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Volumn 5, Issue 1, 2014, Pages

Processed pseudogene insertions in somatic cells

Author keywords

Cancer; Chronic granulomatous disease; L1 retrotransposons; Polymorphism; Processed pseudogenes

Indexed keywords

MESSENGER RNA;

EID: 84903401683     PISSN: None     EISSN: 17598753     Source Type: Journal    
DOI: 10.1186/1759-8753-5-20     Document Type: Review
Times cited : (34)

References (38)
  • 1
    • 0346752110 scopus 로고    scopus 로고
    • Millions of years of evolution preserved: A comprehensive catalog of the processed pseudogenes in the human genome
    • 14656962
    • Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome. Zhang Z, Harrison PM, Liu Y, Gerstein M, Genome Res 2003 13 2541 2558 10.1101/gr.1429003 14656962
    • (2003) Genome Res , vol.13 , pp. 2541-2558
    • Zhang, Z.1    Harrison, P.M.2    Liu, Y.3    Gerstein, M.4
  • 3
    • 0022221496 scopus 로고
    • Recombination within the human embryonic ζ-globin locus: A common ζ - ζomosome produced by gene conversion of the genζe
    • 2996777
    • Recombination within the human embryonic ζ-globin locus: a common ζ-ζ chromosome produced by gene conversion of the ζ gene. Hill AV, Nicholls RD, Thein SL, Higgs DH, Cell 1985 42 809 819 10.1016/0092-8674(85)90277-6 2996777
    • (1985) Cell , vol.42 , pp. 809-819
    • Hill, A.V.1    Nicholls, R.D.2    Thein, S.L.3    Higgs, D.H.4
  • 4
    • 0017693139 scopus 로고
    • A pseudogene structure in 5S DNA of Xenopus laevis
    • 561661
    • A pseudogene structure in 5S DNA of Xenopus laevis. Jacq C, Miller JR, Brownlee GG, Cell 1977 12 109 120 10.1016/0092-8674(77)90189-1 561661
    • (1977) Cell , vol.12 , pp. 109-120
    • Jacq, C.1    Miller, J.R.2    Brownlee, G.G.3
  • 5
    • 0022293979 scopus 로고
    • Processed pseudogenes: Characteristics and evolution
    • 3909943
    • Processed pseudogenes: characteristics and evolution. Vanin EF, Annu Rev Genet 1985 19 253 272 10.1146/annurev.ge.19.120185.001345 3909943
    • (1985) Annu Rev Genet , vol.19 , pp. 253-272
    • Vanin, E.F.1
  • 6
    • 0034079713 scopus 로고    scopus 로고
    • Human LINE retrotransposons generate processed pseudogenes
    • 10742098
    • Human LINE retrotransposons generate processed pseudogenes. Esnault C, Maestre J, Heidmann T, Nat Genet 2000 24 363 367 10.1038/74184 10742098
    • (2000) Nat Genet , vol.24 , pp. 363-367
    • Esnault, C.1    Maestre, J.2    Heidmann, T.3
  • 8
    • 0036849412 scopus 로고    scopus 로고
    • LINEs mobilize SINEs in the eel through a shared 3' sequence
    • 12419252
    • LINEs mobilize SINEs in the eel through a shared 3' sequence. Kajikawa M, Okada N, Cell 2002 111 433 444 10.1016/S0092-8674(02)01041-3 12419252
    • (2002) Cell , vol.111 , pp. 433-444
    • Kajikawa, M.1    Okada, N.2
  • 9
    • 0041353551 scopus 로고    scopus 로고
    • LINE-mediated retrotransposition of marked Alu sequences
    • 12897783
    • LINE-mediated retrotransposition of marked Alu sequences. Dewannieux M, Esnault C, Heidmann T, Nat Genet 2003 35 41 48 10.1038/ng1223 12897783
    • (2003) Nat Genet , vol.35 , pp. 41-48
    • Dewannieux, M.1    Esnault, C.2    Heidmann, T.3
  • 10
    • 80051702066 scopus 로고    scopus 로고
    • Retrotransposition of marked SVA elements by human L1s in cultured cells
    • 21636526
    • Retrotransposition of marked SVA elements by human L1s in cultured cells. Hancks DC, Goodier JL, Mandal PK, Cheung LE, Kazazian HH Jr, Hum Mol Genet 2011 20 3386 3400 10.1093/hmg/ddr245 21636526
    • (2011) Hum Mol Genet , vol.20 , pp. 3386-3400
    • Hancks, D.C.1    Goodier, J.L.2    Mandal, P.K.3    Cheung, L.E.4    Kazazian, H.H.5
  • 12
    • 23844510228 scopus 로고    scopus 로고
    • Multiple fates of L1 retrotransposition intermediates in cultured human cells
    • 16107723
    • Multiple fates of L1 retrotransposition intermediates in cultured human cells. Gilbert N, Lutz S, Morrish TA, Moran JV, Mol Cell Biol 2005 25 7780 7795 10.1128/MCB.25.17.7780-7795.2005 16107723
    • (2005) Mol Cell Biol , vol.25 , pp. 7780-7795
    • Gilbert, N.1    Lutz, S.2    Morrish, T.A.3    Moran, J.V.4
  • 13
    • 18844365062 scopus 로고    scopus 로고
    • L1-mediated retrotransposition of murine B1 and B2 SINEs recapitulated in cultured cells
    • L1-mediated retrotransposition of murine B1 and B2 SINEs recapitulated in cultured cells. Dewannieux M, Heidmann T, J Mol Biol 2005 349 241 247 10.1016/j.jmb.2005.03.068 15890192
    • (2005) J Mol Biol , vol.349 , pp. 241-247
    • Dewannieux, M.1    Heidmann, T.2
  • 15
    • 0023091937 scopus 로고
    • Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene
    • 3453121
    • Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene. McCarrey JR, Thomas K, Nature 1987 326 501 505 10.1038/326501a0 3453121
    • (1987) Nature , vol.326 , pp. 501-505
    • McCarrey, J.R.1    Thomas, K.2
  • 18
    • 3242876747 scopus 로고    scopus 로고
    • Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1
    • 15243629
    • Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1. Sayah DM, Sokolskaja E, Berthoux L, Luban J, Nature 2004 430 569 573 10.1038/nature02777 15243629
    • (2004) Nature , vol.430 , pp. 569-573
    • Sayah, D.M.1    Sokolskaja, E.2    Berthoux, L.3    Luban, J.4
  • 19
    • 42149101112 scopus 로고    scopus 로고
    • Independent genesis of chimeric TRIM5-cyclophilin proteins in two primate species
    • 18287034
    • Independent genesis of chimeric TRIM5-cyclophilin proteins in two primate species. Virgen CA, Kratovac Z, Bieniasz PD, Hatziioannou T, Proc Natl Acad Sci U S A 2008 105 3563 3568 10.1073/pnas.0709258105 18287034
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 3563-3568
    • Virgen, C.A.1    Kratovac, Z.2    Bieniasz, P.D.3    Hatziioannou, T.4
  • 23
    • 0034760666 scopus 로고    scopus 로고
    • Characterization of a novel active L1 retrotransposon subfamily in the mouse
    • Characterization of a novel active L1 retrotransposon subfamily in the mouse. Goodier JL, Ostertag EM, Du K, Kazazian HH Jr, Genome Res 2001 11 1677 1685 10.1101/gr.198301 11591644
    • (2001) Genome Res , vol.11 , pp. 1677-1685
    • Goodier, J.L.1    Ostertag, E.M.2    Du, K.3    Kazazian, H.H.4
  • 25
    • 84890474385 scopus 로고    scopus 로고
    • Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division
    • 24026178 Genomes Project Consortium 1
    • Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division. Abyzov A, Iskow R, Gokcumen O, Radke DW, Balasubramanian S, Pei B, Habegger L, Lee C, Gerstein M, 1000 Genomes Project Consortium, Genome Res 2013 23 2042 2052 10.1101/gr.154625.113 24026178
    • (2013) Genome Res , vol.23 , pp. 2042-2052
    • Abyzov, A.1    Iskow, R.2    Gokcumen, O.3    Radke, D.W.4    Balasubramanian, S.5    Pei, B.6    Habegger, L.7    Lee, C.8    Gerstein, M.9
  • 27
    • 84897963507 scopus 로고    scopus 로고
    • Diversity through duplication: Whole-genome sequencing reveals novel gene retrocopies in the human population
    • 24615986
    • Diversity through duplication: whole-genome sequencing reveals novel gene retrocopies in the human population. Richardson SR, Salvador-Palomeque C, Faulkner GJ, Bioessays 2014 36 475 481 10.1002/bies.201300181 24615986
    • (2014) Bioessays , vol.36 , pp. 475-481
    • Richardson, S.R.1    Salvador-Palomeque, C.2    Faulkner, G.J.3
  • 29
    • 0035208118 scopus 로고    scopus 로고
    • Twin priming: A proposed mechanism for the creation of inversions in L1 retrotransposition
    • 11731496
    • Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition. Ostertag EM, Kazazian HH Jr, Genome Res 2001 11 2059 2065 10.1101/gr.205701 11731496
    • (2001) Genome Res , vol.11 , pp. 2059-2065
    • Ostertag, E.M.1    Kazazian, H.H.2
  • 32
    • 84862507347 scopus 로고    scopus 로고
    • Active human retrotransposons: Variation and disease
    • 22406018
    • Active human retrotransposons: variation and disease. Hancks DC, Kazazian HH Jr, Curr Opin Genet Dev 2012 22 191 203 10.1016/j.gde.2012.02.006 22406018
    • (2012) Curr Opin Genet Dev , vol.22 , pp. 191-203
    • Hancks, D.C.1    Kazazian, H.H.2
  • 35
    • 0023867459 scopus 로고
    • A novel mechanism of mutation in man: Haemophilia A due to de novo insertion of L1 sequences
    • A novel mechanism of mutation in man: haemophilia A due to de novo insertion of L1 sequences. Kazazian HH Jr, Wong C, Youssoufian H, Scott AF, Phillips D, Antonarakis SE, Nature 1988 332 164 166 10.1038/332164a0 2831458
    • (1988) Nature , vol.332 , pp. 164-166
    • Kazazian, H.H.1    Wong, C.2    Youssoufian, H.3    Scott, A.F.4    Phillips, D.5    Antonarakis, S.E.6
  • 37
    • 84883018856 scopus 로고    scopus 로고
    • Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles
    • 23696454
    • Enrichment of processed pseudogene transcripts in L1-ribonucleoprotein particles. Mandal PK, Ewing AD, Hancks DC, Kazazian HH Jr, Hum Mol Genet 2013 22 3730 3748 10.1093/hmg/ddt225 23696454
    • (2013) Hum Mol Genet , vol.22 , pp. 3730-3748
    • Mandal, P.K.1    Ewing, A.D.2    Hancks, D.C.3    Kazazian, H.H.4
  • 38
    • 33745864020 scopus 로고    scopus 로고
    • Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles
    • Cis-preferential LINE-1 reverse transcriptase activity in ribonucleoprotein particles. Kulpa DA, Moran JV, Nat Struct Mol Biol 2006 13 655 660 10.1038/nsmb1107 16783376
    • (2006) Nat Struct Mol Biol , vol.13 , pp. 655-660
    • Kulpa, D.A.1    Moran, J.V.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.