A general pairwise interaction model provides an accurate description of in Vivo transcription factor binding sites

PLoS ONE

Volumn 9, Issue 6, 2014, Pages

  Santolini, Marc ^a   Mora, Thierry ^a   Hakim, Vincent ^a  

^a SORBONNE UNIVERSITÉ   (France)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; TRANSCRIPTION FACTOR; PROTEIN BINDING;

ANIMAL CELL; ARTICLE; BASE PAIRING; CHROMATIN IMMUNOPRECIPITATION; CONTROLLED STUDY; DNA BINDING; DNA FLANKING REGION; DNA STRUCTURE; DROSOPHILA MELANOGASTER; EMBRYO; ENTROPY; GENE REGULATORY NETWORK; IN VIVO STUDY; MOUSE; NONHUMAN; NUCLEOTIDE BINDING SITE; PAIRWISE INTERACTION MODEL; POSITION WEIGHT MATRIX; PREDICTION; PROTEIN MOTIF; ALGORITHM; ANIMAL; BINDING SITE; BIOLOGY; CELL CULTURE; DNA RESPONSIVE ELEMENT; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROCEDURES; THEORETICAL MODEL;

ALGORITHMS; ANIMALS; BASE SEQUENCE; BINDING SITES; CELLS, CULTURED; COMPUTATIONAL BIOLOGY; DROSOPHILA MELANOGASTER; MICE; MODELS, THEORETICAL; MOLECULAR SEQUENCE DATA; POSITION-SPECIFIC SCORING MATRICES; PROTEIN BINDING; RESPONSE ELEMENTS; TRANSCRIPTION FACTORS;

EID: 84903186941     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0099015     Document Type: Article

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