Genes as early responders regulate quorum-sensing and control bacterial cooperation in Pseudomonas aeruginosa

PLoS ONE

Volumn 9, Issue 7, 2014, Pages

  Zhao, Kelei ^a,b   Li, Yi ^a   Yue, Bisong ^b   Wu, Min ^a  

^a UNIVERSITY OF NORTH DAKOTA SCHOOL OF MEDICINE AND HEALTH SCIENCES   (United States)

^b SICHUAN UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CELL ENZYME; PROTEIN RSMY; PROTEIN RSMZ; RNA; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; BACTERIAL RNA;

ARTICLE; BACTERIAL CELL; CELL FUNCTION; ENVIRONMENTAL FACTOR; ENZYME SYNTHESIS; GENE EXPRESSION REGULATION; GENE FUNCTION; NONHUMAN; POPULATION DENSITY; PSEUDOMONAS AERUGINOSA; QUORUM SENSING; SOCIAL INTERACTION; THREAT; BACTERIAL GENE; BIOFILM; GENETICS; GENOTYPE ENVIRONMENT INTERACTION; GROWTH, DEVELOPMENT AND AGING; METABOLISM; ORGANISMAL INTERACTION; PHYSIOLOGICAL STRESS; REGULATOR GENE;

BACTERIAL PROTEINS; BIOFILMS; GENE EXPRESSION REGULATION, BACTERIAL; GENE-ENVIRONMENT INTERACTION; GENES, BACTERIAL; GENES, REGULATOR; MICROBIAL INTERACTIONS; PSEUDOMONAS AERUGINOSA; QUORUM SENSING; RNA, BACTERIAL; STRESS, PHYSIOLOGICAL;

EID: 84904052302     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0101887     Document Type: Article

References (42)

1. Darch SE, West SA, Winzer K, Diggle SP (2012) Density-dependent fitness benefits in quorum-sensing bacterial populations. Proc Natl Acad Sci USA 109: 8259-8263.
2. Schuster M, Sexton DJ, Diggle SP, Greenberg EP (2013) Acyl-homoserine lactone quorum sensing: from evolution to application. Annu Rev Microbiol 67: 43-63.
3. Hense BA, Kuttler C, Müller J, Rothballer M, Hartmann A, Kreft JU (2007) Does efficiency sensing unify diffusion and quorum sensing? Nat Rev Microbiol 5: 230-239. (Pubitemid 46291282)
4. West SA, Winzer K, Gardner A, Diggle SP (2012) Quorum sensing and the confusion about diffusion. Trends Microbiol 20: 586-594.
5. Smith DR, Chapman MR (2010) Economical evolution: microbes reduce the synthetic cost of extracellular proteins. mBio 1: e00131-10.
6. Wilder CN, Diggle SP, Schuster M (2011) Cooperation and cheating in Pseudomonas aeruginosa: the roles of the las, rhl and pqs quorum-sensing systems. ISME J 5: 1332-1343.
7. Schuster M, Lohstroh CP, Ogi T, Greenberg EP (2003) Identification, timing and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis. J Bacteriol 185: 2066-2079. (Pubitemid 36363167)
8. Brencic A, McFarland KA, McManus HR, Castang S, Mogno I, et al. (2009) The GacS/GacA signal transduction system of Pseudomonas aeruginosa acts exclusively through its control over the transcription of the RsmY and RsmZ regulatory small RNAs. Mol Microbiol 73: 434-445.
9. Wei X, Huang X, Tang L, Wu D, Xu Y (2013) Global control of GacA in secondary metabolism, primary metabolism, secretion systems, and motility in the rhizobacterium Pseudomonas aeruginosa M18. J Bacteriol 195: 3387-3400.
10. Kay E, Dubuis C, Haas D (2005) Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0. Proc Natl Acad Sci USA 102: 17136-17141. (Pubitemid 41692696)
11. Ryan WJ1, O'Leary ND, O'Mahony M, Dobson AD (2013) GacS-dependent regulation of polyhydroxyalkanoate synthesis in Pseudomonas putida CA-3. Appl Environ Microbiol 79: 1795-1802.
12. Frangipani E, Visaggio D, Heeb S, Kaever V, Cámara M, et al. (2014) The Gac/Rsm and cyclic-di-GMP signalling networks coordinately regulate iron uptake in Pseudomonas aeruginosa. Environ Microbiol 16: 676-688.
13. Weilbacher T, Suzuki K, Dubey AK, Wang X, Gudapaty S, et al. (2003) A novel sRNA component of the carbon storage regulatory system of Escherichia coli. Mol Microbiol 48: 657-670. (Pubitemid 36819053)
14. Heurlier K, Williams F, Heeb S, Dormond C, Pessi G, et al. (2004) Positive control of swarming, rhamnolipid synthesis, and lipase production by the posttranscriptional RsmA/RsmZ system in Pseudomonas aeruginosa PAO1. J Bacteriol 186: 2936-2945. (Pubitemid 38609736)
15. Kay E, Humair B, Dénervaud V, Riedel K, Spahr S, et al. (2006) Two GacA-dependent small RNAs modulate the quorum-sensing response in Pseudomonas aeruginosa. J Bacteriol 188: 6026-6033. (Pubitemid 44384112)
16. Intile PJ, Diaz MR, Urbanowski ML, Wolfgang MC, Yahr TL (2014) The AlgZR two-component system recalibrates the RsmAYZ posttranscriptional regulatory system to inhibit expression of the Pseudomonas aeruginosa type III secretion system. J Bacteriol 196: 357-366.
17. Yuan K, Huang C, Fox J, Gaid M, Weaver A, et al. (2011). Elevated inflammatory response in caveolin-1-deficient mice with Pseudomonas aeruginosa infection is mediated by STAT3 protein and nuclear factor kappaB (NFkappaB). J Biol Chem 286: 21814-21825.
18. Zhao K, Deng X, He C, Yue B, Wu M (2013). Pseudomonas aeruginosa outer membrane vesicles modulate host immune responses by targeting the Toll-like receptor 4 signaling pathway. Infect Immun 81: 4509-4518.
19. Deng X1, Weerapana E, Ulanovskaya O, Sun F, Liang H, et al. (2013). Proteome-wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria. Cell Host Microbe 13: 358-370.
20. Reimmann C, Beyeler M, Latifi A, Winteler H, Foglino M, et al. (1997) The global activator GacA of Pseudomonas aeruginosa PAO positively controls the production of the autoinducer N-butyryl-homoserine lactone and the formation of the virulence factors pyocyanin, cyanide, and lipase. Mol Microbiol 24: 309-319. (Pubitemid 27223862)
21. Pessi G, Williams F, Hindle Z, Heurlier K, Holden MT, et al. (2001) The global posttranscriptional regulator RsmA modulates production of virulence determinants and N-acylhomoserine lactones in Pseudomonas aeruginosa. J Bacteriol 183: 6676-6683. (Pubitemid 33026760)
22. Zhou X, Li X, Ye Y, Zhao K, Zhuang Y, et al. (2014). MicroRNA-302b augments host defense to bacteria by regulating inflammatory responses via feedback to TLR/IRAK4 circuits. Nat Commun 5: 3619. doi:10.1038/ncomms4619.
23. Maeda T, García-Contreras R, Pu M, Sheng L, Garcia LR, et al. (2012) Quorum quenching quandary: resistance to antivirulence compounds. ISME J 6: 493-501.
24. Popat R, Crusz SA, Messina M, Williams P, West SA, et al. (2012). Quorum-sensing and cheating in bacterial biofilms. Proc R Soc B 279: 4765-4771.
25. Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucl Acids Res 29: e45.
26. Kannan S, Pang H, Foster DC, Rao Z, Wu M (2006). Human 8-oxoguanine DNA glycosylase increases resistance to hyperoxic cytotoxicity in lung epithelial cells and involvement with altered MAPK activity. Cell Death Differ 13: 311-323. (Pubitemid 43102214)
27. Heurlier K, Dénervaud V, Haenni M, Guy L, Krishnapillai V, et al. (2005) Quorum-sensing-negative (lasR) mutants of Pseudomonas aeruginosa avoid cell lysis and death. J Bacteriol 187: 4875-4883. (Pubitemid 40962204)
28. Diggle SP, Griffin AS, Campbell GS, West SA (2007) Cooperation and conflict in quorum-sensing bacterial populations. Nature 450: 411-414. (Pubitemid 350126749)
29. Dandekar AA, Chugani S, Greenberg EP (2012) Bacterial quorum sensing and metabolic incentives to cooperate. Science 338: 264-266.
30. Parkins MD, Ceri H, Storey DG (2001) Pseudomonas aeruginosa GacA, a factor in multihost virulence, is also essential for biofilm formation. Mol Microbiol 40: 1215-1226. (Pubitemid 32574987)
31. LaSarre B, Federle MJ (2013) Exploiting quorum sensing to confuse bacterial pathogens. Microbiol Mol Biol Rev 77: 73-111.
32. Garg N, Manchanda G, Kumar A (2014) Bacterial quorum sensing: circuits and applications. Antonie Van Leeuwenhoek. 105: 289-305.
33. Witzany G (2008) Bio-communication of bacteria and their evolutionary roots in natural genome editing competences of viruses. Open Evol J 2: 44-54.
34. Sandoz KM, Mitzimberg SM, Schuster M (2007) Social cheating in Pseudomonas aeruginosa quorum sensing. Proc Natl Acad Sci USA 104: 15876-15881. (Pubitemid 350035392)
35. Latifi A, Foglino M, Tanaka K, Williams P, Lazdunski A (1996) A hierarchical quorum-sensing cascade in Pseudomonas aeruginosa links the transcriptional activators LasR and RhIR (VsmR) to expression of the stationary-phase sigma factor RpoS. Mol Microbiol 21: 1137-1146. (Pubitemid 26313241)
36. Pesci EC, Pearson JP, Seed PC, Iglewski BH (1997) Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa. J Bacteriol 179: 3127-3132. (Pubitemid 27202984)
37. Geske GD, Wezeman RJ, Siegel AP, Blackwell HE (2005) Small molecule inhibitors of bacterial quorum sensing and biofilm formation. J Am Chem Soc 127: 12762-12763. (Pubitemid 41339140)
38. Kim C, Kim J, Park HY, Park HJ, Lee JH, et al. (2008) Furanone derivatives as quorum-sensing antagonists of Pseudomonas aeruginosa. Appl Microbiol Biotechnol 80: 37-47.
39. Muh U, Schuster M, Heim R, Singh A, Olson ER, et al. (2006) Novel Pseudomonas aeruginosa quorum-sensing inhibitors identified in an ultra-high-throughput screen. Antimicrob Agents Chemother 50: 3674-3679. (Pubitemid 44684880)
40. Smith KM, Bu Y, Suga H (2003) Induction and inhibition of Pseudomonas aeruginosa quorum sensing by synthetic autoinducer analogs. Chem Biol 10: 81-89. (Pubitemid 36154477)
41. Wu H, Song Z, Hentzer M, Andersen JB, Molin S, et al. (2004) Synthetic furanones inhibit quorum-sensing and enhance bacterial clearance in Pseudomonas aeruginosa lung infection in mice. J Antimicrob Chemother 53: 1054-1061. (Pubitemid 38807648)
42. Yang L, Rybtke MT, Jakobsen TH, Hentzer M, Bjarnsholt T, et al. (2009) Computer-aided identification of recognized drugs as Pseudomonas aeruginosa quorum-sensing inhibitors. Antimicrob Agents Chemother 53: 2432-2443.