-
1
-
-
0037327487
-
Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis
-
Abe, M., Katsumata, H., Komeda, Y. and Takahashi, T. (2003). Regulation of shoot epidermal cell differentiation by a pair of homeodomain proteins in Arabidopsis. Development 130, 635-643.
-
(2003)
Development
, vol.130
, pp. 635-643
-
-
Abe, M.1
Katsumata, H.2
Komeda, Y.3
Takahashi, T.4
-
2
-
-
78649503624
-
Identification of novel markers for stem-cell niche of Arabidopsis shoot apex
-
Aggarwal, P., Yadav, R. K. and Reddy, G. V.(2010). Identification of novel markers for stem-cell niche of Arabidopsis shoot apex. Gene Expr. Patterns 10, 259-264.
-
(2010)
Gene Expr. Patterns
, vol.10
, pp. 259-264
-
-
Aggarwal, P.1
Yadav, R.K.2
Reddy, G.V.3
-
3
-
-
4544227964
-
Diversification of genes encoding mei2-like RNA binding proteins in plants
-
Anderson, G. H., Alvarez, N. D. G., Gilman, C., Jeffares, D. C., Trainor, V. C. W., Hanson, M. R. and Veit, B. (2004). Diversification of genes encoding mei2-like RNA binding proteins in plants. Plant Mol. Biol. 54, 653-670.
-
(2004)
Plant Mol. Biol
, vol.54
, pp. 653-670
-
-
Anderson, G.H.1
Alvarez, N.D.G.2
Gilman, C.3
Jeffares, D.C.4
Trainor, V.C.W.5
Hanson, M.R.6
Veit, B.7
-
4
-
-
0029562071
-
The expression of the Athb-8 homeobox gene is restricted to provascular cells in Arabidopsis thaliana
-
Baima, S., Nobili, F., Sessa, G., Lucchetti, S., Ruberti, I. and Morelli, G. (1995). The expression of the Athb-8 homeobox gene is restricted to provascular cells in Arabidopsis thaliana. Development 121, 4171-4182.
-
(1995)
Development
, vol.121
, pp. 4171-4182
-
-
Baima, S.1
Nobili, F.2
Sessa, G.3
Lucchetti, S.4
Ruberti, I.5
Morelli, G.6
-
5
-
-
77951236262
-
Twenty years on: The inner workings of the shoot apical meristem, a developmental dynamo
-
Barton, M. K. (2010). Twenty years on: the inner workings of the shoot apical meristem, a developmental dynamo. Dev. Biol. 341, 95-113.
-
(2010)
Dev. Biol
, vol.341
, pp. 95-113
-
-
Barton, M.K.1
-
6
-
-
0141533218
-
Apical meristems: The plant's fountain of youth
-
Baurle, I. and Laux, T. (2003). Apical meristems: the plant's fountain of youth. Bioessays 25, 961-970.
-
(2003)
Bioessays
, vol.25
, pp. 961-970
-
-
Baurle, I.1
Laux, T.2
-
7
-
-
0001677717
-
Controlling the false discovery rate - a practical and powerful approach to multiple testing
-
Benjamini, Y. and Hochberg, Y. (1995). Controlling the false discovery rate - a practical and powerful approach to multiple testing. J. R. Stat. Soc. Ser. B 57, 289-300.
-
(1995)
J. R. Stat. Soc. Ser. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
8
-
-
0347447343
-
A gene expression map of the Arabidopsis root
-
Birnbaum, K., Shasha, D. E., Wang, J. Y., Jung, J. W., Lambert, G. M., Galbraith, D. W. and Benfey, P. N. (2003). A gene expression map of the Arabidopsis root. Science 302, 1956-1960.
-
(2003)
Science
, vol.302
, pp. 1956-1960
-
-
Birnbaum, K.1
Shasha, D.E.2
Wang, J.Y.3
Jung, J.W.4
Lambert, G.M.5
Galbraith, D.W.6
Benfey, P.N.7
-
9
-
-
70349251262
-
The maize transcription factor KNOTTED1 directly regulates the gibberellin catabolism gene ga2ox1
-
Bolduc, N. and Hake, S. (2009). The maize transcription factor KNOTTED1 directly regulates the gibberellin catabolism gene ga2ox1. Plant Cell 21, 1647-1658.
-
(2009)
Plant Cell
, vol.21
, pp. 1647-1658
-
-
Bolduc, N.1
Hake, S.2
-
10
-
-
33645274977
-
-
New York: Springer
-
Bolstad, B. M., Collin, F., Brettschneider, J., Simpson, K., Cope, L., Irizarry, R. A. and Speed, T. P. (2005). Quality Assessment of Affymetrix GeneChip Data in Bioinformatics and Computational Biology Solutions Using R and Bioconductor. New York: Springer.
-
(2005)
Quality Assessment of Affymetrix GeneChip Data In Bioinformatics and Computational Biology Solutions Using R and Bioconductor
-
-
Bolstad, B.M.1
Collin, F.2
Brettschneider, J.3
Simpson, K.4
Cope, L.5
Irizarry, R.A.6
Speed, T.P.7
-
11
-
-
38149109010
-
A high-resolution root spatiotemporal map reveals dominant expression patterns
-
Brady, S. M., Orlando, D. A., Lee, J.-Y., Wang, J. Y., Koch, J., Dinneny, J. R., Mace, D., Ohler, U. and Benfey, P. N. (2007). A high-resolution root spatiotemporal map reveals dominant expression patterns. Science 318, 801-806.
-
(2007)
Science
, vol.318
, pp. 801-806
-
-
Brady, S.M.1
Orlando, D.A.2
Lee, J.-Y.3
Wang, J.Y.4
Koch, J.5
Dinneny, J.R.6
Mace, D.7
Ohler, U.8
Benfey, P.N.9
-
12
-
-
77955933529
-
Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair
-
Cappadocia, L., Marechal, A., Parent, J.-S., Lepage, E., Sygusch, J. and Brisson, N. (2010). Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair. Plant Cell 22, 1849-1867.
-
(2010)
Plant Cell
, vol.22
, pp. 1849-1867
-
-
Cappadocia, L.1
Marechal, A.2
Parent, J.-S.3
Lepage, E.4
Sygusch, J.5
Brisson, N.6
-
13
-
-
84860141670
-
Gain and loss of photosynthetic membranes during plastid differentiation in the shoot apex of Arabidopsis
-
Charuvi, D., Kiss, V., Nevo, R., Shimoni, E., Adam, Z. and Reich, Z. (2012). Gain and loss of photosynthetic membranes during plastid differentiation in the shoot apex of Arabidopsis. Plant Cell 24, 1143-1157.
-
(2012)
Plant Cell
, vol.24
, pp. 1143-1157
-
-
Charuvi, D.1
Kiss, V.2
Nevo, R.3
Shimoni, E.4
Adam, Z.5
Reich, Z.6
-
14
-
-
1642408616
-
Gibberellin regulates Arabidopsis floral development via suppression of DELLA protein function
-
Cheng, H., Qin, L., Lee, S., Fu, X., Richards, D. E., Cao, D., Luo, D., Harberd, N.P. and Peng, J. (2004). Gibberellin regulates Arabidopsis floral development via suppression of DELLA protein function. Development 131, 1055-1064.
-
(2004)
Development
, vol.131
, pp. 1055-1064
-
-
Cheng, H.1
Qin, L.2
Lee, S.3
Fu, X.4
Richards, D.E.5
Cao, D.6
Luo, D.7
Harberd, N.P.8
Peng, J.9
-
15
-
-
0032447801
-
Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
-
Clough, S. J. and Bent, A. F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735-743.
-
(1998)
Plant J
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
16
-
-
33745243363
-
Conserved requirement for a plant host cell protein in powdery mildew pathogenesis
-
Consonni, C., Humphry, M.E., Hartmann, H.A., Livaja, M., Durner, J., Westphal, L., Vogel, J., Lipka, V., Kemmerling, B., Schulze-Lefert, P. et al. (2006). Conserved requirement for a plant host cell protein in powdery mildew pathogenesis. Nat. Genet. 38, 716-720.
-
(2006)
Nat. Genet
, vol.38
, pp. 716-720
-
-
Consonni, C.1
Humphry, M.E.2
Hartmann, H.A.3
Livaja, M.4
Durner, J.5
Westphal, L.6
Vogel, J.7
Lipka, V.8
Kemmerling, B.9
Schulze-Lefert, P.10
-
17
-
-
33745603179
-
Metabolic aspects of organogenesis in the shoot apical meristem
-
Fleming, A. (2006). Metabolic aspects of organogenesis in the shoot apical meristem. J. Exp. Bot. 57, 1863-1870.
-
(2006)
J. Exp. Bot
, vol.57
, pp. 1863-1870
-
-
Fleming, A.1
-
18
-
-
1042279117
-
In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: New proteins, new functions, and a plastid proteome database
-
Friso, G., Giacomelli, L., Ytterberg, A. J., Peltier, J.-B., Rudella, A., Sun, Q. and van Wijk, K. J. (2004). In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Plant Cell 16, 478-499.
-
(2004)
Plant Cell
, vol.16
, pp. 478-499
-
-
Friso, G.1
Giacomelli, L.2
Ytterberg, A.J.3
Peltier, J.-B.4
Rudella, A.5
Sun, Q.6
van Wijk, K.J.7
-
19
-
-
79952146183
-
Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo
-
Fujii, H., Verslues, P.E. and Zhu, J.-K. (2011). Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Proc. Natl. Acad. Sci. U.S.A. 108, 1717-1722.
-
(2011)
Proc. Natl. Acad. Sci. U.S.A
, vol.108
, pp. 1717-1722
-
-
Fujii, H.1
Verslues, P.E.2
Zhu, J.-K.3
-
20
-
-
1342288026
-
Affy-analysis of Affymetrix GeneChip data at the probe level
-
Gautier, L., Cope, L., Bolstad, B. M. and Irizarry, R. A. (2004). affy-analysis of Affymetrix GeneChip data at the probe level. Bioinformatics 20, 307-315.
-
(2004)
Bioinformatics
, vol.20
, pp. 307-315
-
-
Gautier, L.1
Cope, L.2
Bolstad, B.M.3
Irizarry, R.A.4
-
21
-
-
33645756545
-
-
New York: Springer
-
Gentleman, R., Carey, V., Dudoit, S., Irizarry, R. and Huber, W. (2005). Bioinformatics and Computational Biology Solutions Using R and Bioconductor. New York: Springer.
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
-
-
Gentleman, R.1
Carey, V.2
Dudoit, S.3
Irizarry, R.4
Huber, W.5
-
22
-
-
57749104138
-
Signals derived from YABBY gene activities in organ primordia regulate growth and partitioning of Arabidopsis shoot apical meristems
-
Goldshmidt, A., Alvarez, J. P., Bowman, J. L. and Eshed, Y. (2008). Signals derived from YABBY gene activities in organ primordia regulate growth and partitioning of Arabidopsis shoot apical meristems. Plant Cell 20, 1217-1230.
-
(2008)
Plant Cell
, vol.20
, pp. 1217-1230
-
-
Goldshmidt, A.1
Alvarez, J.P.2
Bowman, J.L.3
Eshed, Y.4
-
23
-
-
70349488727
-
Multiple feedback loops through cytokinin signaling control stem cell number within the Arabidopsis shoot meristem
-
Gordon, S. P., Chickarmane, V. S., Ohno, C. and Meyerowitz, E. M. (2009). Multiple feedback loops through cytokinin signaling control stem cell number within the Arabidopsis shoot meristem. Proc. Natl. Acad. Sci. U.S.A. 106, 16529-16534.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A
, vol.106
, pp. 16529-16534
-
-
Gordon, S.P.1
Chickarmane, V.S.2
Ohno, C.3
Meyerowitz, E.M.4
-
24
-
-
0038077531
-
Molecular analysis of the LATERAL SUPPRESSOR gene in Arabidopsis reveals a conserved control mechanism for axillary meristem formation
-
Greb, T., Clarenz, O., Schafer, E., Muller, D., Herrero, R., Schmitz, G. and Theres, K. (2003). Molecular analysis of the LATERAL SUPPRESSOR gene in Arabidopsis reveals a conserved control mechanism for axillary meristem formation. Genes Dev. 17, 1175-1187.
-
(2003)
Genes Dev
, vol.17
, pp. 1175-1187
-
-
Greb, T.1
Clarenz, O.2
Schafer, E.3
Muller, D.4
Herrero, R.5
Schmitz, G.6
Theres, K.7
-
25
-
-
0032499739
-
Identification of a family of zinc transporter genes from Arabidopsis that respond to zinc deficiency
-
Grotz, N., Fox, T., Connolly, E., Park, W., Guerinot, M. L. and Eide, D. (1998). Identification of a family of zinc transporter genes from Arabidopsis that respond to zinc deficiency. Proc. Natl. Acad. Sci. U.S.A. 95, 7220-7224.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A
, vol.95
, pp. 7220-7224
-
-
Grotz, N.1
Fox, T.2
Connolly, E.3
Park, W.4
Guerinot, M.L.5
Eide, D.6
-
26
-
-
27644549049
-
Patternsof auxin transport and gene expression during primordium development revealed by live imaging of the Arabidopsis inflorescence
-
Heisler, M. G., Ohno, C., Das, P., Sieber, P., Reddy, G. V., Long, J. A. and Meyerowitz, E.M. (2005). Patternsof auxin transport and gene expression during primordium development revealed by live imaging of the Arabidopsis inflorescence. Curr. Biol. 15, 1899-1911.
-
(2005)
Curr. Biol
, vol.15
, pp. 1899-1911
-
-
Heisler, M.G.1
Ohno, C.2
Das, P.3
Sieber, P.4
Reddy, G.V.5
Long, J.A.6
Meyerowitz, E.M.7
-
27
-
-
50649114261
-
Annotating genes of known and unknown function by large-scale coexpression analysis
-
Horan, K., Jang, C., Bailey-Serres, J., Mittler, R., Shelton, C., Harper, J. F., Zhu, J.-K., Cushman, J. C., Gollery, M. and Girke, T. (2008). Annotating genes of known and unknown function by large-scale coexpression analysis. Plant Physiol. 147, 41-57.
-
(2008)
Plant Physiol
, vol.147
, pp. 41-57
-
-
Horan, K.1
Jang, C.2
Bailey-Serres, J.3
Mittler, R.4
Shelton, C.5
Harper, J.F.6
Zhu, J.-K.7
Cushman, J.C.8
Gollery, M.9
Girke, T.10
-
28
-
-
16544383025
-
Arabidopsis RAV1 is down-regulated by brassinosteroid and may act as a negative regulator during plant development
-
Hu, Y. X., Wang, Y. H., Liu, X. F. and Li, J. Y. (2004). Arabidopsis RAV1 is down-regulated by brassinosteroid and may act as a negative regulator during plant development. Cell Res. 14, 8-15.
-
(2004)
Cell Res
, vol.14
, pp. 8-15
-
-
Hu, Y.X.1
Wang, Y.H.2
Liu, X.F.3
Li, J.Y.4
-
29
-
-
78649741789
-
Epidermis: The formation and functions ofa fundamental plant tissue
-
Javelle, M., Vernoud, V., Rogowsky, P. M. and Ingram, G. C. (2011). Epidermis: the formation and functions ofa fundamental plant tissue. New Phytol. 189, 17-39.
-
(2011)
New Phytol
, vol.189
, pp. 17-39
-
-
Javelle, M.1
Vernoud, V.2
Rogowsky, P.M.3
Ingram, G.C.4
-
30
-
-
33749239157
-
-
Biology of The Plant Cuticle, ed. M. Riederer and C. Muller, Oxford, UK: Blackwell Publishing
-
Jeffree, C. E. (2006). The fine structure of the plant cuticle. In Biology of The Plant Cuticle (ed. M. Riederer and C. Muller), pp. 11-110. Oxford, UK: Blackwell Publishing.
-
(2006)
The Fine Structure of the Plant Cuticle
, pp. 11-110
-
-
Jeffree, C.E.1
-
31
-
-
77957799907
-
Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control
-
Jiao, Y. and Meyerowitz, E. M. (2010). Cell-type specific analysis of translating RNAs in developing flowers reveals new levels of control. Mol. Syst. Biol. 6, 419.
-
(2010)
Mol. Syst. Biol
, vol.6
, pp. 419
-
-
Jiao, Y.1
Meyerowitz, E.M.2
-
32
-
-
33845736874
-
The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana
-
Journot-Catalino, N., Somssich, I. E., Roby, D. and Kroj, T. (2006). The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. Plant Cell 18, 3289-3302.
-
(2006)
Plant Cell
, vol.18
, pp. 3289-3302
-
-
Journot-Catalino, N.1
Somssich, I.E.2
Roby, D.3
Kroj, T.4
-
33
-
-
59549093642
-
ArrayQualityMetrics-a bioconductor package for quality assessment of microarray data
-
Kauffmann, A., Gentleman, R. and Huber, W. (2009). arrayQualityMetrics-a bioconductor package for quality assessment of microarray data. Bioinformatics 25, 415-416.
-
(2009)
Bioinformatics
, vol.25
, pp. 415-416
-
-
Kauffmann, A.1
Gentleman, R.2
Huber, W.3
-
34
-
-
0035822054
-
KANADI regulates organ polarity in Arabidopsis
-
Kerstetter, R. A., Bollman, K., Taylor, R. A., Bomblies, K. and Poethig, R. S. (2001). KANADI regulates organ polarity in Arabidopsis. Nature 411, 706-709.
-
(2001)
Nature
, vol.411
, pp. 706-709
-
-
Kerstetter, R.A.1
Bollman, K.2
Taylor, R.A.3
Bomblies, K.4
Poethig, R.S.5
-
35
-
-
84873097261
-
A protodermal miR394 signal defines a region of stem cell competence in the Arabidopsis shoot meristem
-
Knauer, S., Holt, A. L., Rubio-Somoza, I., Tucker, E. J., Hinze, A., Pisch, M., Javelle, M., Timmermans, M. C., Tucker, M. R. and Laux, T. (2013). A protodermal miR394 signal defines a region of stem cell competence in the Arabidopsis shoot meristem. Dev. Cell 24, 125-132.
-
(2013)
Dev. Cell
, vol.24
, pp. 125-132
-
-
Knauer, S.1
Holt, A.L.2
Rubio-Somoza, I.3
Tucker, E.J.4
Hinze, A.5
Pisch, M.6
Javelle, M.7
Timmermans, M.C.8
Tucker, M.R.9
Laux, T.10
-
36
-
-
33846902325
-
Direct control of shoot meristem activity by a cytokinin-activating enzyme
-
Kurakawa, T., Ueda, N., Maekawa, M., Kobayashi, K., Kojima, M., Nagato, Y., Sakakibara, H. and Kyozuka, J. (2007). Direct control of shoot meristem activity by a cytokinin-activating enzyme. Nature 445, 652-655.
-
(2007)
Nature
, vol.445
, pp. 652-655
-
-
Kurakawa, T.1
Ueda, N.2
Maekawa, M.3
Kobayashi, K.4
Kojima, M.5
Nagato, Y.6
Sakakibara, H.7
Kyozuka, J.8
-
37
-
-
72049099598
-
Functional analyses of LONELY GUY cytokinin-activating enzymes reveal the importance of the direct activation pathway in Arabidopsis
-
Kuroha, T., Tokunaga, H., Kojima, M., Ueda, N., Ishida, T., Nagawa, S., Fukuda, H., Sugimoto, K. and Sakakibara, H. (2009). Functional analyses of LONELY GUY cytokinin-activating enzymes reveal the importance of the direct activation pathway in Arabidopsis. Plant Cell 21, 3152-3169.
-
(2009)
Plant Cell
, vol.21
, pp. 3152-3169
-
-
Kuroha, T.1
Tokunaga, H.2
Kojima, M.3
Ueda, N.4
Ishida, T.5
Nagawa, S.6
Fukuda, H.7
Sugimoto, K.8
Sakakibara, H.9
-
38
-
-
0035542743
-
A novel plant kinesin-related protein specifically associates with the phragmoplast organelles
-
Lee, Y.-R. J., Giang, H. M. and Liu, B. (2001). A novel plant kinesin-related protein specifically associates with the phragmoplast organelles. Plant Cell 13, 2427-2439.
-
(2001)
Plant Cell
, vol.13
, pp. 2427-2439
-
-
Lee, Y.-R.J.1
Giang, H.M.2
Liu, B.3
-
39
-
-
33645822943
-
Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots
-
Lee, J.-Y., Colinas, J., Wang, J. Y., Mace, D., Ohler, U. and Benfey, P. N. (2006). Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. Proc. Natl. Acad. Sci. U.S.A. 103, 6055-6060.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A
, vol.103
, pp. 6055-6060
-
-
Lee, J.-Y.1
Colinas, J.2
Wang, J.Y.3
Mace, D.4
Ohler, U.5
Benfey, P.N.6
-
40
-
-
57749097114
-
Mutation of the Arabidopsis NRT1.5 nitrate transporter causes defective root-to-shoot nitrate transport
-
Lin, S.-H., Kuo, H.-F., Canivenc, G., Lin, C.-S., Lepetit, M., Hsu, P.-K., Tillard, P., Lin, H.-L., Wang, Y.-Y., Tsai, C.-B. et al. (2008). Mutation of the Arabidopsis NRT1.5 nitrate transporter causes defective root-to-shoot nitrate transport. Plant Cell 20, 2514-2528.
-
(2008)
Plant Cell
, vol.20
, pp. 2514-2528
-
-
Lin, S.-H.1
Kuo, H.-F.2
Canivenc, G.3
Lin, C.-S.4
Lepetit, M.5
Hsu, P.-K.6
Tillard, P.7
Lin, H.-L.8
Wang, Y.-Y.9
Tsai, C.-B.10
-
41
-
-
77950367153
-
SLOW MOTION is required for within-plant auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem in Arabidopsis
-
Lohmann, D., Stacey, N., Breuninger, H., Jikumaru, Y., Muller, D., Sicard, A., Leyser, O., Yamaguchi, S. and Lenhard, M. (2010). SLOW MOTION is required for within-plant auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem in Arabidopsis. Plant Cell 22, 335-348.
-
(2010)
Plant Cell
, vol.22
, pp. 335-348
-
-
Lohmann, D.1
Stacey, N.2
Breuninger, H.3
Jikumaru, Y.4
Muller, D.5
Sicard, A.6
Leyser, O.7
Yamaguchi, S.8
Lenhard, M.9
-
42
-
-
0030329947
-
Identification of a meristem L1 layer-specific gene in Arabidopsis that is expressed during embryonic pattern formation and defines a new class of homeobox genes
-
Lu, P., Porat, R., Nadeau, J. A. and O'Neill, S. D. (1996). Identification of a meristem L1 layer-specific gene in Arabidopsis that is expressed during embryonic pattern formation and defines a new class of homeobox genes. Plant Cell 8, 2155-2168.
-
(1996)
Plant Cell
, vol.8
, pp. 2155-2168
-
-
Lu, P.1
Porat, R.2
Nadeau, J.A.3
O'Neill, S.D.4
-
44
-
-
24044440971
-
BiNGO: A Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
-
Maere, S., Heymans, K. and Kuiper, M. (2005). BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics 21, 3448-3449.
-
(2005)
Bioinformatics
, vol.21
, pp. 3448-3449
-
-
Maere, S.1
Heymans, K.2
Kuiper, M.3
-
45
-
-
0032444227
-
Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem
-
Mayer, K. F. X., Schoof, H., Haecker, A., Lenhard, M., Jurgens, G. and Laux, T. (1998). Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell 95, 805-815.
-
(1998)
Cell
, vol.95
, pp. 805-815
-
-
Mayer, K.F.X.1
Schoof, H.2
Haecker, A.3
Lenhard, M.4
Jurgens, G.5
Laux, T.6
-
46
-
-
33645143721
-
Effects of filtering by Present call on analysis of microarray experiments
-
McClintick, J. N. and Edenberg, H. J. (2006). Effects of filtering by Present call on analysis of microarray experiments. BMC Bioinformatics 7, 49.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 49
-
-
McClintick, J.N.1
Edenberg, H.J.2
-
47
-
-
33746777825
-
Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses
-
Nemhauser, J. L., Hon, F. and Chory, J. (2006). Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell 126, 467-475.
-
(2006)
Cell
, vol.126
, pp. 467-475
-
-
Nemhauser, J.L.1
Hon, F.2
Chory, J.3
-
48
-
-
84866682732
-
Developmental silencing of the AtTERT gene is associated with increased H3K27me3 loading and maintenance of its euchromatic environment
-
Ogrocka, A., Sykorova, E., Fajkus, J. and Fojtova, M. (2012). Developmental silencing of the AtTERT gene is associated with increased H3K27me3 loading and maintenance of its euchromatic environment. J. Exp. Bot. 63, 4233-4241.
-
(2012)
J. Exp. Bot
, vol.63
, pp. 4233-4241
-
-
Ogrocka, A.1
Sykorova, E.2
Fajkus, J.3
Fojtova, M.4
-
49
-
-
84856211121
-
Stem cell maintenance in shoot apical meristems
-
Perales, M. and Reddy, G. V. (2012). Stem cell maintenance in shoot apical meristems. Curr. Opin. Plant Biol. 15, 10-16.
-
(2012)
Curr. Opin. Plant Biol
, vol.15
, pp. 10-16
-
-
Perales, M.1
Reddy, G.V.2
-
50
-
-
10944251699
-
Desulfoglucosinolate sulfotransferases from Arabidopsis thaliana catalyze the final step in the biosynthesis of the glucosinolate core structure
-
Piotrowski, M., Schemenewitz, A., Lopukhina, A., Muller, A., Janowitz, T., Weiler, E. W. and Oecking, C. (2004). Desulfoglucosinolate sulfotransferases from Arabidopsis thaliana catalyze the final step in the biosynthesis of the glucosinolate core structure. J. Biol. Chem. 279, 50717-50725.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 50717-50725
-
-
Piotrowski, M.1
Schemenewitz, A.2
Lopukhina, A.3
Muller, A.4
Janowitz, T.5
Weiler, E.W.6
Oecking, C.7
-
52
-
-
38749135515
-
Live-imaging stem-cell homeostasis in the Arabidopsis shoot apex
-
Reddy, G. V. (2008). Live-imaging stem-cell homeostasis in the Arabidopsis shoot apex. Curr. Opin. Plant Biol. 11, 88-93.
-
(2008)
Curr. Opin. Plant Biol
, vol.11
, pp. 88-93
-
-
Reddy, G.V.1
-
53
-
-
27344438574
-
Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex
-
Reddy, G. V. and Meyerowitz, E. M. (2005). Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex. Science 310, 663-667.
-
(2005)
Science
, vol.310
, pp. 663-667
-
-
Reddy, G.V.1
Meyerowitz, E.M.2
-
54
-
-
4644229971
-
Realtime lineage analysis reveals oriented cell divisions associated with morphogenesis at the shoot apex of Arabidopsis thaliana
-
Reddy, G. V., Heisler, M. G., Ehrhardt, D. W. and Meyerowitz, E. M. (2004). Realtime lineage analysis reveals oriented cell divisions associated with morphogenesis at the shoot apex of Arabidopsis thaliana. Development 131, 4225-4237.
-
(2004)
Development
, vol.131
, pp. 4225-4237
-
-
Reddy, G.V.1
Heisler, M.G.2
Ehrhardt, D.W.3
Meyerowitz, E.M.4
-
55
-
-
0041827157
-
Microsurgical and laser ablation analysis of interactions between the zones and layers of the tomato shoot apical meristem
-
Reinhardt, D., Frenz, M., Mandel, T. and Kuhlemeier, C. (2003a). Microsurgical and laser ablation analysis of interactions between the zones and layers of the tomato shoot apical meristem. Development 130, 4073-4083.
-
(2003)
Development
, vol.130
, pp. 4073-4083
-
-
Reinhardt, D.1
Frenz, M.2
Mandel, T.3
Kuhlemeier, C.4
-
56
-
-
0344875033
-
Regulation of phyllotaxisby polar auxin transport
-
Reinhardt, D., Pesce, E.-R., Stieger, P., Mandel, T., Baltensperge, K., Bennett, M., Traas, J., Friml, J. and Kuhlemeier, C. (2003b). Regulation of phyllotaxisby polar auxin transport. Nature 426, 255-260.
-
(2003)
Nature
, vol.426
, pp. 255-260
-
-
Reinhardt, D.1
Pesce, E.-R.2
Stieger, P.3
Mandel, T.4
Baltensperge, K.5
Bennett, M.6
Traas, J.7
Friml, J.8
Kuhlemeier, C.9
-
57
-
-
13444256462
-
Microsurgical and laser ablation analysis of leaf positioning and dorsoventral patterning in tomato
-
Reinhardt, D., Frenz, M., Mandel, T. and Kuhlemeier, C. (2005). Microsurgical and laser ablation analysis of leaf positioning and dorsoventral patterning in tomato. Development 132, 15-26.
-
(2005)
Development
, vol.132
, pp. 15-26
-
-
Reinhardt, D.1
Frenz, M.2
Mandel, T.3
Kuhlemeier, C.4
-
58
-
-
0001655925
-
Polarity and induction of organized vascular tissues
-
Sachs, T. (1969). Polarity and induction of organized vascular tissues. Ann. Bot. (Lond.) 33, 263.
-
(1969)
Ann. Bot. (Lond.)
, vol.33
, pp. 263
-
-
Sachs, T.1
-
59
-
-
77956866109
-
The control of the patterned differentiation of vascular tissues
-
Sachs, T. (1981). The control of the patterned differentiation of vascular tissues. Adv. Bot. Res. 9, 151-262.
-
(1981)
Adv. Bot. Res
, vol.9
, pp. 151-262
-
-
Sachs, T.1
-
60
-
-
0035281996
-
KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem
-
Sakamoto, T., Kamiya, N., Ueguchi-Tanaka, M., Iwahori, S. and Matsuoka, M. (2001). KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem. Genes Dev. 15, 581-590.
-
(2001)
Genes Dev
, vol.15
, pp. 581-590
-
-
Sakamoto, T.1
Kamiya, N.2
Ueguchi-Tanaka, M.3
Iwahori, S.4
Matsuoka, M.5
-
61
-
-
0001360986
-
Periclinal chimeras in datura stramonium in relation to development of leaf and flower
-
Satina, S. and Blackeslee, A. F. (1941). Periclinal chimeras in datura stramonium in relation to development of leaf and flower. Am. J. Bot. 28, 862-871.
-
(1941)
Am. J. Bot
, vol.28
, pp. 862-871
-
-
Satina, S.1
Blackeslee, A.F.2
-
62
-
-
0001141569
-
Demonstration of the three germ layers in the shoot apex of Datura by means of induced polyploidy in periclinal chimeras
-
Satina, S., Blakeslee, A. F. and Avery, A. G. (1940). Demonstration of the three germ layers in the shoot apex of Datura by means of induced polyploidy in periclinal chimeras. Am. J. Bot. 27, 895-905.
-
(1940)
Am. J. Bot
, vol.27
, pp. 895-905
-
-
Satina, S.1
Blakeslee, A.F.2
Avery, A.G.3
-
63
-
-
33947166907
-
The epidermis both drives and restricts plant shoot growth
-
Savaldi-Goldstein, S., Peto, C. and Chory, J. (2007). The epidermis both drives and restricts plant shoot growth. Nature 446, 199-202.
-
(2007)
Nature
, vol.446
, pp. 199-202
-
-
Savaldi-Goldstein, S.1
Peto, C.2
Chory, J.3
-
65
-
-
33748174652
-
The role of hormones in shoot apical meristem function
-
Shani, E., Yanai, O. and Ori, N. (2006). The role of hormones in shoot apical meristem function. Curr. Opin. Plant Biol. 9, 484-489.
-
(2006)
Curr. Opin. Plant Biol
, vol.9
, pp. 484-489
-
-
Shani, E.1
Yanai, O.2
Ori, N.3
-
66
-
-
33750797968
-
Genome scan for cis-regulatory DNA motifs associated with social behavior in honey bees
-
Sinha, S., Ling, X., Whitfield, C. W., Zhai, C. and Robinson, G.E.(2006). Genome scan for cis-regulatory DNA motifs associated with social behavior in honey bees. Proc. Natl. Acad. Sci. U.S.A. 103, 16352-16357.
-
(2006)
Proc. Natl. Acad. Sci. U.S.A
, vol.103
, pp. 16352-16357
-
-
Sinha, S.1
Ling, X.2
Whitfield, C.W.3
Zhai, C.4
Robinson, G.E.5
-
67
-
-
79551587720
-
Cytoscape 2.8: New features for data integration and network visualization
-
Smoot, M. E., Ono, K., Ruscheinski, J., Wang, P.-L. and Ideker, T. (2011). Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27, 431-432.
-
(2011)
Bioinformatics
, vol.27
, pp. 431-432
-
-
Smoot, M.E.1
Ono, K.2
Ruscheinski, J.3
Wang, P.-L.4
Ideker, T.5
-
68
-
-
4544341015
-
Linear models and empirical bayes methods for assessing differential expression in microarray experiments
-
Smyth, G. K. (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3, 1544-6115.
-
(2004)
Stat. Appl. Genet. Mol. Biol
, vol.3
, pp. 1544-6115
-
-
Smyth, G.K.1
-
69
-
-
22044451183
-
Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid
-
Staswick, P. E., Serban, B., Rowe, M., Tiryaki, I., Maldonado, M. T., Maldonado, M. C. and Suza, W. (2005). Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid. Plant Cell 17, 616-627.
-
(2005)
Plant Cell
, vol.17
, pp. 616-627
-
-
Staswick, P.E.1
Serban, B.2
Rowe, M.3
Tiryaki, I.4
Maldonado, M.T.5
Maldonado, M.C.6
Suza, W.7
-
71
-
-
84872614860
-
Comprehensive analysisofsilencing mutants reveals complex regulation of the Arabidopsis methylome
-
Stroud, H., Greenberg, M. V. C., Feng, S., Bernatavichute, Y. V. and Jacobsen, S. E. (2013). Comprehensive analysisofsilencing mutants reveals complex regulation of the Arabidopsis methylome. Cell 152, 352-364.
-
(2013)
Cell
, vol.152
, pp. 352-364
-
-
Stroud, H.1
Greenberg, M.V.C.2
Feng, S.3
Bernatavichute, Y.V.4
Jacobsen, S.E.5
-
72
-
-
84879937784
-
Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant
-
Sudre, D., Gutierrez-Carbonell, E., Lattanzio, G., Rellan-Álvarez, R., Gaymard, F., Wohlgemuth, G., Fiehn, O., Alvarez-Fernandez, A., Zamarreno, A. M., Bacaicoa, E. et al. (2013). Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant. J. Exp. Bot. 64, 2665-2688.
-
(2013)
J. Exp. Bot
, vol.64
, pp. 2665-2688
-
-
Sudre, D.1
Gutierrez-Carbonell, E.2
Lattanzio, G.3
Rellan-Álvarez, R.4
Gaymard, F.5
Wohlgemuth, G.6
Fiehn, O.7
Alvarez-Fernandez, A.8
Zamarreno, A.M.9
Bacaicoa, E.10
-
74
-
-
72449167897
-
A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana
-
Tsuchisaka, A., Yu, G., Jin, H., Alonso, J.M., Ecker, J. R., Zhang, X., Gao, S. and Theologis, A.(2009). A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana. Genetics 183, 979-1003.
-
(2009)
Genetics
, vol.183
, pp. 979-1003
-
-
Tsuchisaka, A.1
Yu, G.2
Jin, H.3
Alonso, J.M.4
Ecker, J.R.5
Zhang, X.6
Gao, S.7
Theologis, A.8
-
75
-
-
79960090553
-
The auxin signaling network translates dynamic input into robust patterning at the shoot apex
-
Vernoux, T., Brunoud, G., Farcot, E., Morin, V., Van den Daele, H., Legrand, J., Oliva, M., Das, P., Larrieu, A., Wells, D. et al. (2011). The auxin signaling network translates dynamic input into robust patterning at the shoot apex. Mol. Syst. Biol. 7, 508.
-
(2011)
Mol. Syst. Biol
, vol.7
, pp. 508
-
-
Vernoux, T.1
Brunoud, G.2
Farcot, E.3
Morin, V.4
Van den Daele, H.5
Legrand, J.6
Oliva, M.7
Das, P.8
Larrieu, A.9
Wells, D.10
-
76
-
-
70449656963
-
Towards a functional understanding of cell growth dynamics in shoot meristem stem-cell niche
-
Xie, M., Tataw, M. and Reddy, G. V. (2009). Towards a functional understanding of cell growth dynamics in shoot meristem stem-cell niche. Semin. Cell Dev. Biol. 20, 1126-1133.
-
(2009)
Semin. Cell Dev. Biol
, vol.20
, pp. 1126-1133
-
-
Xie, M.1
Tataw, M.2
Reddy, G.V.3
-
77
-
-
63849261018
-
Gene expression map of the Arabidopsis shoot apical meristem stem cell niche
-
Yadav, R. K., Girke, T., Pasala, S., Xi, M. and Reddy, G. V. (2009). Gene expression map of the Arabidopsis shoot apical meristem stem cell niche. Proc. Natl. Acad. Sci. U.S.A. 106, 4941-4946.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A
, vol.106
, pp. 4941-4946
-
-
Yadav, R.K.1
Girke, T.2
Pasala, S.3
Xi, M.4
Reddy, G.V.5
-
78
-
-
80053629973
-
WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex
-
Yadav, R. K., Perales, M., Gruel, J., Girke, T., Jonsson, H. and Reddy, G. V. (2011). WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex. Genes Dev. 25, 2025-2030.
-
(2011)
Genes Dev
, vol.25
, pp. 2025-2030
-
-
Yadav, R.K.1
Perales, M.2
Gruel, J.3
Girke, T.4
Jonsson, H.5
Reddy, G.V.6
-
79
-
-
84876520570
-
Plant stem cell maintenance involves direct transcriptional repression of differentiation program
-
Yadav, R. K., Perales, M., Gruel, J., Ohno, C., Heisler, H., Girke, T., Jonsson, H. and Reddy, G. V. (2013). Plant stem cell maintenance involves direct transcriptional repression of differentiation program. Mol. Sys. Biol. 9, 654.
-
(2013)
Mol. Sys. Biol
, vol.9
, pp. 654
-
-
Yadav, R.K.1
Perales, M.2
Gruel, J.3
Ohno, C.4
Heisler, H.5
Girke, T.6
Jonsson, H.7
Reddy, G.V.8
-
80
-
-
78651339097
-
AGRIS: The Arabidopsis Gene Regulatory Information Server, an update
-
Yilmaz, A., Mejia-Guerra, M. K., Kurz, K., Liang, X., Welch, L. and Grotewold, E. (2011). AGRIS: the Arabidopsis Gene Regulatory Information Server, an update. Nucleic Acids Res. 39, D1118-D1122.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Yilmaz, A.1
Mejia-Guerra, M.K.2
Kurz, K.3
Liang, X.4
Welch, L.5
Grotewold, E.6
-
81
-
-
79959961285
-
Stem cell activation by light guides plant organogenesis
-
Yoshida, S., Mandel, T. and Kuhlemeier, C. (2011). Stem cell activation by light guides plant organogenesis. Genes Dev. 25, 1439-1450.
-
(2011)
Genes Dev
, vol.25
, pp. 1439-1450
-
-
Yoshida, S.1
Mandel, T.2
Kuhlemeier, C.3
-
82
-
-
77952525724
-
Auxin biosynthesis and its role in plant development
-
Zhao, Y. (2010). Auxin biosynthesis and its role in plant development. Annu. Rev. Plant Biol. 61, 49-64.
-
(2010)
Annu. Rev. Plant Biol
, vol.61
, pp. 49-64
-
-
Zhao, Y.1
-
83
-
-
37849021893
-
SAD2, an importin -like protein, isrequired for UV-B response in Arabidopsis by mediating MYB4 nuclear trafficking
-
Zhao, J., Zhang, W., Zhao, Y., Gong, X., Guo, L., Zhu, G., Wang, X., Gong, Z., Schumaker, K. S., Guo, Y.(2007). SAD2, an importin -like protein, isrequired for UV-B response in Arabidopsis by mediating MYB4 nuclear trafficking. Plant Cell 19, 3805-3818.
-
(2007)
Plant Cell
, vol.19
, pp. 3805-3818
-
-
Zhao, J.1
Zhang, W.2
Zhao, Y.3
Gong, X.4
Guo, L.5
Zhu, G.6
Wang, X.7
Gong, Z.8
Schumaker, K.S.9
Guo, Y.10
-
84
-
-
0036926549
-
A kinesin-like protein is essential for oriented deposition of cellulose microfibrils and cell wall strength
-
Zhong, R., Burk, D. H., Morrison, W. H., and Ye, Z.-H. (2002). A kinesin-like protein is essential for oriented deposition of cellulose microfibrils and cell wall strength. Plant Cell 14, 3101-3117.
-
(2002)
Plant Cell
, vol.14
, pp. 3101-3117
-
-
Zhong, R.1
Burk, D.H.2
Morrison, W.H.3
Ye, Z.-H.4
|