-
1
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel, D. (2009) MicroRNAs: Target recognition and regulatory functions. Cell, 136, 215-233.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.1
-
2
-
-
84878026283
-
MicroRNAs: A new ray of hope for diabetes mellitus
-
Kumar, M., Nath, S., Prasad, H., Sharma, G. and Li, Y. (2012) MicroRNAs: A new ray of hope for diabetes mellitus. Protein Cell, 3, 726-738.
-
(2012)
Protein Cell
, vol.3
, pp. 726-738
-
-
Kumar, M.1
Nath, S.2
Prasad, H.3
Sharma, G.4
Li, Y.5
-
3
-
-
67650711156
-
MicroRNAs in cancer
-
Garzon, R., Calin, G. and Croce, C. (2009) MicroRNAs in cancer. Annu. Rev. Med., 60, 167-179.
-
(2009)
Annu. Rev. Med.
, vol.60
, pp. 167-179
-
-
Garzon, R.1
Calin, G.2
Croce, C.3
-
4
-
-
67349273027
-
MicroRNA in autoimmunity and autoimmune diseases
-
Pauley, K., Cha, S. and Chan, E. (2009) MicroRNA in autoimmunity and autoimmune diseases. J. Autoimmun., 32, 189-194.
-
(2009)
J. Autoimmun.
, vol.32
, pp. 189-194
-
-
Pauley, K.1
Cha, S.2
Chan, E.3
-
5
-
-
28444469246
-
Silencing of microRNAs in vivo with 'antagomirs'
-
Kr̈ utzfeldt, J., Rajewsky, N., Braich, R., Rajeev, K., Tuschl, T., Manoharan, M. and Stoffel, M. (2005) Silencing of microRNAs in vivo with 'antagomirs'. Nature, 438, 685-689.
-
(2005)
Nature
, vol.438
, pp. 685-689
-
-
Kr̈utzfeldt, J.1
-
6
-
-
77956645422
-
The therapeutic potential of microRNA modulation
-
Jackson, A. and Linsley, P. (2010) The therapeutic potential of microRNA modulation. Discov. Med., 9, 311-318.
-
(2010)
Discov. Med.
, vol.9
, pp. 311-318
-
-
Jackson, A.1
Linsley, P.2
-
7
-
-
84858782897
-
Inhibition of microRNA function by antimi R oligonucleotides
-
Stenvang, J., Petri, A., Lindow, M., Obad, S. and Kauppinen, S. (2012) Inhibition of microRNA function by antimiR oligonucleotides. Silence, 3, 1.
-
(2012)
Silence
, vol.3
, pp. 1
-
-
Stenvang, J.1
Petri, A.2
Lindow, M.3
Obad, S.4
Kauppinen, S.5
-
8
-
-
13944282215
-
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
-
Lim, L., Lau, N., Garrett-Engele, P., Grimson, A., Schelter, J., Castle, J., Bartel, D., Linsley, P. and Johnson, J. (2005) Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature, 433, 769-773.
-
(2005)
Nature
, vol.433
, pp. 769-773
-
-
Lim, L.1
Lau, N.2
Garrett-Engele, P.3
Grimson, A.4
Schelter, J.5
Castle, J.6
Bartel, D.7
Linsley, P.8
Johnson, J.9
-
9
-
-
11844278458
-
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
-
Lewis, B., Burge, C. and Bartel, D. (2005) Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell, 120, 15-20.
-
(2005)
Cell
, vol.120
, pp. 15-20
-
-
Lewis, B.1
Burge, C.2
Bartel, D.3
-
10
-
-
57049175013
-
Detecting microRNA binding and siRNA off-target effects from expression data
-
van Dongen, S., Abreu-Goodger, C. and Enright, A. (2008) Detecting microRNA binding and siRNA off-target effects from expression data. Nat. Methods, 5, 1023-1025.
-
(2008)
Nat. Methods
, vol.5
, pp. 1023-1025
-
-
Van Dongen, S.1
Abreu-Goodger, C.2
Enright, A.3
-
11
-
-
34250805982
-
MicroRNA targeting specificity in mammals: Determinants beyond seed pairing
-
Grimson, A., Farh, K., Johnston, W., Garrett-Engele, P., Lim, L. and Bartel, D. (2007) MicroRNA targeting specificity in mammals: Determinants beyond seed pairing. Mol. Cell, 27, 91-105.
-
(2007)
Mol. Cell
, vol.27
, pp. 91-105
-
-
Grimson, A.1
Farh, K.2
Johnston, W.3
Garrett-Engele, P.4
Lim, L.5
Bartel, D.6
-
12
-
-
14044251458
-
Human microRNA targets
-
John, B., Enright, A., Aravin, A., Tuschl, T., Sander, C. and Marks, D. (2004) Human microRNA targets. PLoS Biol., 2, e363.
-
(2004)
PLoS Biol.
, vol.2
-
-
John, B.1
Enright, A.2
Aravin, A.3
Tuschl, T.4
Sander, C.5
Marks, D.6
-
13
-
-
20944450160
-
Combinatorial microRNA target predictions
-
Krek, A., Gr̈un, D., Poy, M., Wolf, R., Rosenberg, L., Epstein, E., MacMenamin, P., da Piedade, I., Gunsalus, K., Stoffel, M. et al. (2005) Combinatorial microRNA target predictions. Nat. Genet., 37, 495-500.
-
(2005)
Nat. Genet.
, vol.37
, pp. 495-500
-
-
Krek, A.1
-
14
-
-
34748821761
-
The role of site accessibility in microRNA target recognition
-
Kertesz, M., Iovino, N., Unnerstall, U., Gaul, U. and Segal, E. (2007) The role of site accessibility in microRNA target recognition. Nat. Genet., 39, 1278-1284.
-
(2007)
Nat. Genet.
, vol.39
, pp. 1278-1284
-
-
Kertesz, M.1
Iovino, N.2
Unnerstall, U.3
Gaul, U.4
Segal, E.5
-
15
-
-
79952791439
-
Practical aspects of microRNA target prediction
-
Witkos, T., Koscianska, E. and Krzyzosiak, W. (2011) Practical aspects of microRNA target prediction. Curr. Mol. Med., 11, 93-109.
-
(2011)
Curr. Mol. Med.
, vol.11
, pp. 93-109
-
-
Witkos, T.1
Koscianska, E.2
Krzyzosiak, W.3
-
16
-
-
84877258007
-
Treatment of HCV infection by targeting microRNA
-
Janssen, H., Reesink, H., Lawitz, E., Zeuzem, S., Rodriguez-Torres, M., Patel, K., van der Meer, A., Patick, A., Chen, A., Zhou, Y. et al. (2013) Treatment of HCV infection by targeting microRNA. N. Engl. J. Med., 368, 1685-1694.
-
(2013)
N. Engl. J. Med.
, vol.368
, pp. 1685-1694
-
-
Janssen, H.1
Reesink, H.2
Lawitz, E.3
Zeuzem, S.4
Rodriguez-Torres, M.5
Patel, K.6
Van Der Meer, A.7
Patick, A.8
Chen, A.9
Zhou, Y.10
-
17
-
-
84864773072
-
MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis
-
Tsai, W.-C., Hsu, S.-D., Hsu, C.-S., Lai, T.-C., Chen, S.-J., Shen, R., Huang, Y., Chen, H.-C., Lee, C.-H., Tsai, T.-F. et al. (2012) MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis. J. Clin. Invest., 122, 2884-2897.
-
(2012)
J. Clin. Invest.
, vol.122
, pp. 2884-2897
-
-
Tsai, W.-C.1
Hsu, S.-D.2
Hsu, C.-S.3
Lai, T.-C.4
Chen, S.-J.5
Shen, R.6
Huang, Y.7
Chen, H.-C.8
Lee, C.-H.9
Tsai, T.-F.10
-
18
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman, R., Carey, V., Bates, D., Bolstad, B., Dettling, M., Dudoit, S., Ellis, B., Gautier, L., Ge, Y., Gentry, J. et al. (2004) Bioconductor: Open software development for computational biology and bioinformatics. Genome Biol., 5, R80.
-
(2004)
Genome Biol.
, vol.5
-
-
Gentleman, R.1
Carey, V.2
Bates, D.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
-
19
-
-
33644872577
-
-
Gentleman, R, Vince, C, Huber, W, Irizarry, R and Dudoit, S (eds). Springer , New York
-
Smyth, G. (2005) Bioinformatics and computational biology solutions using R and Bioconductor. In: Gentleman, R, Vince, C, Huber, W, Irizarry, R and Dudoit, S (eds). Springer , New York, pp. 397-420.
-
(2005)
Bioinformatics and Computational Biology Solutions Using R and Bioconductor
, pp. 397-420
-
-
Smyth, G.1
-
20
-
-
78149259605
-
SylArray: A web server for automated detection of miRNA effects from expression data
-
Bartonicek, N. and Enright, A. (2010) SylArray: A web server for automated detection of miRNA effects from expression data. Bioinformatics, 26, 2900-2901.
-
(2010)
Bioinformatics
, vol.26
, pp. 2900-2901
-
-
Bartonicek, N.1
Enright, A.2
-
21
-
-
0036079158
-
The human genome browser at UCSC
-
Kent, W.J., Sugnet, C.W., Furey, T.S., Roskin, K.M., Pringle, T.H., Zahler, A.M. and Haussler, D. (2002) The Human Genome Browser at UCSC. Genome Res., 12, 996-1006.
-
(2002)
Genome Res.
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
Haussler, D.7
-
22
-
-
33751348560
-
Detection of the argonaute protein Ago2 and microRNAs in the RNA induced silencing complex (RISC) using a monoclonal antibody
-
Ikeda, K., Satoh, M., Pauley, K., Fritzler, M., Reeves, W. and Chan, E. (2006) Detection of the argonaute protein Ago2 and microRNAs in the RNA induced silencing complex (RISC) using a monoclonal antibody. J. Immunol. Methods, 317, 38-44.
-
(2006)
J. Immunol. Methods
, vol.317
, pp. 38-44
-
-
Ikeda, K.1
Satoh, M.2
Pauley, K.3
Fritzler, M.4
Reeves, W.5
Chan, E.6
-
23
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
research
-
Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B., Van Roy, N., De Paepe, A. and Speleman, F. (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol., 3, research 00341-003411.
-
(2002)
Genome Biol.
, vol.3
, pp. 00341-003411
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
24
-
-
45449087921
-
QBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
-
Hellemans, J., Mortier, G., De Paepe, A., Speleman, F. and Vandesompele, J. (2007) qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol., 8, R19.
-
(2007)
Genome Biol.
, vol.8
-
-
Hellemans, J.1
Mortier, G.2
De Paepe, A.3
Speleman, F.4
Vandesompele, J.5
-
25
-
-
80555150587
-
MiRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
-
Fabian, M., Cieplak, M., Frank, F., Morita, M., Green, J., Srikumar, T., Nagar, B., Yamamoto, T., Raught, B., Duchaine, T. et al. (2011) miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT. Nat. Struct. Mol. Biol., 18, 1211-1217.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1211-1217
-
-
Fabian, M.1
Cieplak, M.2
Frank, F.3
Morita, M.4
Green, J.5
Srikumar, T.6
Nagar, B.7
Yamamoto, T.8
Raught, B.9
Duchaine, T.10
-
26
-
-
84875190908
-
The interactions of GW182 proteins with PABP and deadenylases are required for both translational repression and degradation of miRNA targets
-
Huntzinger, E., Kuzuoglu-Öztürk, D., Braun, J., Eulalio, A., Wohlbold, L. and Izaurralde, E. (2013) The interactions of GW182 proteins with PABP and deadenylases are required for both translational repression and degradation of miRNA targets. Nucleic Acids Res., 41, 978-994.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 978-994
-
-
Huntzinger, E.1
-
27
-
-
58149186499
-
MiRecords: An integrated resource for microRNA-target interactions
-
Xiao, F., Zuo, Z., Cai, G., Kang, S., Gao, X. and Li, T. (2009) miRecords: An integrated resource for microRNA-target interactions. Nucleic Acids Res., 37, D105-D110.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Xiao, F.1
Zuo, Z.2
Cai, G.3
Kang, S.4
Gao, X.5
Li, T.6
-
28
-
-
79959805164
-
MiRWalk-database: Prediction of possible miRNA binding sites by walking the genes of three genomes
-
Dweep, H., Sticht, C., Pandey, P. and Gretz, N. (2011) miRWalk-database: Prediction of possible miRNA binding sites by "walking" the genes of three genomes. J. Biomed. Inform., 44, 839-847.
-
(2011)
J. Biomed. Inform.
, vol.44
, pp. 839-847
-
-
Dweep, H.1
Sticht, C.2
Pandey, P.3
Gretz, N.4
-
29
-
-
78651266827
-
MiRTarBase: A database curates experimentally validated microRNA-target interactions
-
Hsu, S.D., Lin, F.M., Wu, W.Y., Liang, C., Huang, W.C., Chan, W.L., Tsai, W.T., Chen, G.Z., Lee, C.J., Chiu, C.M. et al. (2011) miRTarBase: A database curates experimentally validated microRNA-target interactions. Nucleic Acids Res., 39, D163-D169.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Hsu, S.D.1
Lin, F.M.2
Wu, W.Y.3
Liang, C.4
Huang, W.C.5
Chan, W.L.6
Tsai, W.T.7
Chen, G.Z.8
Lee, C.J.9
Chiu, C.M.10
-
30
-
-
38649105459
-
MiR-122 targeting with LNA/2'-O-methyl oligonucleotide mixmers, peptide nucleic acids (PNA), and PNA-peptide conjugates
-
Fabani, M. and Gait, M. (2008) miR-122 targeting with LNA/2'-O-methyl oligonucleotide mixmers, peptide nucleic acids (PNA), and PNA-peptide conjugates. RNA, 14, 336-346.
-
(2008)
RNA
, vol.14
, pp. 336-346
-
-
Fabani, M.1
Gait, M.2
-
31
-
-
40249106014
-
Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver
-
Elḿen, J., Lindow, M., Silahtaroglu, A., Bak, M., Christensen, M., Lind-Thomsen, A., Hedtj̈arn, M., Hansen, J., Hansen, H., Straarup, E. et al. (2008) Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver. Nucleic Acids Res., 36, 1153-1162.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 1153-1162
-
-
Elḿen, J.1
Lindow, M.2
Silahtaroglu, A.3
Bak, M.4
Christensen, M.5
Lind-Thomsen, A.6
Hedtj̈arn, M.7
Hansen, J.8
Hansen, H.9
Straarup, E.10
-
32
-
-
66149114383
-
MicroRNA-122, a tumor suppressor microRNA that regulates intrahepatic metastasis of hepatocellular carcinoma
-
Tsai, W.-C., Hsu, P., Lai, T.-C., Chau, G.-Y., Lin, C.-W., Chen, C.-M., Lin, C.-D., Liao, Y.-L., Wang, J.-L., Chau, Y.-P. et al. (2009) MicroRNA-122, a tumor suppressor microRNA that regulates intrahepatic metastasis of hepatocellular carcinoma. Hepatology, 49, 1571-1582.
-
(2009)
Hepatology
, vol.49
, pp. 1571-1582
-
-
Tsai, W.-C.1
Hsu, P.2
Lai, T.-C.3
Chau, G.-Y.4
Lin, C.-W.5
Chen, C.-M.6
Lin, C.-D.7
Liao, Y.-L.8
Wang, J.-L.9
Chau, Y.-P.10
-
33
-
-
34447117003
-
Cyclin G1 is a target of miR-122a, a microRNA frequently down-regulated in human hepatocellular carcinoma
-
Gramantieri, L., Ferracin, M., Fornari, F., Veronese, A., Sabbioni, S., Liu, C.-G., Calin, G., Giovannini, C., Ferrazzi, E., Grazi, G. et al. (2007) Cyclin G1 is a target of miR-122a, a microRNA frequently down-regulated in human hepatocellular carcinoma. Cancer Res., 67, 6092-6099.
-
(2007)
Cancer Res.
, vol.67
, pp. 6092-6099
-
-
Gramantieri, L.1
Ferracin, M.2
Fornari, F.3
Veronese, A.4
Sabbioni, S.5
Liu, C.-G.6
Calin, G.7
Giovannini, C.8
Ferrazzi, E.9
Grazi, G.10
-
34
-
-
50849115468
-
MiR-122 targets an anti-apoptotic gene, Bcl-w, in human hepatocellular carcinoma cell lines
-
Lin, C., Gong, H.-Y., Tseng, H.-C., Wang, W.-L. and Wu, J.-L. (2008) miR-122 targets an anti-apoptotic gene, Bcl-w, in human hepatocellular carcinoma cell lines. Biochem. Biophys. Res. Commun., 375, 315-320.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.375
, pp. 315-320
-
-
Lin, C.1
Gong, H.-Y.2
Tseng, H.-C.3
Wang, W.-L.4
Wu, J.-L.5
-
35
-
-
77957954445
-
Liver-enriched transcription factors regulate microRNA-122 that targets CUTL1 during liver development
-
Xu, H., He, J.-H., Xiao, Z.-D., Zhang, Q.-Q., Chen, Y.-Q., Zhou, H. and Qu, L.-H. (2010) Liver-enriched transcription factors regulate microRNA-122 that targets CUTL1 during liver development. Hepatology, 52, 1431-1442.
-
(2010)
Hepatology
, vol.52
, pp. 1431-1442
-
-
Xu, H.1
He, J.-H.2
Xiao, Z.-D.3
Zhang, Q.-Q.4
Chen, Y.-Q.5
Zhou, H.6
Qu, L.-H.7
-
36
-
-
0037443089
-
SiRNAs can function as miRNAs
-
Doench, J., Petersen, C. and Sharp, P. (2003) siRNAs can function as miRNAs. Genes Dev., 17, 438-442.
-
(2003)
Genes Dev.
, vol.17
, pp. 438-442
-
-
Doench, J.1
Petersen, C.2
Sharp, P.3
-
37
-
-
33947431322
-
Disrupting the pairing between let-7 and Hmga2 enhances oncogenic transformation
-
Mayr, C., Hemann, M. and Bartel, D. (2007) Disrupting the pairing between let-7 and Hmga2 enhances oncogenic transformation. Science, 315, 1576-1579.
-
(2007)
Science
, vol.315
, pp. 1576-1579
-
-
Mayr, C.1
Hemann, M.2
Bartel, D.3
-
38
-
-
84934439280
-
Working together: Combinatorial regulation by microRNAs
-
Friedman, Y., Balaga, O. and Linial, M. (2013) Working together: Combinatorial regulation by microRNAs. Adv. Exp. Med. Biol., 774, 317-337.
-
(2013)
Adv. Exp. Med. Biol.
, vol.774
, pp. 317-337
-
-
Friedman, Y.1
Balaga, O.2
Linial, M.3
-
39
-
-
54049090778
-
Combinatorial microRNAs: Working together to make a difference
-
Ivanovska, I. and Cleary, M. (2008) Combinatorial microRNAs: Working together to make a difference. Cell Cycle, 7, 3137-3142.
-
(2008)
Cell Cycle
, vol.7
, pp. 3137-3142
-
-
Ivanovska, I.1
Cleary, M.2
-
40
-
-
34848922072
-
MiRNAs play a tune
-
Hobert, O. (2007) miRNAs play a tune. Cell, 131, 22-24.
-
(2007)
Cell
, vol.131
, pp. 22-24
-
-
Hobert, O.1
-
41
-
-
77950920903
-
Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP
-
Hafner, M., Landthaler, M., Burger, L., Khorshid, M., Hausser, J., Berninger, P., Rothballer, A., Ascano, M., Jungkamp, A.-C., Munschauer, M. et al. (2010) Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP. Cell, 141, 129-141.
-
(2010)
Cell
, vol.141
, pp. 129-141
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano, M.8
Jungkamp, A.-C.9
Munschauer, M.10
-
42
-
-
67749132423
-
Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
-
Chi, S., Zang, J., Mele, A. and Darnell, R. (2009) Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps. Nature, 460, 479-486.
-
(2009)
Nature
, vol.460
, pp. 479-486
-
-
Chi, S.1
Zang, J.2
Mele, A.3
Darnell, R.4
-
43
-
-
64549109671
-
Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells
-
Haraguchi, T., Ozaki, Y. and Iba, H. (2009) Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells. Nucleic Acids Res, 37, e43.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Haraguchi, T.1
Ozaki, Y.2
Iba, H.3
-
44
-
-
84864059847
-
Disease-linked microRNA-21 exhibits drastically reduced mRNA binding and silencing activity in healthy mouse liver
-
Androsavich, J., Chau, B., Bhat, B., Linsley, P. and Walter, N. (2012) Disease-linked microRNA-21 exhibits drastically reduced mRNA binding and silencing activity in healthy mouse liver. RNA, 18, 1510-1526.
-
(2012)
RNA
, vol.18
, pp. 1510-1526
-
-
Androsavich, J.1
Chau, B.2
Bhat, B.3
Linsley, P.4
Walter, N.5
-
45
-
-
80455154984
-
Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs
-
Garcia, D.M., Baek, D., Shin, C., Bell, G.W., Grimson, A. and Bartel, D.P. (2011) Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs. Nat. Struct. Mol. Biol., 18, 1139-1146.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 1139-1146
-
-
Garcia, D.M.1
Baek, D.2
Shin, C.3
Bell, G.W.4
Grimson, A.5
Bartel, D.P.6
-
46
-
-
84860389888
-
RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries
-
Hafner, M., Renwick, N., Brown, M., Mihailovíc, A., Holoch, D., Lin, C., Pena, J.T., Nusbaum, J.D., Morozov, P., Ludwig, J. et al. (2011) RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries. RNA, 17, 1697-1712.
-
(2011)
RNA
, vol.17
, pp. 1697-1712
-
-
Hafner, M.1
Renwick, N.2
Brown, M.3
Mihailovíc, A.4
Holoch, D.5
Lin, C.6
Pena, J.T.7
Nusbaum, J.D.8
Morozov, P.9
Ludwig, J.10
-
47
-
-
37649021046
-
Identification of human microRNA targets from isolated argonaute protein complexes
-
Beitzinger, M., Peters, L., Zhu, J., Kremmer, E. and Meister, G. (2007) Identification of human microRNA targets from isolated argonaute protein complexes. RNA Biol., 4, 76-84.
-
(2007)
RNA Biol.
, vol.4
, pp. 76-84
-
-
Beitzinger, M.1
Peters, L.2
Zhu, J.3
Kremmer, E.4
Meister, G.5
-
48
-
-
77954573536
-
Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay
-
D̈olken, L., Malterer, G., Erhard, F., Kothe, S., Friedel, C., Suffert, G., Marcinowski, L., Motsch, N., Barth, S., Beitzinger, M. et al. (2010) Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay. Cell Host Microbe, 7, 324-334.
-
(2010)
Cell Host Microbe
, vol.7
, pp. 324-334
-
-
D̈olken, L.1
Malterer, G.2
Erhard, F.3
Kothe, S.4
Friedel, C.5
Suffert, G.6
Marcinowski, L.7
Motsch, N.8
Barth, S.9
Beitzinger, M.10
-
49
-
-
47749154078
-
Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance
-
Hendrickson, D., Hogan, D., Herschlag, D., Ferrell, J. and Brown, P. (2008) Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance. PloS One, 3, e2126.
-
(2008)
PloS One
, vol.3
-
-
Hendrickson, D.1
Hogan, D.2
Herschlag, D.3
Ferrell, J.4
Brown, P.5
-
50
-
-
37648999735
-
A biochemical approach to identifying microRNA targets
-
Karginov, F., Conaco, C., Xuan, Z., Schmidt, B., Parker, J., Mandel, G. and Hannon, G. (2007) A biochemical approach to identifying microRNA targets. Proc. Natl. Acad. Sci. U.S.A., 104, 19291-19296.
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, pp. 19291-19296
-
-
Karginov, F.1
Conaco, C.2
Xuan, Z.3
Schmidt, B.4
Parker, J.5
Mandel, G.6
Hannon, G.7
-
51
-
-
57049148002
-
Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs
-
Landthaler, M., Gaidatzis, D., Rothballer, A., Chen, P., Soll, S., Dinic, L., Ojo, T., Hafner, M., Zavolan, M. and Tuschl, T. (2008) Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs. RNA, 14, 2580-2596.
-
(2008)
RNA
, vol.14
, pp. 2580-2596
-
-
Landthaler, M.1
Gaidatzis, D.2
Rothballer, A.3
Chen, P.4
Soll, S.5
Dinic, L.6
Ojo, T.7
Hafner, M.8
Zavolan, M.9
Tuschl, T.10
-
52
-
-
79251641860
-
RISC RNA sequencing for context-specific identification of in vivo microRNA targets
-
Matkovich, S., Van Booven, D., Eschenbacher, W. and Dorn, G. (2011) RISC RNA sequencing for context-specific identification of in vivo microRNA targets. Circ. Res., 108, 18-26.
-
(2011)
Circ. Res.
, vol.108
, pp. 18-26
-
-
Matkovich, S.1
Van Booven, D.2
Eschenbacher, W.3
Dorn, G.4
-
53
-
-
57049089111
-
Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140
-
Nicolas, F., Pais, H., Schwach, F., Lindow, M., Kauppinen, S., Moulton, V. and Dalmay, T. (2008) Experimental identification of microRNA-140 targets by silencing and overexpressing miR-140. RNA, 14, 2513-2520.
-
(2008)
RNA
, vol.14
, pp. 2513-2520
-
-
Nicolas, F.1
Pais, H.2
Schwach, F.3
Lindow, M.4
Kauppinen, S.5
Moulton, V.6
Dalmay, T.7
-
54
-
-
77951193389
-
Tandem affinity purification of miRNA target mRNAs (TAP-Tar)
-
Nonne, N., Ameyar-Zazoua, M., Souidi, M. and Harel-Bellan, A. (2010) Tandem affinity purification of miRNA target mRNAs (TAP-Tar). Nucleic Acids Res., 38, e20.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Nonne, N.1
Ameyar-Zazoua, M.2
Souidi, M.3
Harel-Bellan, A.4
-
55
-
-
76149141556
-
A high throughput experimental approach to identify miRNA targets in human cells
-
Tan, L., Seinen, E., Duns, G., de Jong, D., Sibon, O., Poppema, S., Kroesen, B.-J., Kok, K. and van den Berg, A. (2009) A high throughput experimental approach to identify miRNA targets in human cells. Nucleic Acids Res., 37, e137.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Tan, L.1
Seinen, E.2
Duns, G.3
De Jong, D.4
Sibon, O.5
Poppema, S.6
Kroesen, B.-J.7
Kok, K.8
Van Den Berg, A.9
-
56
-
-
75149163985
-
Anti-Argonaute RIP-Chip shows that miRNA transfections alter global patterns of mRNA recruitment to microribonucleoprotein complexes
-
Wang, W.-X., Wilfred, B., Hu, Y., Stromberg, A. and Nelson, P. (2010) Anti-Argonaute RIP-Chip shows that miRNA transfections alter global patterns of mRNA recruitment to microribonucleoprotein complexes. RNA, 16, 394-404.
-
(2010)
RNA
, vol.16
, pp. 394-404
-
-
Wang, W.-X.1
Wilfred, B.2
Hu, Y.3
Stromberg, A.4
Nelson, P.5
-
57
-
-
7044272280
-
Evidence for reassociation of RNA-binding proteins after cell lysis: Implications for the interpretation of immunoprecipitation analyses
-
Mili, S. and Steitz, J. (2004) Evidence for reassociation of RNA-binding proteins after cell lysis: Implications for the interpretation of immunoprecipitation analyses. RNA, 10, 1692-1694.
-
(2004)
RNA
, vol.10
, pp. 1692-1694
-
-
Mili, S.1
Steitz, J.2
-
58
-
-
77951092028
-
Multiple microRNAs modulate p21Cip1/Waf1 expression by directly targeting its 3-untranslated region
-
Wu, S., Huang, S., Ding, J., Zhao, Y., Liang, L., Liu, T., Zhan, R. and He, X. (2010) Multiple microRNAs modulate p21Cip1/Waf1 expression by directly targeting its 3-untranslated region. Oncogene, 29, 2302-2308.
-
(2010)
Oncogene
, vol.29
, pp. 2302-2308
-
-
Wu, S.1
Huang, S.2
Ding, J.3
Zhao, Y.4
Liang, L.5
Liu, T.6
Zhan, R.7
He, X.8
-
59
-
-
69049089919
-
Systematic validation of predicted microRNAs for cyclin D1
-
Jiang, Q., Feng, M.-G. and Mo, Y.-Y. (2009) Systematic validation of predicted microRNAs for cyclin D1. BMC Cancer, 9, 194.
-
(2009)
BMC Cancer
, vol.9
, pp. 194
-
-
Jiang, Q.1
Feng, M.-G.2
Mo, Y.-Y.3
-
60
-
-
33750370444
-
MicroRNA signatures in human cancers
-
Calin, G. and Croce, C. (2006) MicroRNA signatures in human cancers. Nat. Rev. Cancer, 6, 857-866.
-
(2006)
Nat. Rev. Cancer
, vol.6
, pp. 857-866
-
-
Calin, G.1
Croce, C.2
-
61
-
-
84878113369
-
The shaping and functional consequences of the microRNA landscape in breast cancer
-
Dvinge, H., Git, A., Gr̈af, S., Salmon-Divon, M., Curtis, C., Sottoriva, A., Zhao, Y., Hirst, M., Armisen, J., Miska, E. et al. (2013) The shaping and functional consequences of the microRNA landscape in breast cancer. Nature, 497, 378-382.
-
(2013)
Nature
, vol.497
, pp. 378-382
-
-
Dvinge, H.1
Git, A.2
Gr̈af, S.3
Salmon-Divon, M.4
Curtis, C.5
Sottoriva, A.6
Zhao, Y.7
Hirst, M.8
Armisen, J.9
Miska, E.10
-
62
-
-
33744973775
-
Relief of microRNA-mediated translational repression in human cells subjected to stress
-
Bhattacharyya, S., Habermacher, R., Martine, U., Closs, E. and Filipowicz, W. (2006) Relief of microRNA-mediated translational repression in human cells subjected to stress. Cell, 125, 1111-1124.
-
(2006)
Cell
, vol.125
, pp. 1111-1124
-
-
Bhattacharyya, S.1
Habermacher, R.2
Martine, U.3
Closs, E.4
Filipowicz, W.5
-
63
-
-
77957564277
-
A Pumilio-induced RNA structure switch in p27-3-UTR controls miR-221 and miR-222 accessibility
-
Kedde, M., van Kouwenhove, M., Zwart, W., Oude Vrielink, J., Elkon, R. and Agami, R. (2010) A Pumilio-induced RNA structure switch in p27-3-UTR controls miR-221 and miR-222 accessibility. Nat. Cell Biol., 12, 1014-1020.
-
(2010)
Nat. Cell Biol.
, vol.12
, pp. 1014-1020
-
-
Kedde, M.1
Van Kouwenhove, M.2
Zwart, W.3
Oude Vrielink, J.4
Elkon, R.5
Agami, R.6
|