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Volumn 9, Issue 6, 2014, Pages

Erratum: Tissue-specific expressed antibody variable gene repertoires (PLoS ONE (2014) 9:6 (e100839) DOI: 10.1371/journal.pone.0100839);Tissue-specific expressed antibody variable gene repertoires

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBODY; RNA; COMPLEMENTARITY DETERMINING REGION; DNA; IMMUNOGLOBULIN VARIABLE REGION;

EID: 84903535340     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0228412     Document Type: Erratum
Times cited : (34)

References (42)
  • 1
    • 0020534965 scopus 로고
    • Somatic generation of antibody diversity
    • Tonegawa S (1983) Somatic generation of antibody diversity. Nature 302: 575-581.
    • (1983) Nature , vol.302 , pp. 575-581
    • Tonegawa, S.1
  • 2
    • 3242888974 scopus 로고    scopus 로고
    • V(D)J recombination
    • doi:10.1111/j.0105-2896.2004.00173.x
    • Schatz DG (2004) V(D)J recombination. Immunol Rev 200: 5-11. doi:10.1111/j.0105-2896.2004.00173.x.
    • (2004) Immunol Rev , vol.200 , pp. 5-11
    • Schatz, D.G.1
  • 4
    • 39749182247 scopus 로고    scopus 로고
    • Antibody diversification by somatic mutation: From Burnet onwards
    • doi:10.1038/sj.icb.7100160
    • Neuberger MS (2008) Antibody diversification by somatic mutation: from Burnet onwards. Immunol Cell Biol 86: 124-132. doi:10.1038/sj.icb.7100160.
    • (2008) Immunol Cell Biol , vol.86 , pp. 124-132
    • Neuberger, M.S.1
  • 7
    • 0025787513 scopus 로고
    • Restricted Ig H chain V gene usage in the human antibody response to Haemophilus influenzae type b capsular polysaccharide
    • Adderson EE, Shackelford PG, Quinn A, Carroll WL (1991) Restricted Ig H chain V gene usage in the human antibody response to Haemophilus influenzae type b capsular polysaccharide. J Immunol 147: 1667-1674.
    • (1991) J Immunol , vol.147 , pp. 1667-1674
    • Adderson, E.E.1    Shackelford, P.G.2    Quinn, A.3    Carroll, W.L.4
  • 8
    • 49149093819 scopus 로고    scopus 로고
    • Immunodominance of the VH1-46 antibody gene segment in the primary repertoire of human rotavirus-specific B cells is reduced in the memory compartment through somatic mutation of nondominant clones
    • Tian C, Luskin GK, Dischert KM, Higginbotham JN, Shepherd BE, et al. (2008) Immunodominance of the VH1-46 antibody gene segment in the primary repertoire of human rotavirus-specific B cells is reduced in the memory compartment through somatic mutation of nondominant clones. J Immunol 180: 3279-3288.
    • (2008) J Immunol , vol.180 , pp. 3279-3288
    • Tian, C.1    Luskin, G.K.2    Dischert, K.M.3    Higginbotham, J.N.4    Shepherd, B.E.5
  • 9
    • 33846200858 scopus 로고    scopus 로고
    • Evidence for preferential Ig gene usage and differential TdT and exonuclease activities in human naïve and memory B cells
    • DOI 10.1016/j.molimm.2006.11.020, PII S0161589006007012
    • Tian C, Luskin GK, Dischert KM, Higginbotham JN, Shepherd BE, et al. (2007) Evidence for preferential Ig gene usage and differential TdT and exonuclease activities in human naïve and memory B cells. Mol Immunol 44: 2173-2183. doi:10.1016/j.molimm.2006.11.020. (Pubitemid 46097126)
    • (2007) Molecular Immunology , vol.44 , Issue.9 , pp. 2173-2183
    • Tian, C.1    Luskin, G.K.2    Dischert, K.M.3    Higginbotham, J.N.4    Shepherd, B.E.5    Crowe Jr., J.E.6
  • 11
    • 59249105235 scopus 로고    scopus 로고
    • Preferential use of the VH5-51 gene segment by the human immune response to code for antibodies against the V3 domain of HIV-1
    • doi:10.1016/j.molimm.2008.09.005
    • Gorny MK, Wang X-H, Williams C, Volsky B, Revesz K, et al. (2009) Preferential use of the VH5-51 gene segment by the human immune response to code for antibodies against the V3 domain of HIV-1. Mol Immunol 46: 917-926. doi:10.1016/j.molimm.2008.09.005.
    • (2009) Mol Immunol , vol.46 , pp. 917-926
    • Gorny, M.K.1    Wang, X.-H.2    Williams, C.3    Volsky, B.4    Revesz, K.5
  • 12
    • 0030256053 scopus 로고    scopus 로고
    • Nonrandom features of the human immunoglobulin variable region gene repertoire expressed in response to HIV-1
    • Zouali M (1996) Nonrandom features of the human immunoglobulin variable region gene repertoire expressed in response to HIV-1. Appl Biochem Biotech 61: 149-155.
    • (1996) Appl Biochem Biotech , vol.61 , pp. 149-155
    • Zouali, M.1
  • 13
    • 84865631443 scopus 로고    scopus 로고
    • High-throughput antibody sequencing reveals genetic evidence of global regulation of the naïve and memory repertoires that extends across individuals
    • doi:10.1038/gene.2012.20
    • Briney B, Willis JR, McKinney BA, Crowe JE (2012) High-throughput antibody sequencing reveals genetic evidence of global regulation of the naïve and memory repertoires that extends across individuals. Genes Immun. doi:10.1038/gene.2012.20.
    • (2012) Genes Immun
    • Briney, B.1    Willis, J.R.2    McKinney, B.A.3    Crowe, J.E.4
  • 14
    • 79961160227 scopus 로고    scopus 로고
    • High-resolution description of antibody heavy-chain repertoires in humans
    • doi:10.1371/journal.pone.0022365
    • Arnaout R, Lee W, Cahill P, Honan T, Sparrow T, et al. (2011) High-resolution description of antibody heavy-chain repertoires in humans. PLoS ONE 6: e22365. doi:10.1371/journal.pone.0022365.
    • (2011) PLoS ONE , vol.6
    • Arnaout, R.1    Lee, W.2    Cahill, P.3    Honan, T.4    Sparrow, T.5
  • 15
    • 84873605796 scopus 로고    scopus 로고
    • High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire
    • doi:10.1038/nbt.2492
    • Dekosky BJ, Ippolito GC, Deschner RP, Lavinder JJ, Wine Y, et al. (2013) High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire. Nature biotechnology. doi:10.1038/nbt.2492.
    • (2013) Nature Biotechnology
    • Dekosky, B.J.1    Ippolito, G.C.2    Deschner, R.P.3    Lavinder, J.J.4    Wine, Y.5
  • 16
    • 77956551877 scopus 로고    scopus 로고
    • High-throughput immunoglobulin repertoire analysis distinguishes between human IgM memory and switched memory B-cell populations
    • doi:10.1182/blood-2010-03-275859
    • Wu Y-C, Kipling D, Leong HS, Martin V, Ademokun AA, et al. (2010) High-throughput immunoglobulin repertoire analysis distinguishes between human IgM memory and switched memory B-cell populations. Blood 116: 1070-1078. doi:10.1182/blood-2010-03-275859.
    • (2010) Blood , vol.116 , pp. 1070-1078
    • Wu, Y.-C.1    Kipling, D.2    Leong, H.S.3    Martin, V.4    Ademokun, A.A.5
  • 17
    • 77954601328 scopus 로고    scopus 로고
    • Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing
    • Boyd SD, Marshall EL, Merker JD, Maniar JM, Zhang LN, et al. (2009) Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing. Sci Transl Med 1: 12ra23.
    • (2009) Sci Transl Med , vol.1
    • Boyd, S.D.1    Marshall, E.L.2    Merker, J.D.3    Maniar, J.M.4    Zhang, L.N.5
  • 18
    • 77953632929 scopus 로고    scopus 로고
    • Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements
    • doi:10.4049/jimmunol.1000445
    • Boyd SD, Gaëta BA, Jackson KJ, Fire AZ, Marshall EL, et al. (2010) Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements. J Immunol 184: 6986-6992. doi:10.4049/jimmunol. 1000445.
    • (2010) J Immunol , vol.184 , pp. 6986-6992
    • Boyd, S.D.1    Gaëta, B.A.2    Jackson, K.J.3    Fire, A.Z.4    Marshall, E.L.5
  • 19
    • 79953036467 scopus 로고    scopus 로고
    • Immunoglobulin responses at the mucosal interface
    • doi:10.1146/annurev-immunol-031210-101317
    • Cerutti A, Chen K, Chorny A (2011) Immunoglobulin responses at the mucosal interface. Annu Rev Immunol 29: 273-293. doi:10.1146/annurev-immunol- 031210-101317.
    • (2011) Annu Rev Immunol , vol.29 , pp. 273-293
    • Cerutti, A.1    Chen, K.2    Chorny, A.3
  • 20
    • 0037270866 scopus 로고    scopus 로고
    • Intestinal IgA synthesis: Regulation of front-line body defences
    • DOI 10.1038/nri982
    • Fagarasan S, Honjo T (2003) Intestinal IgA synthesis: regulation of front-line body defences. Nat Rev Immunol 3: 63-72. doi:10.1038/nri982. (Pubitemid 37328700)
    • (2003) Nature Reviews Immunology , vol.3 , Issue.1 , pp. 63-72
    • Fagarasan, S.1    Honjo, T.2
  • 21
    • 77954898661 scopus 로고    scopus 로고
    • The sensing of environmental stimuli by follicular dendritic cells promotes immunoglobulin A generation in the gut
    • doi:10.1016/j.immuni.2010.07.003
    • Suzuki K, Maruya M, Kawamoto S, Sitnik K, Kitamura H, et al. (2010) The sensing of environmental stimuli by follicular dendritic cells promotes immunoglobulin A generation in the gut. Immunity 33: 71-83. doi:10.1016/j. immuni.2010.07.003.
    • (2010) Immunity , vol.33 , pp. 71-83
    • Suzuki, K.1    Maruya, M.2    Kawamoto, S.3    Sitnik, K.4    Kitamura, H.5
  • 22
    • 0034320231 scopus 로고    scopus 로고
    • IgA and IgM V(H) repertoires in human colon: Evidence for clonally expanded B cells that are widely disseminated
    • Holtmeier W, Hennemann A, Caspary WF (2000) IgA and IgM V(H) repertoires in human colon: evidence for clonally expanded B cells that are widely disseminated. Gastroenterology 119: 1253-1266.
    • (2000) Gastroenterology , vol.119 , pp. 1253-1266
    • Holtmeier, W.1    Hennemann, A.2    Caspary, W.F.3
  • 25
    • 84867834056 scopus 로고    scopus 로고
    • IMGT/HighV-QUEST: The IMGT web portal for immunoglobulin (IG) or antibody and T cell receptor (TR) analysis from NGS high throughput and deep sequencing
    • Alamyar E, Giudicelli V, Li S, Duroux P, Lefranc M-P (2012) IMGT/HighV-QUEST: the IMGT web portal for immunoglobulin (IG) or antibody and T cell receptor (TR) analysis from NGS high throughput and deep sequencing. Immunome Res 8: 26.
    • (2012) Immunome Res , vol.8 , pp. 26
    • Alamyar, E.1    Giudicelli, V.2    Li, S.3    Duroux, P.4    Lefranc, M.-P.5
  • 26
    • 75249087100 scopus 로고    scopus 로고
    • edgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • doi:10.1093/bioinformatics/btp616
    • Robinson MD, McCarthy DJ, Smyth GK (2010) edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26: 139-140. doi:10.1093/bioinformatics/btp616.
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 27
    • 79955494239 scopus 로고    scopus 로고
    • The majority of intestinal IgA+ and IgG+ plasmablasts in the human gut are antigen-specific
    • doi:10.1172/JCI44447
    • Benckert J, Schmolka N, Kreschel C, Zoller MJ, Sturm A, et al. (2011) The majority of intestinal IgA+ and IgG+ plasmablasts in the human gut are antigen-specific. J Clin Invest 121: 1946-1955. doi:10.1172/JCI44447.
    • (2011) J Clin Invest , vol.121 , pp. 1946-1955
    • Benckert, J.1    Schmolka, N.2    Kreschel, C.3    Zoller, M.J.4    Sturm, A.5
  • 28
    • 84860706280 scopus 로고    scopus 로고
    • Human peripheral blood antibodies with long HCDR3s are established primarily at original recombination using a limited subset of germline genes
    • doi:10.1371/journal.-pone.0036750
    • Briney B, Willis JR, Crowe JE (2012) Human peripheral blood antibodies with long HCDR3s are established primarily at original recombination using a limited subset of germline genes. PLoS ONE 7: e36750. doi:10.1371/journal.-pone. 0036750.
    • (2012) PLoS ONE , vol.7
    • Briney, B.1    Willis, J.R.2    Crowe, J.E.3
  • 29
    • 0035072255 scopus 로고    scopus 로고
    • Molecular structure of eight human autoreactive monoclonal antibodies
    • DOI 10.1046/j.1365-2567.2001.01159.x
    • Aguilera I, Melero J, Nuñez-Roldan A, Sanchez B (2001) Molecular structure of eight human autoreactive monoclonal antibodies. Immunology 102: 273-280. (Pubitemid 32281154)
    • (2001) Immunology , vol.102 , Issue.3 , pp. 273-280
    • Aguilera, I.1    Melero, J.2    Nunez-Roldan, A.3    Sanchez, B.4
  • 30
    • 0041689676 scopus 로고    scopus 로고
    • Predominant autoantibody production by early human B cell precursors
    • DOI 10.1126/science.1086907
    • Wardemann H, Yurasov S, Schaefer A, Young JW, Meffre E, et al. (2003) Predominant autoantibody production by early human B cell precursors. Science 301: 1374-1377. doi:10.1126/science.1086907. (Pubitemid 37075812)
    • (2003) Science , vol.301 , Issue.5638 , pp. 1374-1377
    • Wardemann, H.1    Yurasov, S.2    Schaefer, A.3    Young, J.W.4    Meffre, E.5    Nussenzweig, M.C.6
  • 31
    • 0029061664 scopus 로고
    • Heavy chain variable region, light chain variable region, and heavy chain CDR3 influences on the mono- and polyreactivity and on the affinity of human monoclonal rheumatoid factors
    • Crouzier R, Martin T, Pasquali JL (1995) Heavy chain variable region, light chain variable region, and heavy chain CDR3 influences on the mono- and polyreactivity and on the affinity of human monoclonal rheumatoid factors. J Immunol 154: 4526-4535.
    • (1995) J Immunol , vol.154 , pp. 4526-4535
    • Crouzier, R.1    Martin, T.2    Pasquali, J.L.3
  • 33
    • 58849143882 scopus 로고    scopus 로고
    • Regulation of repertoire development through genetic control of DH reading frame preference
    • Zemlin M, Schelonka RL, Ippolito GC, Zemlin C, Zhuang Y, et al. (2008) Regulation of repertoire development through genetic control of DH reading frame preference. J Immunol 181: 8416-8424.
    • (2008) J Immunol , vol.181 , pp. 8416-8424
    • Zemlin, M.1    Schelonka, R.L.2    Ippolito, G.C.3    Zemlin, C.4    Zhuang, Y.5
  • 34
    • 0031916926 scopus 로고    scopus 로고
    • Amino acid insertions and deletions contribute to diversify: The human Ig repertoire
    • DOI 10.1111/j.1600-065X.1998.tb01437.x
    • Wilson PC, Liu YJ, Banchereau J, Capra JD, Pascual V (1998) Amino acid insertions and deletions contribute to diversify the human Ig repertoire. Immunol Rev 162: 143-151. (Pubitemid 28182131)
    • (1998) Immunological Reviews , vol.162 , pp. 143-151
    • Wilson, P.1    Liu, Y.-J.2    Banchereau, J.3    Capra, J.D.4    Pascual, V.5
  • 36
    • 84867742557 scopus 로고    scopus 로고
    • Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity
    • doi:10.1038/gene.2012.28
    • Briney B, Willis JR, Crowe JE (2012) Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity. Genes Immun. doi:10.1038/gene.2012.28.
    • (2012) Genes Immun
    • Briney, B.1    Willis, J.R.2    Crowe, J.E.3
  • 37
    • 79955113580 scopus 로고    scopus 로고
    • An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody
    • doi:10.1128/mBio.00345-10
    • Krause JC, Ekiert DC, Tumpey TM, Smith PB, Wilson IA, et al. (2011) An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody. MBio 2: e00345-10. doi:10.1128/mBio.00345-10.
    • (2011) MBio , vol.2
    • Krause, J.C.1    Ekiert, D.C.2    Tumpey, T.M.3    Smith, P.B.4    Wilson, I.A.5
  • 38
    • 77954920017 scopus 로고    scopus 로고
    • Rational design of envelope identifies broadly neutralizing human monoclonal antibodies to HIV-1
    • doi:10.1126/science.1187659
    • Wu X, Yang Z-Y, Li Y, Hogerkorp C-M, Schief WR, et al. (2010) Rational design of envelope identifies broadly neutralizing human monoclonal antibodies to HIV-1. Science 329: 856-861. doi:10.1126/science.1187659.
    • (2010) Science , vol.329 , pp. 856-861
    • Wu, X.1    Yang, Z.-Y.2    Li, Y.3    Hogerkorp, C.-M.4    Schief, W.R.5
  • 39
    • 80053132436 scopus 로고    scopus 로고
    • Broad neutralization coverage of HIV by multiple highly potent antibodies
    • doi:10.1038/nature10373
    • Walker LM, Huber M, Doores KJ, Falkowska E, Pejchal R, et al. (2011) Broad neutralization coverage of HIV by multiple highly potent antibodies. Nature 477: 466-470. doi:10.1038/nature10373.
    • (2011) Nature , vol.477 , pp. 466-470
    • Walker, L.M.1    Huber, M.2    Doores, K.J.3    Falkowska, E.4    Pejchal, R.5
  • 40
    • 70349887757 scopus 로고    scopus 로고
    • Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target
    • doi:10.1126/science.1178746
    • Walker LM, Phogat SK, Chan-Hui P-Y, Wagner D, Phung P, et al. (2009) Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target. Science 326: 285-289. doi:10.1126/science.1178746.
    • (2009) Science , vol.326 , pp. 285-289
    • Walker, L.M.1    Phogat, S.K.2    Chan-Hui, P.-Y.3    Wagner, D.4    Phung, P.5
  • 42
    • 84874223925 scopus 로고    scopus 로고
    • Molecular deconvolution of the monoclonal antibodies that comprise the polyclonal serum response
    • doi:10.1073/pnas.1213737110
    • Wine Y, Boutz DR, Lavinder JJ, Miklos AE, Hughes RA, et al. (2013) Molecular deconvolution of the monoclonal antibodies that comprise the polyclonal serum response. Proc Natl Acad Sci USA. doi:10.1073/pnas.1213737110.
    • (2013) Proc Natl Acad Sci USA
    • Wine, Y.1    Boutz, D.R.2    Lavinder, J.J.3    Miklos, A.E.4    Hughes, R.A.5


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