-
1
-
-
4644229971
-
Real-time lineage analysis reveals oriented cell divisions associated with morphogenesis at the shoot apex of Arabidopsis thaliana
-
Reddy G.V., Heisler M.G., Ehrhardt D.W., and Meyerowitz E.M. Real-time lineage analysis reveals oriented cell divisions associated with morphogenesis at the shoot apex of Arabidopsis thaliana. Development 131 (2004) 4225-4237
-
(2004)
Development
, vol.131
, pp. 4225-4237
-
-
Reddy, G.V.1
Heisler, M.G.2
Ehrhardt, D.W.3
Meyerowitz, E.M.4
-
2
-
-
0842334769
-
In vivo analysis of cell division, cell growth, and differentiation at the shoot apical meristem in Arabidopsis
-
Grandjean O., Vernoux T., Laufs P., Belcram K., Mizukami Y., and Traas J. In vivo analysis of cell division, cell growth, and differentiation at the shoot apical meristem in Arabidopsis. Plant Cell 16 (2003) 74-87
-
(2003)
Plant Cell
, vol.16
, pp. 74-87
-
-
Grandjean, O.1
Vernoux, T.2
Laufs, P.3
Belcram, K.4
Mizukami, Y.5
Traas, J.6
-
3
-
-
27644549049
-
Auxin transport dynamics and gene expression patterns during primordium development in the Arabidopsis Inflorescence Meristem
-
This study employs multiple fluorescent reporter constructs to mark different cell types and to follow the temporal dynamics of primordial morphogenesis in the SAMs of Arabidopsis.
-
Heisler M.G., Ohno C., Das P., Sieber P., Reddy G.V., Long J.A., and Meyerowitz E.M. Auxin transport dynamics and gene expression patterns during primordium development in the Arabidopsis Inflorescence Meristem. Curr Biol 15 (2005) 1899-1911. This study employs multiple fluorescent reporter constructs to mark different cell types and to follow the temporal dynamics of primordial morphogenesis in the SAMs of Arabidopsis.
-
(2005)
Curr Biol
, vol.15
, pp. 1899-1911
-
-
Heisler, M.G.1
Ohno, C.2
Das, P.3
Sieber, P.4
Reddy, G.V.5
Long, J.A.6
Meyerowitz, E.M.7
-
4
-
-
0141533218
-
Apical meristems: the plant's fountain of youth
-
Baurle I., and Laux T. Apical meristems: the plant's fountain of youth. Bioessays 25 (2003) 961-970
-
(2003)
Bioessays
, vol.25
, pp. 961-970
-
-
Baurle, I.1
Laux, T.2
-
5
-
-
26844498368
-
Stem cell regulation in the Arabidopsis shoot apical meristem
-
Williams L., and Fletcher J.C. Stem cell regulation in the Arabidopsis shoot apical meristem. Curr Opin Plant Biol 8 (2005) 582-586
-
(2005)
Curr Opin Plant Biol
, vol.8
, pp. 582-586
-
-
Williams, L.1
Fletcher, J.C.2
-
6
-
-
0034906267
-
Signaling through the CLAVATA1 receptor complex
-
DeYoung B.J., and Clark S.E. Signaling through the CLAVATA1 receptor complex. Plant Mol Biol 46 (2001) 505-513
-
(2001)
Plant Mol Biol
, vol.46
, pp. 505-513
-
-
DeYoung, B.J.1
Clark, S.E.2
-
7
-
-
34249290439
-
Unravelling developmental dynamics: transient intervention and live imaging in plants
-
This review provides information about applications and practices of transient manipulation and live-imaging of plant tissues and processes.
-
Reddy G.V., Gordon S.P., and Meyerowitz E.M. Unravelling developmental dynamics: transient intervention and live imaging in plants. Nat Rev Mol Cell Biol 8 (2007) 491-501. This review provides information about applications and practices of transient manipulation and live-imaging of plant tissues and processes.
-
(2007)
Nat Rev Mol Cell Biol
, vol.8
, pp. 491-501
-
-
Reddy, G.V.1
Gordon, S.P.2
Meyerowitz, E.M.3
-
8
-
-
33644622059
-
The uses of green fluorescent protein in plants
-
Haseloff J., and Siemering K.R. The uses of green fluorescent protein in plants. Methods Biochem Anal 47 (2006) 259-284
-
(2006)
Methods Biochem Anal
, vol.47
, pp. 259-284
-
-
Haseloff, J.1
Siemering, K.R.2
-
9
-
-
37248999416
-
Imaging plant cells
-
Pawley J. (Ed), Springer, NY [Chapter 44]. This chapter provides in-depth information about different imaging methods and imaging systems for fluorescent labeling of plant cells.
-
Moreno N., Bougourd S., Haseloff J., and Feijo J.A. Imaging plant cells. In: Pawley J. (Ed). Handbook of Biological Confocal Microscopy. 3rd ed. (2006), Springer, NY 769-787 [Chapter 44]. This chapter provides in-depth information about different imaging methods and imaging systems for fluorescent labeling of plant cells.
-
(2006)
Handbook of Biological Confocal Microscopy. 3rd ed.
, pp. 769-787
-
-
Moreno, N.1
Bougourd, S.2
Haseloff, J.3
Feijo, J.A.4
-
10
-
-
0036016431
-
CLV3 is localized to the extracellular space, where it activates the Arabidopsis CLAVATA stem cell signaling pathway
-
Rojo E., Sharma V.K., Kovaleva V., Raikhel N.V., and Fletcher J.C. CLV3 is localized to the extracellular space, where it activates the Arabidopsis CLAVATA stem cell signaling pathway. Plant Cell 14 (2002) 969-977
-
(2002)
Plant Cell
, vol.14
, pp. 969-977
-
-
Rojo, E.1
Sharma, V.K.2
Kovaleva, V.3
Raikhel, N.V.4
Fletcher, J.C.5
-
11
-
-
0042093777
-
Stem cell homeostasis in the Arabidopsis shoot meristem is regulated by intercellular movement of CLAVATA3 and its sequestration by CLAVATA1
-
Lenhard M., and Laux T. Stem cell homeostasis in the Arabidopsis shoot meristem is regulated by intercellular movement of CLAVATA3 and its sequestration by CLAVATA1. Development 130 (2003) 3163-3173
-
(2003)
Development
, vol.130
, pp. 3163-3173
-
-
Lenhard, M.1
Laux, T.2
-
12
-
-
33846111346
-
CLE peptide ligands and their roles in establishing meristems
-
Fiers M., Ku K.L., and Liu C.M. CLE peptide ligands and their roles in establishing meristems. Curr Opin Plant Biol 10 (2007) 39-43
-
(2007)
Curr Opin Plant Biol
, vol.10
, pp. 39-43
-
-
Fiers, M.1
Ku, K.L.2
Liu, C.M.3
-
13
-
-
33747144246
-
Dodeca-CLE peptides as suppressors of plant stem cell differentiation
-
Ito Y., Nakanomyo I., Motose H., Iwamoto K., Sawa S., Dohmae N., and Fukuda H. Dodeca-CLE peptides as suppressors of plant stem cell differentiation. Science 313 (2006) 842-845
-
(2006)
Science
, vol.313
, pp. 842-845
-
-
Ito, Y.1
Nakanomyo, I.2
Motose, H.3
Iwamoto, K.4
Sawa, S.5
Dohmae, N.6
Fukuda, H.7
-
14
-
-
33747107058
-
A plant peptide encoded by CLV3 identified by in situ MALDI-TOF MS analysis
-
Kondo T., Sawa S., Kinoshita A., Mizuno S., Kakimoto T., Fukuda H., and Sakagami Y. A plant peptide encoded by CLV3 identified by in situ MALDI-TOF MS analysis. Science 313 (2006) 845-848
-
(2006)
Science
, vol.313
, pp. 845-848
-
-
Kondo, T.1
Sawa, S.2
Kinoshita, A.3
Mizuno, S.4
Kakimoto, T.5
Fukuda, H.6
Sakagami, Y.7
-
16
-
-
34247535512
-
CLV3/ESR-related (CLE) peptides as intercellular signaling molecules in plant
-
Sawa S., Kinoshita A., Nakanomyo I., and Fukuda H. CLV3/ESR-related (CLE) peptides as intercellular signaling molecules in plant. Chem Rec 6 (2006) 303-310
-
(2006)
Chem Rec
, vol.6
, pp. 303-310
-
-
Sawa, S.1
Kinoshita, A.2
Nakanomyo, I.3
Fukuda, H.4
-
17
-
-
0032503999
-
Specific covalent labeling of recombinant protein molecules inside live cells
-
Griffin B.A., Adams S.R., and Tsien R.Y. Specific covalent labeling of recombinant protein molecules inside live cells. Science 281 (1998) 269-272
-
(1998)
Science
, vol.281
, pp. 269-272
-
-
Griffin, B.A.1
Adams, S.R.2
Tsien, R.Y.3
-
18
-
-
34047229738
-
FlAsH-based live-cell fluorescent imaging of synthetic peptides expressed in Arabidopsis and tobacco
-
This work describes the use of tetracysteine motif tags as fluorescent probes to label-specific proteins in living plant cells.
-
Estevez J.M., and Somerville C. FlAsH-based live-cell fluorescent imaging of synthetic peptides expressed in Arabidopsis and tobacco. Biotechniques 41 (2006) 569-570. This work describes the use of tetracysteine motif tags as fluorescent probes to label-specific proteins in living plant cells.
-
(2006)
Biotechniques
, vol.41
, pp. 569-570
-
-
Estevez, J.M.1
Somerville, C.2
-
19
-
-
0034677650
-
The stem cell population of Arabidopsis shoot meristems is maintained by a regulatory loop between the CLAVATA and WUSCHEL genes
-
Schoof H., Lenhard M., Haecker A., Mayer K.F.X., Jürgens G., and Laux T. The stem cell population of Arabidopsis shoot meristems is maintained by a regulatory loop between the CLAVATA and WUSCHEL genes. Cell 100 (2000) 635-644
-
(2000)
Cell
, vol.100
, pp. 635-644
-
-
Schoof, H.1
Lenhard, M.2
Haecker, A.3
Mayer, K.F.X.4
Jürgens, G.5
Laux, T.6
-
20
-
-
22144498191
-
CORONA, a member of the class III homeodomain-leucine zipper gene family in Arabidopsis, regulates stem cell specification and organogenesis
-
Green K.A., Prigge M.J., Katzman R.B., and Clark S.E. CORONA, a member of the class III homeodomain-leucine zipper gene family in Arabidopsis, regulates stem cell specification and organogenesis. Plant Cell 17 (2005) 691-704
-
(2005)
Plant Cell
, vol.17
, pp. 691-704
-
-
Green, K.A.1
Prigge, M.J.2
Katzman, R.B.3
Clark, S.E.4
-
21
-
-
26844530418
-
Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem
-
In this study, an image processing method has been employed to quantify GFP intensity from two-dimensional optical sections of RM cells, expressing an endoplasmic-reticulum-localized GFP under the influence of WUS promoter. The GFP intensity was taken as a direct measure of GFP protein concentration to deduce the levels of WUS expression. The deduced WUS expression levels were then used to computationally model the spatial organization of WUS expression domain in wild-type SAMs.
-
Jönsson H., Heisler M., Reddy G.V., Agrawal V., Gor V., Shapiro B.E., Mjolsness E., and Meyerowitz E.M. Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem. Bioinformatics 21 S1 (2005) i232-i240. In this study, an image processing method has been employed to quantify GFP intensity from two-dimensional optical sections of RM cells, expressing an endoplasmic-reticulum-localized GFP under the influence of WUS promoter. The GFP intensity was taken as a direct measure of GFP protein concentration to deduce the levels of WUS expression. The deduced WUS expression levels were then used to computationally model the spatial organization of WUS expression domain in wild-type SAMs.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL.1
-
-
Jönsson, H.1
Heisler, M.2
Reddy, G.V.3
Agrawal, V.4
Gor, V.5
Shapiro, B.E.6
Mjolsness, E.7
Meyerowitz, E.M.8
-
22
-
-
0002011401
-
The chemical basis of morphogenesis
-
Parichy D.M., Rawls J.F., Pratt S.J., Whitfield T.T., Johnson S.L., and Turing A. The chemical basis of morphogenesis. Phil Trans R Soc Lond B 327 (1952) 37-72
-
(1952)
Phil Trans R Soc Lond B
, vol.327
, pp. 37-72
-
-
Parichy, D.M.1
Rawls, J.F.2
Pratt, S.J.3
Whitfield, T.T.4
Johnson, S.L.5
Turing, A.6
-
24
-
-
0025919498
-
Pigmentation pattern formation on snakes
-
Murray J., and Myerscough M. Pigmentation pattern formation on snakes. J Theor Biol 149 (1991) 339-360
-
(1991)
J Theor Biol
, vol.149
, pp. 339-360
-
-
Murray, J.1
Myerscough, M.2
-
25
-
-
0003475470
-
-
Springer Verlag, Berlin, Heidelberg
-
Murray J.D. Mathematical Biology (1993), Springer Verlag, Berlin, Heidelberg
-
(1993)
Mathematical Biology
-
-
Murray, J.D.1
-
26
-
-
33644850179
-
The CLAVATA1-related BAM1, BAM2 and BAM3 receptor kinase-like proteins are required for meristem function in Arabidopsis
-
DeYoung B.J., Bickle K.L., Schrage K.J., Muskett P., Patel K., and Clark S.E. The CLAVATA1-related BAM1, BAM2 and BAM3 receptor kinase-like proteins are required for meristem function in Arabidopsis. Plant J 45 (2006) 1-16
-
(2006)
Plant J
, vol.45
, pp. 1-16
-
-
DeYoung, B.J.1
Bickle, K.L.2
Schrage, K.J.3
Muskett, P.4
Patel, K.5
Clark, S.E.6
-
27
-
-
33745479866
-
Dynamic and compensatory responses of Arabidopsis shoot and floral meristems to CLV3 signaling
-
This work employs alcohol-inducible system to overexpress CLV3 and to follow changes in gene expression patterns and growth patterns in the SAMs of Arabidopsis.
-
Muller R., Borghi L., Kwiatkowska D., Laufs P., and Simon R. Dynamic and compensatory responses of Arabidopsis shoot and floral meristems to CLV3 signaling. Plant Cell 18 (2006) 1188-1198. This work employs alcohol-inducible system to overexpress CLV3 and to follow changes in gene expression patterns and growth patterns in the SAMs of Arabidopsis.
-
(2006)
Plant Cell
, vol.18
, pp. 1188-1198
-
-
Muller, R.1
Borghi, L.2
Kwiatkowska, D.3
Laufs, P.4
Simon, R.5
-
28
-
-
27344438574
-
Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex
-
This work combines dexamethasone-inducible system to achieve reduction of CLV3 levels and live-imaging to follow the changes in the organization of the stem-cell domain and changes in SAM growth. This study shows that CLV3 functions to prevent de-differentiation of PZ cells into stem cells and also functions to prevent the over-proliferation of PZ cells.
-
Reddy G.V., and Meyerowitz E.M. Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex. Science 310 (2005) 663-667. This work combines dexamethasone-inducible system to achieve reduction of CLV3 levels and live-imaging to follow the changes in the organization of the stem-cell domain and changes in SAM growth. This study shows that CLV3 functions to prevent de-differentiation of PZ cells into stem cells and also functions to prevent the over-proliferation of PZ cells.
-
(2005)
Science
, vol.310
, pp. 663-667
-
-
Reddy, G.V.1
Meyerowitz, E.M.2
-
29
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein B.E., Mikkelsen T.S., Xie X., Kamal M., Huebert D.J., Cuff J., Fry B., Meissner A., Wernig M., Plath K., et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125 (2006) 315-326
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
30
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen T.S., Ku M., Jaffe D.B., Issac B., Lieberman E., Giannoukos G., Alvarez P., Brockman W., Kim T.K., Koche R.P., Lee W., et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448 (2007) 553-560
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
Lee, W.11
-
31
-
-
0035846902
-
FASCIATA genes for chromatin assembly factor-1 in arabidopsis maintain the cellular organization of apical meristems
-
Kaya H., Shibahara K.I., Taoka K.I., Iwabuchi M., Stillman B., and Araki T. FASCIATA genes for chromatin assembly factor-1 in arabidopsis maintain the cellular organization of apical meristems. Cell 104 (2001) 131-142
-
(2001)
Cell
, vol.104
, pp. 131-142
-
-
Kaya, H.1
Shibahara, K.I.2
Taoka, K.I.3
Iwabuchi, M.4
Stillman, B.5
Araki, T.6
-
32
-
-
17444401034
-
WUSCHEL is a primary target for transcriptional regulation by SPLAYED in dynamic control of stem cell fate in Arabidopsis
-
Kwon C.S., Chen C., and Wagner D. WUSCHEL is a primary target for transcriptional regulation by SPLAYED in dynamic control of stem cell fate in Arabidopsis. Genes Dev 19 (2005) 992-1003
-
(2005)
Genes Dev
, vol.19
, pp. 992-1003
-
-
Kwon, C.S.1
Chen, C.2
Wagner, D.3
-
33
-
-
33748084700
-
Rb family proteins as modulators of gene expression and new aspects regarding the interaction with chromatin remodeling enzymes
-
Macaluso M., Montanari M., and Giordano A. Rb family proteins as modulators of gene expression and new aspects regarding the interaction with chromatin remodeling enzymes. Oncogene 25 (2006) 5263-5267
-
(2006)
Oncogene
, vol.25
, pp. 5263-5267
-
-
Macaluso, M.1
Montanari, M.2
Giordano, A.3
-
34
-
-
29244464678
-
The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots
-
This study combines conditional gene manipulation, cell ablations and live-imaging to analyze the function of RETINOBLASTOMA RELATED (RBR) protein in stem-cell specification and cell division in the root apical meristems of Arabidopsis.
-
Wildwater M., Campilho A., Perez-Perez J.M., Heidstra R., Blilou I., Korthout H., Chatterjee J., Mariconti L., Gruissem W., and Scheres B. The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots. Cell 123 (2005) 1337-1349. This study combines conditional gene manipulation, cell ablations and live-imaging to analyze the function of RETINOBLASTOMA RELATED (RBR) protein in stem-cell specification and cell division in the root apical meristems of Arabidopsis.
-
(2005)
Cell
, vol.123
, pp. 1337-1349
-
-
Wildwater, M.1
Campilho, A.2
Perez-Perez, J.M.3
Heidstra, R.4
Blilou, I.5
Korthout, H.6
Chatterjee, J.7
Mariconti, L.8
Gruissem, W.9
Scheres, B.10
-
35
-
-
33747100596
-
Induction of differentiation in the shoot apical meristem by transient overexpression of a retinoblastoma-related protein
-
Wyrzykowska J., Schorderet M., Pien S., Gruissem W., and Fleming A.J. Induction of differentiation in the shoot apical meristem by transient overexpression of a retinoblastoma-related protein. Plant Physiol 141 (2006) 1338-1348
-
(2006)
Plant Physiol
, vol.141
, pp. 1338-1348
-
-
Wyrzykowska, J.1
Schorderet, M.2
Pien, S.3
Gruissem, W.4
Fleming, A.J.5
-
36
-
-
33644876456
-
A protocol to analyse cellular dynamics during plant development
-
de Reuille P.B., Bohn-Courseau I., Godin C., and Traas J. A protocol to analyse cellular dynamics during plant development. Plant J 44 (2005) 1045-1053
-
(2005)
Plant J
, vol.44
, pp. 1045-1053
-
-
de Reuille, P.B.1
Bohn-Courseau, I.2
Godin, C.3
Traas, J.4
-
37
-
-
38749130830
-
-
Gor V, Bacarian T, Elowitz M, Mjolsness E. Tracking cell signals in fluorescent images. Workshop on Computer Vision in Bioinformatics, IEEE CVPR Annual Meeting, 2005. http://www.computableplant.org/.
-
-
-
-
38
-
-
0347447343
-
A gene expression map of the Arabidopsis root
-
Birnbaum K., Shasha D.E., Wang J.Y., Jung J.W., Lambert G.M., Galbriath D.W., and Benfey P.N. A gene expression map of the Arabidopsis root. Science 302 (2003) 1956-1960
-
(2003)
Science
, vol.302
, pp. 1956-1960
-
-
Birnbaum, K.1
Shasha, D.E.2
Wang, J.Y.3
Jung, J.W.4
Lambert, G.M.5
Galbriath, D.W.6
Benfey, P.N.7
|