메뉴 건너뛰기




Volumn 7, Issue 6, 2014, Pages 1968-1981

Otx2 and Oct4 Drive Early Enhancer Activation during Embryonic Stem Cell Transition from Naive Pluripotency

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; OCTAMER TRANSCRIPTION FACTOR 4; TRANSCRIPTION FACTOR OTX2; OTX2 PROTEIN, MOUSE; POU5F1 PROTEIN, MOUSE; TRANSCRIPTION FACTOR OTX;

EID: 84903473477     PISSN: None     EISSN: 22111247     Source Type: Journal    
DOI: 10.1016/j.celrep.2014.05.037     Document Type: Article
Times cited : (104)

References (39)
  • 1
    • 84870710526 scopus 로고    scopus 로고
    • Otx2 is an intrinsic determinant of the embryonic stem cell state and is required for transition to a stable epiblast stem cell condition
    • Acampora D., Di Giovannantonio L.G., Simeone A. Otx2 is an intrinsic determinant of the embryonic stem cell state and is required for transition to a stable epiblast stem cell condition. Development 2013, 140:43-55.
    • (2013) Development , vol.140 , pp. 43-55
    • Acampora, D.1    Di Giovannantonio, L.G.2    Simeone, A.3
  • 3
    • 84857654411 scopus 로고    scopus 로고
    • Epigenetic control of embryonic stem cell differentiation
    • Armstrong L. Epigenetic control of embryonic stem cell differentiation. Stem Cell Rev. 2012, 8:67-77.
    • (2012) Stem Cell Rev. , vol.8 , pp. 67-77
    • Armstrong, L.1
  • 4
    • 84876328551 scopus 로고    scopus 로고
    • The homeobox gene Otx2 in development and disease
    • Beby F., Lamonerie T. The homeobox gene Otx2 in development and disease. Exp. Eye Res. 2013, 111:9-16.
    • (2013) Exp. Eye Res. , vol.111 , pp. 9-16
    • Beby, F.1    Lamonerie, T.2
  • 6
    • 84876261517 scopus 로고    scopus 로고
    • Exit from pluripotency is gated by intracellular redistribution of the bHLH transcription factor Tfe3
    • Betschinger J., Nichols J., Dietmann S., Corrin P.D., Paddison P.J., Smith A. Exit from pluripotency is gated by intracellular redistribution of the bHLH transcription factor Tfe3. Cell 2013, 153:335-347.
    • (2013) Cell , vol.153 , pp. 335-347
    • Betschinger, J.1    Nichols, J.2    Dietmann, S.3    Corrin, P.D.4    Paddison, P.J.5    Smith, A.6
  • 7
    • 75649139471 scopus 로고    scopus 로고
    • Overlapping promoter targeting by Elk-1 and other divergent ETS-domain transcription factor family members
    • Boros J., O'Donnell A., Donaldson I.J., Kasza A., Zeef L., Sharrocks A.D. Overlapping promoter targeting by Elk-1 and other divergent ETS-domain transcription factor family members. Nucleic Acids Res. 2009, 37:7368-7380.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 7368-7380
    • Boros, J.1    O'Donnell, A.2    Donaldson, I.J.3    Kasza, A.4    Zeef, L.5    Sharrocks, A.D.6
  • 8
    • 84901758151 scopus 로고    scopus 로고
    • The ability of inner-cell-mass cells to self-renew as embryonic stem cells is acquired following epiblast specification
    • Boroviak T., Loos R., Bertone P., Smith A., Nichols J. The ability of inner-cell-mass cells to self-renew as embryonic stem cells is acquired following epiblast specification. Nat. Cell Biol. 2014, 16:516-528.
    • (2014) Nat. Cell Biol. , vol.16 , pp. 516-528
    • Boroviak, T.1    Loos, R.2    Bertone, P.3    Smith, A.4    Nichols, J.5
  • 9
    • 33745611379 scopus 로고    scopus 로고
    • Molecular dissection reveals decreased activity and not dominant negative effect in human OTX2 mutants
    • Chatelain G., Fossat N., Brun G., Lamonerie T. Molecular dissection reveals decreased activity and not dominant negative effect in human OTX2 mutants. J.Mol. Med. 2006, 84:604-615.
    • (2006) J.Mol. Med. , vol.84 , pp. 604-615
    • Chatelain, G.1    Fossat, N.2    Brun, G.3    Lamonerie, T.4
  • 14
    • 77952567987 scopus 로고    scopus 로고
    • Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities
    • Heinz S., Benner C., Spann N., Bertolino E., Lin Y.C., Laslo P., Cheng J.X., Murre C., Singh H., Glass C.K. Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities. Mol. Cell 2010, 38:576-589.
    • (2010) Mol. Cell , vol.38 , pp. 576-589
    • Heinz, S.1    Benner, C.2    Spann, N.3    Bertolino, E.4    Lin, Y.C.5    Laslo, P.6    Cheng, J.X.7    Murre, C.8    Singh, H.9    Glass, C.K.10
  • 16
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B., Trapnell C., Pop M., Salzberg S.L. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 2009, 10:R25.
    • (2009) Genome Biol. , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 17
    • 33845925394 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation and microarray-based analysis of protein location
    • Lee T.I., Johnstone S.E., Young R.A. Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat. Protoc. 2006, 1:729-748.
    • (2006) Nat. Protoc. , vol.1 , pp. 729-748
    • Lee, T.I.1    Johnstone, S.E.2    Young, R.A.3
  • 18
    • 84896120165 scopus 로고    scopus 로고
    • Genetic exploration of the exit from self-renewal using haploid embryonic stem cells
    • Leeb M., Dietmann S., Paramor M., Niwa H., Smith A. Genetic exploration of the exit from self-renewal using haploid embryonic stem cells. Cell Stem Cell 2014, 14:385-393.
    • (2014) Cell Stem Cell , vol.14 , pp. 385-393
    • Leeb, M.1    Dietmann, S.2    Paramor, M.3    Niwa, H.4    Smith, A.5
  • 19
    • 84885187275 scopus 로고    scopus 로고
    • Identification of the missing pluripotency mediator downstream of leukaemia inhibitory factor
    • Martello G., Bertone P., Smith A. Identification of the missing pluripotency mediator downstream of leukaemia inhibitory factor. EMBO J. 2013, 32:2561-2574.
    • (2013) EMBO J. , vol.32 , pp. 2561-2574
    • Martello, G.1    Bertone, P.2    Smith, A.3
  • 23
    • 40849120908 scopus 로고    scopus 로고
    • MAP kinase-mediated c-fos regulation relies on a histone acetylation relay switch
    • O'Donnell A., Yang S.H., Sharrocks A.D. MAP kinase-mediated c-fos regulation relies on a histone acetylation relay switch. Mol. Cell 2008, 29:780-785.
    • (2008) Mol. Cell , vol.29 , pp. 780-785
    • O'Donnell, A.1    Yang, S.H.2    Sharrocks, A.D.3
  • 25
    • 77953973940 scopus 로고    scopus 로고
    • Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes
    • Pasini D., Malatesta M., Jung H.R., Walfridsson J., Willer A., Olsson L., Skotte J., Wutz A., Porse B., Jensen O.N., Helin K. Characterization of an antagonistic switch between histone H3 lysine 27 methylation and acetylation in the transcriptional regulation of Polycomb group target genes. Nucleic Acids Res. 2010, 38:4958-4969.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 4958-4969
    • Pasini, D.1    Malatesta, M.2    Jung, H.R.3    Walfridsson, J.4    Willer, A.5    Olsson, L.6    Skotte, J.7    Wutz, A.8    Porse, B.9    Jensen, O.N.10    Helin, K.11
  • 26
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: a flexible suite of utilities for comparing genomic features
    • Quinlan A.R., Hall I.M. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 2010, 26:841-842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 27
    • 84878579948 scopus 로고    scopus 로고
    • A defined Oct4 level governs cell state transitions of pluripotency entry and differentiation into all embryonic lineages
    • Radzisheuskaya A., Chia Gle.B., dos Santos R.L., Theunissen T.W., Castro L.F., Nichols J., Silva J.C. A defined Oct4 level governs cell state transitions of pluripotency entry and differentiation into all embryonic lineages. Nat. Cell Biol. 2013, 15:579-590.
    • (2013) Nat. Cell Biol. , vol.15 , pp. 579-590
    • Radzisheuskaya, A.1    Chia, G.2    dos Santos, R.L.3    Theunissen, T.W.4    Castro, L.F.5    Nichols, J.6    Silva, J.C.7
  • 29
    • 84861733509 scopus 로고    scopus 로고
    • Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA
    • Simon J.M., Giresi P.G., Davis I.J., Lieb J.D. Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA. Nat. Protoc. 2012, 7:256-267.
    • (2012) Nat. Protoc. , vol.7 , pp. 256-267
    • Simon, J.M.1    Giresi, P.G.2    Davis, I.J.3    Lieb, J.D.4
  • 30
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth G.K. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 2004, 3:e3.
    • (2004) Stat. Appl. Genet. Mol. Biol. , vol.3
    • Smyth, G.K.1
  • 31
    • 79958263080 scopus 로고    scopus 로고
    • Pluripotency factors in embryonic stem cells regulate differentiation into germ layers
    • Thomson M., Liu S.J., Zou L.N., Smith Z., Meissner A., Ramanathan S. Pluripotency factors in embryonic stem cells regulate differentiation into germ layers. Cell 2011, 145:875-889.
    • (2011) Cell , vol.145 , pp. 875-889
    • Thomson, M.1    Liu, S.J.2    Zou, L.N.3    Smith, Z.4    Meissner, A.5    Ramanathan, S.6
  • 35
    • 84872028640 scopus 로고    scopus 로고
    • A genome-wide RNAi screen reveals MAP kinase phosphatases as key ERK pathway regulators during embryonic stem cell differentiation
    • Yang S.H., Kalkan T., Morrisroe C., Smith A., Sharrocks A.D. A genome-wide RNAi screen reveals MAP kinase phosphatases as key ERK pathway regulators during embryonic stem cell differentiation. PLoS Genet. 2012, 8:e1003112.
    • (2012) PLoS Genet. , vol.8
    • Yang, S.H.1    Kalkan, T.2    Morrisroe, C.3    Smith, A.4    Sharrocks, A.D.5
  • 37
    • 79952660821 scopus 로고    scopus 로고
    • Control of the embryonic stem cell state
    • Young R.A. Control of the embryonic stem cell state. Cell 2011, 144:940-954.
    • (2011) Cell , vol.144 , pp. 940-954
    • Young, R.A.1
  • 38
    • 80455144479 scopus 로고    scopus 로고
    • Pioneer transcription factors: establishing competence for gene expression
    • Zaret K.S., Carroll J.S. Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 2011, 25:2227-2241.
    • (2011) Genes Dev. , vol.25 , pp. 2227-2241
    • Zaret, K.S.1    Carroll, J.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.