clayton DG (2005) Genetic association studies. Lancet 366: 1121-1131. (Pubitemid 41338767)
    • (2005) Lancet , vol.366 , Issue.9491 , pp. 1121-1131
    • Cordell, H.J.1    Clayton, D.G.2
  • 41
    • 0035176751 scopus 로고    scopus 로고
    • Genetic case-control association studies-correcting for multiple testing
    • Nyholt DR (2001) Genetic case-control association studies-correcting for multiple testing. Hum Genet 109: 564-567.
    • (2001) Hum Genet , vol.109 , pp. 564-567
    • Nyholt, D.R.1
  • 43
    • 69849089789 scopus 로고    scopus 로고
    • Prevalence and risk factors for tuberculosis infection among hospital workers in Hanoi, Viet Nam
    • Lien LT, Hang NT, Kobayashi N, Yanai H, Toyota E, et al. (2009) Prevalence and risk factors for tuberculosis infection among hospital workers in Hanoi, Viet Nam. PLoS ONE 4: e6798.
    • (2009) PLoS ONE , vol.4
    • Lien, L.T.1    Hang, N.T.2    Kobayashi, N.3    Yanai, H.4    Toyota, E.5
  • 44
    • 77955151784 scopus 로고    scopus 로고
    • MutationTaster evaluates disease-causing potential of sequence alterations
    • Schwarz JM, Rodelsperger C, Schuelke M, Seelow D (2010) MutationTaster evaluates disease-causing potential of sequence alterations. Nat Methods 7: 575-576.
    • (2010) Nat Methods , vol.7 , pp. 575-576
    • Schwarz, J.M.1    Rodelsperger, C.2    Schuelke, M.3    Seelow, D.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.