메뉴 건너뛰기




Volumn 79, Issue 1, 2014, Pages 67-81

The chromatin landscape of the moss Physcomitrella patens and its dynamics during development and drought stress

Author keywords

ChIP seq; chromatin; development; drought; epigenomics; H3K27; histone H3; histone modifications; Physcomitrella patens

Indexed keywords

CHEMICAL ACTIVATION; GENES;

EID: 84903267708     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/tpj.12542     Document Type: Article
Times cited : (74)

References (62)
  • 1
    • 0001383199 scopus 로고
    • Analysis of gametophytic development in the moss, Physcomitrella patens, using auxin and cytokinin resistant mutants
    • Ashton, N.W., Grimsley, N.H., and, Cove, D.J., (1979) Analysis of gametophytic development in the moss, Physcomitrella patens, using auxin and cytokinin resistant mutants. Planta, 144 (5), 427-435.
    • (1979) Planta , vol.144 , Issue.5 , pp. 427-435
    • Ashton, N.W.1    Grimsley, N.H.2    Cove, D.J.3
  • 2
    • 84869490647 scopus 로고    scopus 로고
    • Dynamic regulation of Polycomb group activity during plant development
    • Bemer, M., and, Grossniklaus, U., (2012) Dynamic regulation of Polycomb group activity during plant development. Curr. Opin. Plant Biol. 15 (5), 523-529.
    • (2012) Curr. Opin. Plant Biol. , vol.15 , Issue.5 , pp. 523-529
    • Bemer, M.1    Grossniklaus, U.2
  • 3
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., and, Hochberg, Y., (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. Series B, 57, 289-300.
    • (1995) J. R. Stat. Soc. Series B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 4
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • Berger, S.L., (2007) The complex language of chromatin regulation during transcription. Nature, 447 (7143), 407-412.
    • (2007) Nature , vol.447 , Issue.7143 , pp. 407-412
    • Berger, S.L.1
  • 6
    • 84856239091 scopus 로고    scopus 로고
    • Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development
    • Bonn, S., Zinzen, R.P., Girardot, C., et al. (2012) Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development. Nat. Genet. 44 (2), 148-156.
    • (2012) Nat. Genet. , vol.44 , Issue.2 , pp. 148-156
    • Bonn, S.1    Zinzen, R.P.2    Girardot, C.3
  • 8
    • 79953754165 scopus 로고    scopus 로고
    • Polycomb repressive complex 2 controls the embryo-to-seedling phase transition
    • Bouyer, D., Roudier, F., Heese, M., et al. (2011) Polycomb repressive complex 2 controls the embryo-to-seedling phase transition. PLoS Genet. 7 (3), e1002014.
    • (2011) PLoS Genet. , vol.7 , Issue.3
    • Bouyer, D.1    Roudier, F.2    Heese, M.3
  • 10
    • 79961210109 scopus 로고    scopus 로고
    • Polycomb-group mediated epigenetic mechanisms through plant evolution
    • Butenko, Y., and, Ohad, N., (2011) Polycomb-group mediated epigenetic mechanisms through plant evolution. Biochim. Biophys. Acta, 1809 (8), 395-406.
    • (2011) Biochim. Biophys. Acta , vol.1809 , Issue.8 , pp. 395-406
    • Butenko, Y.1    Ohad, N.2
  • 11
    • 75649129700 scopus 로고    scopus 로고
    • Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis
    • Charron, J.-B.F., He, H., Elling, A.A., and, Deng, X.W., (2009) Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis. Plant Cell, 21 (12), 3732-3748.
    • (2009) Plant Cell , vol.21 , Issue.12 , pp. 3732-3748
    • Charron, J.-B.F.1    He, H.2    Elling, A.A.3    Deng, X.W.4
  • 12
    • 0035313211 scopus 로고    scopus 로고
    • Computational methods for gene annotation: The Arabidopsis genome
    • Cho, Y., and, Walbot, V., (2001) Computational methods for gene annotation: the Arabidopsis genome. Curr. Opin. Biotechnol. 12, 126-130.
    • (2001) Curr. Opin. Biotechnol. , vol.12 , pp. 126-130
    • Cho, Y.1    Walbot, V.2
  • 13
    • 29444435089 scopus 로고    scopus 로고
    • The moss Physcomitrella patens
    • Cove, D., (2005) The moss Physcomitrella patens. Annu. Rev. Genet. 39, 339-358.
    • (2005) Annu. Rev. Genet. , vol.39 , pp. 339-358
    • Cove, D.1
  • 14
    • 78650758676 scopus 로고    scopus 로고
    • Histone H3K27ac separates active from poised enhancers and predicts developmental state
    • Creyghton, M.P., Cheng, A.W., Welstead, G.G., et al. (2010) Histone H3K27ac separates active from poised enhancers and predicts developmental state. Proc. Natl Acad. Sci. USA, 107 (50), 21931-21936.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , Issue.50 , pp. 21931-21936
    • Creyghton, M.P.1    Cheng, A.W.2    Welstead, G.G.3
  • 15
    • 77955967051 scopus 로고    scopus 로고
    • A simple method for gene expression and chromatin profiling of individual cell types within a tissue
    • Deal, R.B., and, Henikoff, S., (2010) A simple method for gene expression and chromatin profiling of individual cell types within a tissue. Dev. Cell, 18 (6), 1030-1040.
    • (2010) Dev. Cell , vol.18 , Issue.6 , pp. 1030-1040
    • Deal, R.B.1    Henikoff, S.2
  • 16
    • 78049400268 scopus 로고    scopus 로고
    • Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana
    • van Dijk, K., Ding, Y., Malkaram, S., et al. (2010) Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana. BMC Plant Biol. 10 (1), 238.
    • (2010) BMC Plant Biol. , vol.10 , Issue.1 , pp. 238
    • Van Dijk, K.1    Ding, Y.2    Malkaram, S.3
  • 17
    • 84865790047 scopus 로고    scopus 로고
    • An integrated encyclopedia of DNA elements in the human genome
    • Dunham, I., Kundaje, A., Aldred, S.F., et al. (2012) An integrated encyclopedia of DNA elements in the human genome. Nature, 489 (7414), 57-74.
    • (2012) Nature , vol.489 , Issue.7414 , pp. 57-74
    • Dunham, I.1    Kundaje, A.2    Aldred, S.F.3
  • 18
    • 78650747491 scopus 로고    scopus 로고
    • Discovery and characterization of chromatin states for systematic annotation of the human genome
    • Ernst, J., and, Kellis, M., (2010) Discovery and characterization of chromatin states for systematic annotation of the human genome. Nat. Biotechnol. 28 (8), 817-825.
    • (2010) Nat. Biotechnol. , vol.28 , Issue.8 , pp. 817-825
    • Ernst, J.1    Kellis, M.2
  • 19
    • 78049414227 scopus 로고    scopus 로고
    • Epigenetic reprogramming in plant and animal development
    • Feng, S., Jacobsen, S.E., and, Reik, W., (2010) Epigenetic reprogramming in plant and animal development. Science, 330 (6004), 622-627.
    • (2010) Science , vol.330 , Issue.6004 , pp. 622-627
    • Feng, S.1    Jacobsen, S.E.2    Reik, W.3
  • 20
    • 77957776228 scopus 로고    scopus 로고
    • Systematic protein location mapping reveals five principal chromatin types in Drosophila cells
    • Filion, G.J., van Bemmel, J.G., Braunschweig, U., et al. (2010) Systematic protein location mapping reveals five principal chromatin types in Drosophila cells. Cell, 143 (2), 212-224.
    • (2010) Cell , vol.143 , Issue.2 , pp. 212-224
    • Filion, G.J.1    Van Bemmel, J.G.2    Braunschweig, U.3
  • 21
    • 33847076248 scopus 로고    scopus 로고
    • Chromatin challenges during DNA replication and repair
    • Groth, A., Rocha, W., Verreault, A., and, Almouzni, G., (2007) Chromatin challenges during DNA replication and repair. Cell, 128 (4), 721-733.
    • (2007) Cell , vol.128 , Issue.4 , pp. 721-733
    • Groth, A.1    Rocha, W.2    Verreault, A.3    Almouzni, G.4
  • 22
    • 80053622239 scopus 로고    scopus 로고
    • Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency
    • Hawkins, R.D., Hon, G.C., Yang, C., et al. (2011) Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency. Cell Res. 21 (10), 1393-1409.
    • (2011) Cell Res. , vol.21 , Issue.10 , pp. 1393-1409
    • Hawkins, R.D.1    Hon, G.C.2    Yang, C.3
  • 23
    • 77950346035 scopus 로고    scopus 로고
    • Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids
    • He, G., Zhu, X., Elling, A.A., et al. (2010) Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids. Plant Cell, 22 (1), 17-33.
    • (2010) Plant Cell , vol.22 , Issue.1 , pp. 17-33
    • He, G.1    Zhu, X.2    Elling, A.A.3
  • 24
    • 69449097106 scopus 로고    scopus 로고
    • Diversity of Polycomb group complexes in plants: Same rules, different players?
    • Hennig, L., and, Derkacheva, M., (2009) Diversity of Polycomb group complexes in plants: same rules, different players? Trends Genet. 25 (9), 414-423.
    • (2009) Trends Genet. , vol.25 , Issue.9 , pp. 414-423
    • Hennig, L.1    Derkacheva, M.2
  • 25
    • 84868568378 scopus 로고    scopus 로고
    • Cold stress selectively unsilences tandem repeats in heterochromatin associated with accumulation of H3K9ac
    • Hu, Y., Zhang, L., He, S., et al. (2012) Cold stress selectively unsilences tandem repeats in heterochromatin associated with accumulation of H3K9ac. Plant Cell Environ. 35 (12), 2130-2142.
    • (2012) Plant Cell Environ. , vol.35 , Issue.12 , pp. 2130-2142
    • Hu, Y.1    Zhang, L.2    He, S.3
  • 26
    • 33845653228 scopus 로고    scopus 로고
    • The mechanism of gene targeting in Physcomitrella patens: Homologous recombination, concatenation and multiple integration
    • Kamisugi, Y., Schlink, K., Rensing, S.A., Schween, G., von Stackelberg, M., Cuming, A.C., Reski, R., and, Cove David, J., (2006) The mechanism of gene targeting in Physcomitrella patens: homologous recombination, concatenation and multiple integration. Nucleic Acids Res. 34 (21), 6205-6214.
    • (2006) Nucleic Acids Res. , vol.34 , Issue.21 , pp. 6205-6214
    • Kamisugi, Y.1    Schlink, K.2    Rensing, S.A.3    Schween, G.4    Von Stackelberg, M.5    Cuming, A.C.6    Reski, R.7    Cove David, J.8
  • 27
    • 79953060951 scopus 로고    scopus 로고
    • Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
    • Kharchenko, P.V., Alekseyenko, A.A., Schwartz, Y.B., et al. (2011) Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. Nature, 471 (7339), 480-485.
    • (2011) Nature , vol.471 , Issue.7339 , pp. 480-485
    • Kharchenko, P.V.1    Alekseyenko, A.A.2    Schwartz, Y.B.3
  • 28
    • 54149108452 scopus 로고    scopus 로고
    • Alterations of lysine modifications on the histone H3N-tail under drought stress conditions in Arabidopsis thaliana
    • Kim, J.-M., To, T.K., Ishida, J., et al. (2008) Alterations of lysine modifications on the histone H3N-tail under drought stress conditions in Arabidopsis thaliana. Plant Cell Physiol. 49 (10), 1580-1588.
    • (2008) Plant Cell Physiol. , vol.49 , Issue.10 , pp. 1580-1588
    • Kim, J.-M.1    To, T.K.2    Ishida, J.3
  • 29
    • 42749083114 scopus 로고    scopus 로고
    • Programming of gene expression by Polycomb group proteins
    • Köhler, C., and, Villar, C.B.R., (2008) Programming of gene expression by Polycomb group proteins. Trends Cell Biol. 18 (5), 236-243.
    • (2008) Trends Cell Biol. , vol.18 , Issue.5 , pp. 236-243
    • Köhler, C.1    Villar, C.B.R.2
  • 30
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides, T., (2007) Chromatin modifications and their function. Cell, 128 (4), 693-705.
    • (2007) Cell , vol.128 , Issue.4 , pp. 693-705
    • Kouzarides, T.1
  • 31
    • 79955586204 scopus 로고    scopus 로고
    • Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation
    • Lafos, M., Kroll, P., Hohenstatt, M.L., Thorpe, F.L., Clarenz, O., and, Schubert, D., (2011) Dynamic regulation of H3K27 trimethylation during Arabidopsis differentiation. PLoS Genet. 7 (4), e1002040.
    • (2011) PLoS Genet. , vol.7 , Issue.4
    • Lafos, M.1    Kroll, P.2    Hohenstatt, M.L.3    Thorpe, F.L.4    Clarenz, O.5    Schubert, D.6
  • 32
    • 77956153243 scopus 로고    scopus 로고
    • The language of histone crosstalk
    • Lee, J.-S., Smith, E., and, Shilatifard, A., (2010) The language of histone crosstalk. Cell, 142 (5), 682-685.
    • (2010) Cell , vol.142 , Issue.5 , pp. 682-685
    • Lee, J.-S.1    Smith, E.2    Shilatifard, A.3
  • 33
    • 33847070442 scopus 로고    scopus 로고
    • The role of chromatin during transcription
    • Li, B., Carey, M., and, Workman, J.L., (2007) The role of chromatin during transcription. Cell, 128 (4), 707-719.
    • (2007) Cell , vol.128 , Issue.4 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 34
    • 84862732690 scopus 로고    scopus 로고
    • New insights into nucleosome and chromatin structure: An ordered state or a disordered affair?
    • Luger, K., Dechassa, M.L., and, Tremethick, D.J., (2012) New insights into nucleosome and chromatin structure: an ordered state or a disordered affair? Nat. Rev. Mol. Cell Biol. 13 (7), 436-447.
    • (2012) Nat. Rev. Mol. Cell Biol. , vol.13 , Issue.7 , pp. 436-447
    • Luger, K.1    Dechassa, M.L.2    Tremethick, D.J.3
  • 35
    • 77954434420 scopus 로고    scopus 로고
    • ANCORP: A high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets
    • Luo, C., and, Lam, E., (2010) ANCORP: a high-resolution approach that generates distinct chromatin state models from multiple genome-wide datasets. Plant J. 63 (2), 339-351.
    • (2010) Plant J. , vol.63 , Issue.2 , pp. 339-351
    • Luo, C.1    Lam, E.2
  • 36
    • 84871967979 scopus 로고    scopus 로고
    • Integrative analysis of chromatin states in Arabidopsis identified potential regulatory mechanisms for natural antisense transcript production
    • Luo, C., Sidote, D.J., Zhang, Yi., Kerstetter, R.A., Michael, T.P., and, Lam, E., (2013) Integrative analysis of chromatin states in Arabidopsis identified potential regulatory mechanisms for natural antisense transcript production. Plant J. 73 (1), 77-90.
    • (2013) Plant J. , vol.73 , Issue.1 , pp. 77-90
    • Luo, C.1    Sidote, D.J.2    Zhang, Yi.3    Kerstetter, R.A.4    Michael, T.P.5    Lam, E.6
  • 37
    • 77954758157 scopus 로고    scopus 로고
    • Polycomb group protein-mediated repression of transcription
    • Morey, L., and, Helin, K., (2010) Polycomb group protein-mediated repression of transcription. Trends Biochem. Sci. 35 (6), 323-332.
    • (2010) Trends Biochem. Sci. , vol.35 , Issue.6 , pp. 323-332
    • Morey, L.1    Helin, K.2
  • 38
    • 69449106863 scopus 로고    scopus 로고
    • Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution
    • Mosquna, A., Katz, A., Decker, E.L., Rensing, S.A., Reski, R., and, Ohad, N., (2009) Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution. Development, 136 (14), 2433-2444.
    • (2009) Development , vol.136 , Issue.14 , pp. 2433-2444
    • Mosquna, A.1    Katz, A.2    Decker, E.L.3    Rensing, S.A.4    Reski, R.5    Ohad, N.6
  • 39
    • 70349507539 scopus 로고    scopus 로고
    • A Polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution
    • Okano, Y., Aono, N., Hiwatashi, Y., Murata, T., Nishiyama, T., Ishikawa, T., Kubo, M., and, Hasebe, M., (2009) A Polycomb repressive complex 2 gene regulates apogamy and gives evolutionary insights into early land plant evolution. Proc. Natl Acad. Sci. USA, 106 (38), 16321-16326.
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , Issue.38 , pp. 16321-16326
    • Okano, Y.1    Aono, N.2    Hiwatashi, Y.3    Murata, T.4    Nishiyama, T.5    Ishikawa, T.6    Kubo, M.7    Hasebe, M.8
  • 40
    • 41749108163 scopus 로고    scopus 로고
    • Stem cell regulation by Polycomb repressors: Postponing commitment
    • Pietersen, A.M., and, van Lohuizen, M., (2008) Stem cell regulation by Polycomb repressors: postponing commitment. Curr. Opin. Cell Biol. 20 (2), 201-207.
    • (2008) Curr. Opin. Cell Biol. , vol.20 , Issue.2 , pp. 201-207
    • Pietersen, A.M.1    Van Lohuizen, M.2
  • 41
    • 78049342369 scopus 로고    scopus 로고
    • Evolutionary crossroads in developmental biology: Physcomitrella patens
    • Prigge, M.J., and, Bezanilla, M., (2010) Evolutionary crossroads in developmental biology: Physcomitrella patens. Development, 137 (21), 3535-3543.
    • (2010) Development , vol.137 , Issue.21 , pp. 3535-3543
    • Prigge, M.J.1    Bezanilla, M.2
  • 42
    • 79951516056 scopus 로고    scopus 로고
    • A unique chromatin signature uncovers early developmental enhancers in humans
    • Rada-Iglesias, A., Bajpai, R., Swigut, T., Brugmann, S.A., Flynn, R.A., and, Wysocka, J., (2011) A unique chromatin signature uncovers early developmental enhancers in humans. Nature, 470 (7333), 279-283.
    • (2011) Nature , vol.470 , Issue.7333 , pp. 279-283
    • Rada-Iglesias, A.1    Bajpai, R.2    Swigut, T.3    Brugmann, S.A.4    Flynn, R.A.5    Wysocka, J.6
  • 43
    • 84860371870 scopus 로고    scopus 로고
    • Combinatorial complexity in chromatin structure and function: Revisiting the histone code
    • Rando, O.J., (2012) Combinatorial complexity in chromatin structure and function: revisiting the histone code. Curr. Opin. Genet. Dev. 22 (2), 148-155.
    • (2012) Curr. Opin. Genet. Dev. , vol.22 , Issue.2 , pp. 148-155
    • Rando, O.J.1
  • 44
    • 37849032457 scopus 로고    scopus 로고
    • The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants
    • Rensing, S.A., Lang, D., Zimmer, A.D., et al. (2008) The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science, 319 (5859), 64-69.
    • (2008) Science , vol.319 , Issue.5859 , pp. 64-69
    • Rensing, S.A.1    Lang, D.2    Zimmer, A.D.3
  • 45
    • 29544445027 scopus 로고    scopus 로고
    • Chromatin modifiers that control plant development
    • Reyes, J.C., (2006) Chromatin modifiers that control plant development. Curr. Opin. Plant Biol. 9 (1), 21-27.
    • (2006) Curr. Opin. Plant Biol. , vol.9 , Issue.1 , pp. 21-27
    • Reyes, J.C.1
  • 46
    • 79551575925 scopus 로고    scopus 로고
    • Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin
    • Riddle, N.C., Minoda, A., Kharchenko, P.V., et al. (2011) Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin. Genome Res. 21 (2), 147-163.
    • (2011) Genome Res. , vol.21 , Issue.2 , pp. 147-163
    • Riddle, N.C.1    Minoda, A.2    Kharchenko, P.V.3
  • 47
    • 70350225295 scopus 로고    scopus 로고
    • Chromatin indexing in Arabidopsis: An epigenomic tale of tails and more
    • Roudier, F., Teixeira, F.K., and, Colot, V., (2009) Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more. Trends Genet. 25 (11), 511-517.
    • (2009) Trends Genet. , vol.25 , Issue.11 , pp. 511-517
    • Roudier, F.1    Teixeira, F.K.2    Colot, V.3
  • 48
    • 79956066320 scopus 로고    scopus 로고
    • Integrative epigenomic mapping defines four main chromatin states in Arabidopsis
    • Roudier, F., Ahmed, I., Bérard, C., et al. (2011) Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J. 30 (10), 1928-1938.
    • (2011) EMBO J. , vol.30 , Issue.10 , pp. 1928-1938
    • Roudier, F.1    Ahmed, I.2    Bérard, C.3
  • 49
    • 84878894271 scopus 로고    scopus 로고
    • Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome
    • Sani, E., Herzyk, P., Perrella, G., Colot, V., and, Amtmann, A., (2013) Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome. Genome Biol. 14 (6), R59.
    • (2013) Genome Biol. , vol.14 , Issue.6
    • Sani, E.1    Herzyk, P.2    Perrella, G.3    Colot, V.4    Amtmann, A.5
  • 50
    • 70350149728 scopus 로고    scopus 로고
    • Recruitment of Polycomb group complexes and their role in the dynamic regulation of cell fate choice
    • Schuettengruber, B., and, Cavalli, G., (2009) Recruitment of Polycomb group complexes and their role in the dynamic regulation of cell fate choice. Development, 136 (21), 3531-3542.
    • (2009) Development , vol.136 , Issue.21 , pp. 3531-3542
    • Schuettengruber, B.1    Cavalli, G.2
  • 51
    • 70349469565 scopus 로고    scopus 로고
    • Mechanisms of Polycomb gene silencing: Knowns and unknowns
    • Simon, J.A., and, Kingston, R.E., (2009) Mechanisms of Polycomb gene silencing: knowns and unknowns. Nat. Rev. Mol. Cell Biol. 10 (10), 697-708.
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , Issue.10 , pp. 697-708
    • Simon, J.A.1    Kingston, R.E.2
  • 52
    • 84859530737 scopus 로고    scopus 로고
    • Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling
    • Steiner, F.A., Talbert, P.B., Kasinathan, S., Deal, R.B., and, Henikoff, S., (2012) Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling. Genome Res. 22 (4), 766-777.
    • (2012) Genome Res. , vol.22 , Issue.4 , pp. 766-777
    • Steiner, F.A.1    Talbert, P.B.2    Kasinathan, S.3    Deal, R.B.4    Henikoff, S.5
  • 53
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone modifications
    • Strahl, B.D., and, Allis, C.D., (2000) The language of covalent histone modifications. Nature, 403 (6765), 41-45.
    • (2000) Nature , vol.403 , Issue.6765 , pp. 41-45
    • Strahl, B.D.1    Allis, C.D.2
  • 54
    • 80051748991 scopus 로고    scopus 로고
    • Prediction and validation of promoters involved in the abscisic acid response in Physcomitrella patens
    • Timmerhaus, G., Hanke, S.T., Buchta, K., and, Rensing, S.A., (2011) Prediction and validation of promoters involved in the abscisic acid response in Physcomitrella patens. Mol. Plant, 4 (4), 713-729.
    • (2011) Mol. Plant , vol.4 , Issue.4 , pp. 713-729
    • Timmerhaus, G.1    Hanke, S.T.2    Buchta, K.3    Rensing, S.A.4
  • 55
    • 79956064734 scopus 로고    scopus 로고
    • Chromatin: Constructing the big picture
    • Van Steensel, B., (2011) Chromatin: constructing the big picture. EMBO J. 30 (10), 1885-1895.
    • (2011) EMBO J. , vol.30 , Issue.10 , pp. 1885-1895
    • Van Steensel, B.1
  • 56
    • 84861982240 scopus 로고    scopus 로고
    • Bivalent histone modifications in early embryogenesis
    • Vastenhouw, N.L., and, Schier, A.F., (2012) Bivalent histone modifications in early embryogenesis. Curr. Opin. Cell Biol. 24 (3), 374-386.
    • (2012) Curr. Opin. Cell Biol. , vol.24 , Issue.3 , pp. 374-386
    • Vastenhouw, N.L.1    Schier, A.F.2
  • 57
    • 66149176899 scopus 로고    scopus 로고
    • Genome-Wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize
    • Wang, X., Elling, A.A., Li, X., et al. (2009) Genome-Wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize. Plant Cell, 21 (4), 1053-1069.
    • (2009) Plant Cell , vol.21 , Issue.4 , pp. 1053-1069
    • Wang, X.1    Elling, A.A.2    Li, X.3
  • 58
    • 77954256270 scopus 로고    scopus 로고
    • The molecular and physiological responses of Physcomitrella patens to ultraviolet-B radiation
    • Wolf, L., Rizzini, L., Stracke, R., Ulm, R., and, Rensing, S.A., (2010) The molecular and physiological responses of Physcomitrella patens to ultraviolet-B radiation. Plant Physiol. 153 (3), 1123-1134.
    • (2010) Plant Physiol. , vol.153 , Issue.3 , pp. 1123-1134
    • Wolf, L.1    Rizzini, L.2    Stracke, R.3    Ulm, R.4    Rensing, S.A.5
  • 59
    • 0033080794 scopus 로고    scopus 로고
    • Chromatin disruption and modification
    • Wolffe, A.P., and, Hayes, J.J., (1999) Chromatin disruption and modification. Nucleic Acids Res. 27 (3), 711-720.
    • (1999) Nucleic Acids Res. , vol.27 , Issue.3 , pp. 711-720
    • Wolffe, A.P.1    Hayes, J.J.2
  • 60
    • 53849146020 scopus 로고    scopus 로고
    • Model-based analysis of ChIP-Seq (MACS)
    • Zhang, Y., Liu, T., Meyer, C.A., et al. (2008) Model-based analysis of ChIP-Seq (MACS). Genome Biol. 9 (9), R137.
    • (2008) Genome Biol. , vol.9 , Issue.9
    • Zhang, Y.1    Liu, T.2    Meyer, C.A.3
  • 61
    • 84880334849 scopus 로고    scopus 로고
    • Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions
    • Zimmer, A.D., Lang, D., Buchta, K., Rombauts, S., Nishiyama, T., Hasebe, M., Van de Peer, Y., Rensing, S.A., and, Reski, R., (2013) Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions. BMC Genomics, 14, 498.
    • (2013) BMC Genomics , vol.14 , pp. 498
    • Zimmer, A.D.1    Lang, D.2    Buchta, K.3    Rombauts, S.4    Nishiyama, T.5    Hasebe, M.6    Van De Peer, Y.7    Rensing, S.A.8    Reski, R.9
  • 62
    • 84871422673 scopus 로고    scopus 로고
    • Genome-wide profiling of histone H3K4-tri-methylation and gene expression in rice under drought stress
    • Zong, W., Zhong, X., You, J., and, Xiong, L., (2013) Genome-wide profiling of histone H3K4-tri-methylation and gene expression in rice under drought stress. Plant Mol. Biol. 81 (1-2), 175-188.
    • (2013) Plant Mol. Biol. , vol.81 , Issue.12 , pp. 175-188
    • Zong, W.1    Zhong, X.2    You, J.3    Xiong, L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.