메뉴 건너뛰기




Volumn 3, Issue 6, 2014, Pages 340-346

Thrombin-mediated transcriptional regulation using DNA aptamers in DNA-based cell-free protein synthesis

Author keywords

cell free systems; DNA aptamer; T7 promoters; thrombin; transcriptional regulation

Indexed keywords

APTAMER; DNA; DNA BINDING PROTEIN; LIGAND; SINGLE STRANDED DNA; THROMBIN;

EID: 84903178620     PISSN: None     EISSN: 21615063     Source Type: Journal    
DOI: 10.1021/sb4000756     Document Type: Article
Times cited : (31)

References (72)
  • 2
    • 0034688174 scopus 로고    scopus 로고
    • Construction of a genetic toggle switch in Escherichia coli
    • DOI 10.1038/35002131
    • Gardner, T. S., Cantor, C. R., and Collins, J. J. (2000) Construction of a genetic toggle switch in Escherichia coli Nature 403, 339-342 (Pubitemid 30062394)
    • (2000) Nature , vol.403 , Issue.6767 , pp. 339-342
    • Gardner, T.S.1    Cantor, C.R.2    Collins, J.J.3
  • 3
    • 4344703213 scopus 로고    scopus 로고
    • BioLogic gates enable logical transcription control in mammalian cells
    • DOI 10.1002/bit.20142
    • Kramer, B. P., Fischer, C., and Fussenegger, M. (2004) BioLogic gates enable logical transcription control in mammalian cells Biotechnol. Bioeng. 87, 478-484 (Pubitemid 39150049)
    • (2004) Biotechnology and Bioengineering , vol.87 , Issue.4 , pp. 478-484
    • Kramer, B.P.1    Fischer, C.2    Fussenegger, M.3
  • 4
    • 80055035853 scopus 로고    scopus 로고
    • Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology
    • Wang, B., Kitney, R. I., Joly, N., and Buck, M. (2011) Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology Nat. Commun. 2, 508
    • (2011) Nat. Commun. , vol.2 , pp. 508
    • Wang, B.1    Kitney, R.I.2    Joly, N.3    Buck, M.4
  • 6
    • 0034688173 scopus 로고    scopus 로고
    • A synthetic oscillatory network of transcriptional regulators
    • DOI 10.1038/35002125
    • Elowitz, M. B. and Leibler, S. (2000) A synthetic oscillatory network of transcriptional regulators Nature 403, 335-338 (Pubitemid 30062393)
    • (2000) Nature , vol.403 , Issue.6767 , pp. 335-338
    • Elowitz, M.B.1    Leibier, S.2
  • 7
    • 57049159362 scopus 로고    scopus 로고
    • A fast, robust and tunable synthetic gene oscillator
    • DOI 10.1038/nature07389, PII NATURE07389
    • Stricker, J., Cookson, S., Bennett, M. R., Mather, W. H., Tsimring, L. S., and Hasty, J. (2008) A fast, robust and tunable synthetic gene oscillator Nature 456, 516-519 (Pubitemid 352759003)
    • (2008) Nature , vol.456 , Issue.7221 , pp. 516-519
    • Stricker, J.1    Cookson, S.2    Bennett, M.R.3    Mather, W.H.4    Tsimring, L.S.5    Hasty, J.6
  • 8
    • 84880084177 scopus 로고    scopus 로고
    • Synthetic biology and metabolic engineering approaches to produce biofuels
    • Rabinovitch-Deere, C. A., Oliver, J. W., Rodriguez, G. M., and Atsumi, S. (2013) Synthetic biology and metabolic engineering approaches to produce biofuels Chem. Rev. 113, 4611-4632
    • (2013) Chem. Rev. , vol.113 , pp. 4611-4632
    • Rabinovitch-Deere, C.A.1    Oliver, J.W.2    Rodriguez, G.M.3    Atsumi, S.4
  • 9
    • 77951107086 scopus 로고    scopus 로고
    • Synthetic biology: Applications come of age
    • Khalil, A. S. and Collins, J. J. (2010) Synthetic biology: applications come of age Nat. Rev. Genet. 11, 367-379
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 367-379
    • Khalil, A.S.1    Collins, J.J.2
  • 10
    • 33745454125 scopus 로고    scopus 로고
    • Synthetic biology: New engineering rules for an emerging discipline
    • Andrianantoandro, E., Basu, S., Karig, D. K., and Weiss, R. (2006) Synthetic biology: new engineering rules for an emerging discipline Mol. Syst. Biol. 2, 0028
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 0028
    • Andrianantoandro, E.1    Basu, S.2    Karig, D.K.3    Weiss, R.4
  • 11
    • 66249088017 scopus 로고    scopus 로고
    • The second wave of synthetic biology: From modules to systems
    • Purnick, P. E. and Weiss, R. (2009) The second wave of synthetic biology: from modules to systems Nat. Rev. Mol. Cell Biol. 10, 410-422
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , pp. 410-422
    • Purnick, P.E.1    Weiss, R.2
  • 12
    • 79952775158 scopus 로고    scopus 로고
    • Development of an artificial cell, from self-organization to computation and self-reproduction
    • Noireaux, V., Maeda, Y. T., and Libchaber, A. (2011) Development of an artificial cell, from self-organization to computation and self-reproduction Proc. Natl. Acad. Sci. U. S. A. 108, 3473-3480
    • (2011) Proc. Natl. Acad. Sci. U. S. A. , vol.108 , pp. 3473-3480
    • Noireaux, V.1    Maeda, Y.T.2    Libchaber, A.3
  • 13
    • 53949093950 scopus 로고    scopus 로고
    • An integrated cell-free metabolic platform for protein production and synthetic biology
    • Jewett, M. C., Calhoun, K. A., Voloshin, A., Wuu, J. J., and Swartz, J. R. (2008) An integrated cell-free metabolic platform for protein production and synthetic biology Mol. Syst. Biol. 4, 220
    • (2008) Mol. Syst. Biol. , vol.4 , pp. 220
    • Jewett, M.C.1    Calhoun, K.A.2    Voloshin, A.3    Wuu, J.J.4    Swartz, J.R.5
  • 14
    • 83255164998 scopus 로고    scopus 로고
    • Cell-free synthetic biology: Thinking outside the cell
    • Eric Hodgman, C. and Jewett, M. C. (2011) Cell-free synthetic biology: Thinking outside the cell Metab. Eng. 14, 261-269
    • (2011) Metab. Eng. , vol.14 , pp. 261-269
    • Eric Hodgman, C.1    Jewett, M.C.2
  • 15
    • 33846108672 scopus 로고    scopus 로고
    • Cell-free synthetic biology: A bottom-up approach to discovery by design
    • Simpson, M. L. (2006) Cell-free synthetic biology: a bottom-up approach to discovery by design Mol. Syst. Biol. 2, 69
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 69
    • Simpson, M.L.1
  • 17
    • 79551586208 scopus 로고    scopus 로고
    • Programming an in vitro DNA oscillator using a molecular networking strategy
    • Montagne, K., Plasson, R., Sakai, Y., Fujii, T., and Rondelez, Y. (2011) Programming an in vitro DNA oscillator using a molecular networking strategy Mol. Syst. Biol. 7, 466
    • (2011) Mol. Syst. Biol. , vol.7 , pp. 466
    • Montagne, K.1    Plasson, R.2    Sakai, Y.3    Fujii, T.4    Rondelez, Y.5
  • 18
    • 33846116559 scopus 로고    scopus 로고
    • Construction of an in vitro bistable circuit from synthetic transcriptional switches
    • Kim, J., White, K. S., and Winfree, E. (2006) Construction of an in vitro bistable circuit from synthetic transcriptional switches Mol. Syst. Biol. 2, 68
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 68
    • Kim, J.1    White, K.S.2    Winfree, E.3
  • 19
    • 79551599731 scopus 로고    scopus 로고
    • Synthetic in vitro transcriptional oscillators
    • Kim, J. and Winfree, E. (2011) Synthetic in vitro transcriptional oscillators Mol. Syst. Biol. 7, 465
    • (2011) Mol. Syst. Biol. , vol.7 , pp. 465
    • Kim, J.1    Winfree, E.2
  • 21
    • 84860375823 scopus 로고    scopus 로고
    • Expression optimization and synthetic gene networks in cell-free systems
    • Karig, D. K., Iyer, S., Simpson, M. L., and Doktycz, M. J. (2012) Expression optimization and synthetic gene networks in cell-free systems Nucleic Acids Res. 40, 3763-3774
    • (2012) Nucleic Acids Res. , vol.40 , pp. 3763-3774
    • Karig, D.K.1    Iyer, S.2    Simpson, M.L.3    Doktycz, M.J.4
  • 22
    • 84863610029 scopus 로고    scopus 로고
    • An E coli cell-free expression toolbox: Application to synthetic gene circuits and artificial cells
    • Shin, J. and Noireaux, V. (2012) An E. coli cell-free expression toolbox: Application to synthetic gene circuits and artificial cells ACS Synth. Biol. 1, 29-41
    • (2012) ACS Synth. Biol. , vol.1 , pp. 29-41
    • Shin, J.1    Noireaux, V.2
  • 24
    • 0023042283 scopus 로고
    • Use of bacteriophage-T7 RNA-polymerase to direct selective high-level expression of cloned genes
    • Studier, F. W. and Moffatt, B. A. (1986) Use of bacteriophage-T7 RNA-polymerase to direct selective high-level expression of cloned genes J. Mol. Biol. 189, 113-130
    • (1986) J. Mol. Biol. , vol.189 , pp. 113-130
    • Studier, F.W.1    Moffatt, B.A.2
  • 25
    • 79952578982 scopus 로고    scopus 로고
    • Construction of a novel glucose-sensing molecule based on a substrate-binding protein for intracellular sensing
    • Sakaguchi-Mikami, A., Taniguchi, A., Sode, K., and Yamazaki, T. (2010) Construction of a novel glucose-sensing molecule based on a substrate-binding protein for intracellular sensing Biotechnol. Bioeng. 108, 725-733
    • (2010) Biotechnol. Bioeng. , vol.108 , pp. 725-733
    • Sakaguchi-Mikami, A.1    Taniguchi, A.2    Sode, K.3    Yamazaki, T.4
  • 26
    • 1942477463 scopus 로고    scopus 로고
    • Ligand-mediated transcription elongation control using triplex-based padlock oligonucleotides
    • DOI 10.1016/j.chembiol.2004.03.016, PII S1074552104000936
    • Bello-Roufai, M., Roulon, T., and Escude, C. (2004) Ligand-mediated transcription elongation control using triplex-based padlock oligonucleotides Chem. Biol. 11, 509-516 (Pubitemid 38503585)
    • (2004) Chemistry and Biology , vol.11 , Issue.4 , pp. 509-516
    • Bello-Roufai, M.1    Roulon, T.2    Escude, C.3
  • 27
    • 0027231901 scopus 로고
    • Repression of bacteriophage promoters by DNA and RNA oligonucleotides
    • Skoog, J. U. and Maher, L. J., 3rd. (1993) Repression of bacteriophage promoters by DNA and RNA oligonucleotides Nucleic Acids Res. 21, 2131-2138 (Pubitemid 23160731)
    • (1993) Nucleic Acids Research , vol.21 , Issue.9 , pp. 2131-2138
    • Skoog, J.U.1    Maher III, L.J.2
  • 28
    • 0032513006 scopus 로고    scopus 로고
    • On the mechanism of inhibition of phage T7 RNA polymerase by lac repressor
    • DOI 10.1006/jmbi.1997.1576
    • Lopez, P. J., Guillerez, J., Sousa, R., and Dreyfus, M. (1998) On the mechanism of inhibition of phage T7 RNA polymerase by lac repressor J. Mol. Biol. 276, 861-875 (Pubitemid 28130260)
    • (1998) Journal of Molecular Biology , vol.276 , Issue.5 , pp. 861-875
    • Lopez, P.J.1    Guillerez, J.2    Sousa, R.3    Dreyfus, M.4
  • 29
    • 31444454427 scopus 로고    scopus 로고
    • Azobenzene-tethered T7 promoter for efficient photoregulation of transcription
    • DOI 10.1021/ja055983k
    • Liu, M., Asanuma, H., and Komiyama, M. (2006) Azobenzene-tethered T7 promoter for efficient photoregulation of transcription J. Am. Chem. Soc. 128, 1009-1015 (Pubitemid 43153050)
    • (2006) Journal of the American Chemical Society , vol.128 , Issue.3 , pp. 1009-1015
    • Liu, M.1    Asanuma, H.2    Komiyama, M.3
  • 30
    • 0026803326 scopus 로고
    • Inhibition of T7 RNA polymerase initiation by triple-helical DNA complexes: A model for artificial gene repression
    • Maher, L. J., 3rd. (1992) Inhibition of T7 RNA polymerase initiation by triple-helical DNA complexes: a model for artificial gene repression Biochemistry 31, 7587-7594
    • (1992) Biochemistry , vol.31 , pp. 7587-7594
    • Maher III, L.J.1
  • 31
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington, A. D. and Szostak, J. W. (1990) In vitro selection of RNA molecules that bind specific ligands Nature 346, 818-822
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 32
    • 21444457242 scopus 로고    scopus 로고
    • Programmable ligand-controlled riboregulators of eukaryotic gene expression
    • DOI 10.1038/nbt1069
    • Bayer, T. S. and Smolke, C. D. (2005) Programmable ligand-controlled riboregulators of eukaryotic gene expression Nat. Biotechnol. 23, 337-343 (Pubitemid 41094422)
    • (2005) Nature Biotechnology , vol.23 , Issue.3 , pp. 337-343
    • Bayer, T.S.1    Smolke, C.D.2
  • 33
    • 84863226500 scopus 로고    scopus 로고
    • Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals
    • Qi, L., Lucks, J. B., Liu, C. C., Mutalik, V. K., and Arkin, A. P. (2012) Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals Nucleic Acids Res. 40, 5775-5786
    • (2012) Nucleic Acids Res. , vol.40 , pp. 5775-5786
    • Qi, L.1    Lucks, J.B.2    Liu, C.C.3    Mutalik, V.K.4    Arkin, A.P.5
  • 34
    • 33646183047 scopus 로고    scopus 로고
    • Artificial control of gene expression in mammalian cells by modulating RNA interference through aptamer-small molecule interaction
    • An, C. I., Trinh, V. B., and Yokobayashi, Y. (2006) Artificial control of gene expression in mammalian cells by modulating RNA interference through aptamer-small molecule interaction RNA 12, 710-716
    • (2006) RNA , vol.12 , pp. 710-716
    • An, C.I.1    Trinh, V.B.2    Yokobayashi, Y.3
  • 35
    • 0037388001 scopus 로고    scopus 로고
    • Conditional gene expression by controlling translation with tetracycline-binding aptamers
    • DOI 10.1093/nar/gkg285
    • Suess, B., Hanson, S., Berens, C., Fink, B., Schroeder, R., and Hillen, W. (2003) Conditional gene expression by controlling translation with tetracycline-binding aptamers Nucleic Acids Res. 31, 1853-1858 (Pubitemid 36432692)
    • (2003) Nucleic Acids Research , vol.31 , Issue.7 , pp. 1853-1858
    • Suess, B.1    Hanson, S.2    Berens, C.3    Fink, B.4    Schroeder, R.5    Hillen, W.6
  • 36
    • 33747164245 scopus 로고    scopus 로고
    • Aptamers come of age - At last
    • DOI 10.1038/nrmicro1458, PII NRMICRO1458
    • Bunka, D. H. and Stockley, P. G. (2006) Aptamers come of age - at last Nat. Rev. Microbiol. 4, 588-596 (Pubitemid 44317021)
    • (2006) Nature Reviews Microbiology , vol.4 , Issue.8 , pp. 588-596
    • Bunka, D.H.J.1    Stockley, P.G.2
  • 37
    • 84861401558 scopus 로고    scopus 로고
    • Direct and specific chemical control of eukaryotic translation with a synthetic RNA-protein interaction
    • Goldfless, S. J., Belmont, B. J., de Paz, A. M., Liu, J. F., and Niles, J. C. (2012) Direct and specific chemical control of eukaryotic translation with a synthetic RNA-protein interaction Nucleic Acids Res. 40, e64
    • (2012) Nucleic Acids Res. , vol.40 , pp. 64
    • Goldfless, S.J.1    Belmont, B.J.2    De Paz, A.M.3    Liu, J.F.4    Niles, J.C.5
  • 38
    • 84866559567 scopus 로고    scopus 로고
    • De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells
    • Rodrigo, G., Landrain, T. E., and Jaramillo, A. (2012) De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells Proc. Natl. Acad. Sci. U. S. A. 109, 15271-15276
    • (2012) Proc. Natl. Acad. Sci. U. S. A. , vol.109 , pp. 15271-15276
    • Rodrigo, G.1    Landrain, T.E.2    Jaramillo, A.3
  • 39
    • 0025194307 scopus 로고
    • Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase
    • Tuerk, C. and Gold, L. (1990) Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase Science 249, 505-510
    • (1990) Science , vol.249 , pp. 505-510
    • Tuerk, C.1    Gold, L.2
  • 40
    • 84858189341 scopus 로고    scopus 로고
    • Rational design and tuning of ribozyme-based devices
    • Liang, J. C. and Smolke, C. D. (2012) Rational design and tuning of ribozyme-based devices Methods Mol. Biol. 848, 439-454
    • (2012) Methods Mol. Biol. , vol.848 , pp. 439-454
    • Liang, J.C.1    Smolke, C.D.2
  • 41
    • 77952507419 scopus 로고    scopus 로고
    • Reprogramming bacteria to seek and destroy an herbicide
    • Sinha, J., Reyes, S. J., and Gallivan, J. P. (2010) Reprogramming bacteria to seek and destroy an herbicide Nat. Chem. Biol. 6, 464-470
    • (2010) Nat. Chem. Biol. , vol.6 , pp. 464-470
    • Sinha, J.1    Reyes, S.J.2    Gallivan, J.P.3
  • 42
    • 0023651444 scopus 로고
    • Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
    • Milligan, J. F., Groebe, D. R., Witherell, G. W., and Uhlenbeck, O. C. (1987) Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates Nucleic Acids Res. 15, 8783-8798
    • (1987) Nucleic Acids Res. , vol.15 , pp. 8783-8798
    • Milligan, J.F.1    Groebe, D.R.2    Witherell, G.W.3    Uhlenbeck, O.C.4
  • 43
    • 0032562751 scopus 로고    scopus 로고
    • Template strand switching by T7 RNA polymerase
    • DOI 10.1074/jbc.273.17.10253
    • Rong, M., Durbin, R. K., and McAllister, W. T. (1998) Template strand switching by T7 RNA polymerase J. Biol. Chem. 273, 10253-10260 (Pubitemid 28227628)
    • (1998) Journal of Biological Chemistry , vol.273 , Issue.17 , pp. 10253-10260
    • Rong, M.1    Durbin, R.K.2    McAllister, W.T.3
  • 44
    • 0028950659 scopus 로고
    • Structural and functional characterization of potent antithrombotic oligonucleotides possessing both quadruplex and duplex motifs
    • Macaya, R. F., Waldron, J. A., Beutel, B. A., Gao, H., Joesten, M. E., Yang, M., Patel, R., Bertelsen, A. H., and Cook, A. F. (1995) Structural and functional characterization of potent antithrombotic oligonucleotides possessing both quadruplex and duplex motifs Biochemistry 34, 4478-4492
    • (1995) Biochemistry , vol.34 , pp. 4478-4492
    • MacAya, R.F.1    Waldron, J.A.2    Beutel, B.A.3    Gao, H.4    Joesten, M.E.5    Yang, M.6    Patel, R.7    Bertelsen, A.H.8    Cook, A.F.9
  • 45
    • 10044277172 scopus 로고    scopus 로고
    • Aptasensor development: Elucidation of critical parameters for optimal aptamer performance
    • DOI 10.1021/ac049258o
    • Baldrich, E., Restrepo, A., and O'Sullivan, C. K. (2004) Aptasensor development: elucidation of critical parameters for optimal aptamer performance Anal. Chem. 76, 7053-7063 (Pubitemid 39600880)
    • (2004) Analytical Chemistry , vol.76 , Issue.23 , pp. 7053-7063
    • Baldrich, E.1    Restrepo, A.2    O'Sullivan, C.K.3
  • 46
    • 47749117138 scopus 로고    scopus 로고
    • Real-time PCR detection of protein analytes with conformation-switching aptamers
    • Yang, L. and Ellington, A. D. (2008) Real-time PCR detection of protein analytes with conformation-switching aptamers Anal. Biochem. 380, 164-173
    • (2008) Anal. Biochem. , vol.380 , pp. 164-173
    • Yang, L.1    Ellington, A.D.2
  • 47
    • 0035879386 scopus 로고    scopus 로고
    • Aptamer beacons for the direct detection of proteins
    • DOI 10.1006/abio.2001.5169
    • Hamaguchi, N., Ellington, A., and Stanton, M. (2001) Aptamer beacons for the direct detection of proteins Anal. Biochem. 294, 126-131 (Pubitemid 32641757)
    • (2001) Analytical Biochemistry , vol.294 , Issue.2 , pp. 126-131
    • Hamaguchi, N.1    Ellington, A.2    Stanton, M.3
  • 48
    • 84871566239 scopus 로고    scopus 로고
    • A logical molecular circuit for programmable and autonomous regulation of protein activity using DNA aptamer-protein interactions
    • Han, D., Zhu, Z., Wu, C., Peng, L., Zhou, L., Gulbakan, B., Zhu, G., Williams, K. R., and Tan, W. (2012) A logical molecular circuit for programmable and autonomous regulation of protein activity using DNA aptamer-protein interactions J. Am. Chem. Soc. 134, 20797-20804
    • (2012) J. Am. Chem. Soc. , vol.134 , pp. 20797-20804
    • Han, D.1    Zhu, Z.2    Wu, C.3    Peng, L.4    Zhou, L.5    Gulbakan, B.6    Zhu, G.7    Williams, K.R.8    Tan, W.9
  • 49
    • 4043094730 scopus 로고    scopus 로고
    • A DNA-based machine that can cyclically bind and release thrombin
    • DOI 10.1002/anie.200353537
    • Dittmer, W. U., Reuter, A., and Simmel, F. C. (2004) A DNA-based machine that can cyclically bind and release thrombin Angew. Chem., Int. Ed. Engl. 43, 3550-3553 (Pubitemid 39257533)
    • (2004) Angewandte Chemie - International Edition , vol.43 , Issue.27 , pp. 3550-3553
    • Dittmer, W.U.1    Reuter, A.2    Simmel, F.C.3
  • 50
    • 0024504801 scopus 로고
    • Affinity generation of single-stranded DNA for dideoxy sequencing following the polymerase chain reaction
    • DOI 10.1016/0003-2697(89)90631-3
    • Mitchell, L. G. and Merril, C. R. (1989) Affinity generation of single-stranded DNA for dideoxy sequencing following the polymerase chain reaction Anal. Biochem. 178, 239-242 (Pubitemid 19125340)
    • (1989) Analytical Biochemistry , vol.178 , Issue.2 , pp. 239-242
    • Mitchell, L.G.1    Merril, C.R.2
  • 51
    • 36448977956 scopus 로고    scopus 로고
    • Rolling circle enzymatic replication of a complex multi-crossover DNA nanostructure
    • DOI 10.1021/ja0760980
    • Lin, C. X., Wang, X., Liu, Y., Seeman, N. C., and Yan, H. (2007) Rolling circle enzymatic replication of a complex multi-crossover DNA nanostructure J. Am. Chem. Soc. 129, 14475-14481 (Pubitemid 350171476)
    • (2007) Journal of the American Chemical Society , vol.129 , Issue.46 , pp. 14475-14481
    • Lin, C.1    Wang, X.2    Liu, Y.3    Seeman, N.C.4    Yan, H.5
  • 52
    • 0028958905 scopus 로고
    • Initiation of RNA-primed DNA synthesis in vitro by DNA polymerase alpha-primase
    • Harrington, C. and Perrino, F. W. (1995) Initiation of RNA-primed DNA synthesis in vitro by DNA polymerase alpha-primase Nucleic Acids Res. 23, 1003-1009
    • (1995) Nucleic Acids Res. , vol.23 , pp. 1003-1009
    • Harrington, C.1    Perrino, F.W.2
  • 53
    • 0029160260 scopus 로고
    • T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation
    • Zhou, W., Reines, D., and Doetsch, P. W. (1995) T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation Cell 82, 577-585
    • (1995) Cell , vol.82 , pp. 577-585
    • Zhou, W.1    Reines, D.2    Doetsch, P.W.3
  • 54
    • 45149134017 scopus 로고    scopus 로고
    • G4-forming sequences in the non-transcribed DNA strand pose blocks to T7 RNA polymerase and mammalian RNA polymerase II
    • Tornaletti, S., Park-Snyder, S., and Hanawalt, P. C. (2008) G4-forming sequences in the non-transcribed DNA strand pose blocks to T7 RNA polymerase and mammalian RNA polymerase II J. Biol. Chem. 283, 12756-12762
    • (2008) J. Biol. Chem. , vol.283 , pp. 12756-12762
    • Tornaletti, S.1    Park-Snyder, S.2    Hanawalt, P.C.3
  • 56
    • 79955864551 scopus 로고    scopus 로고
    • Transcription arrest by a G quadruplex forming-trinucleotide repeat sequence from the human c-myb gene
    • Broxson, C., Beckett, J., and Tornaletti, S. (2011) Transcription arrest by a G quadruplex forming-trinucleotide repeat sequence from the human c-myb gene Biochemistry 50, 4162-4172
    • (2011) Biochemistry , vol.50 , pp. 4162-4172
    • Broxson, C.1    Beckett, J.2    Tornaletti, S.3
  • 58
    • 0030458354 scopus 로고    scopus 로고
    • T7 RNA polymerase cannot transcribe through a highly knotted DNA template
    • DOI 10.1093/nar/24.24.4890
    • Portugalmpm, J. and Rodriguez-Campos, A. (1996) T7 RNA polymerase cannot transcribe through a highly knotted DNA template Nucleic Acids Res. 24, 4890-4894 (Pubitemid 27007892)
    • (1996) Nucleic Acids Research , vol.24 , Issue.24 , pp. 4890-4894
    • Portugal, J.1    Rodriguez-Campos, A.2
  • 59
    • 0014793184 scopus 로고
    • Function of gene 32-protein, a new protein essential for the genetic recombination and replication of T4 bacteriophage DNA
    • Alberts, B. M. (1970) Function of gene 32-protein, a new protein essential for the genetic recombination and replication of T4 bacteriophage DNA Fed. Proc. 29, 1154-1163
    • (1970) Fed. Proc. , vol.29 , pp. 1154-1163
    • Alberts, B.M.1
  • 61
    • 0028318093 scopus 로고
    • Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)
    • DOI 10.1006/jmbi.1994.1105
    • Schultze, P., Macaya, R. F., and Feigon, J. (1994) Three-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG) J. Mol. Biol. 235, 1532-1547 (Pubitemid 24150403)
    • (1994) Journal of Molecular Biology , vol.235 , Issue.5 , pp. 1532-1547
    • Schultze, P.1    Macaya, R.F.2    Feigon, J.3
  • 62
    • 70350674190 scopus 로고    scopus 로고
    • Direct visualization of G-quadruplexes in DNA using atomic force microscopy
    • Neaves, K. J., Huppert, J. L., Henderson, R. M., and Edwardson, J. M. (2009) Direct visualization of G-quadruplexes in DNA using atomic force microscopy Nucleic Acids Res. 37, 6269-6275
    • (2009) Nucleic Acids Res. , vol.37 , pp. 6269-6275
    • Neaves, K.J.1    Huppert, J.L.2    Henderson, R.M.3    Edwardson, J.M.4
  • 63
    • 0025953981 scopus 로고
    • The influence of an alternate template conformation on elongating phage T7 RNA polymerase
    • Droge, P. and Pohl, F. M. (1991) The influence of an alternate template conformation on elongating phage T7 RNA polymerase Nucleic Acids Res. 19, 5301-5306 (Pubitemid 21912926)
    • (1991) Nucleic Acids Research , vol.19 , Issue.19 , pp. 5301-5306
    • Droge, P.1    Pohl, F.M.2
  • 64
    • 84864953230 scopus 로고    scopus 로고
    • Cell-free protein synthesis: Applications come of age
    • Carlson, E. D., Gan, R., Hodgman, C. E., and Jewett, M. C. (2012) Cell-free protein synthesis: Applications come of age Biotechnol. Adv. 30, 1185-1194
    • (2012) Biotechnol. Adv. , vol.30 , pp. 1185-1194
    • Carlson, E.D.1    Gan, R.2    Hodgman, C.E.3    Jewett, M.C.4
  • 65
    • 79956158054 scopus 로고    scopus 로고
    • Microscale to manufacturing scale-up of cell-free cytokine production - A new approach for shortening protein production development timelines
    • Zawada, J. F., Yin, G., Steiner, A. R., Yang, J., Naresh, A., Roy, S. M., Gold, D. S., Heinsohn, H. G., and Murray, C. J. (2011) Microscale to manufacturing scale-up of cell-free cytokine production - a new approach for shortening protein production development timelines Biotechnol. Bioeng. 108, 1570-1578
    • (2011) Biotechnol. Bioeng. , vol.108 , pp. 1570-1578
    • Zawada, J.F.1    Yin, G.2    Steiner, A.R.3    Yang, J.4    Naresh, A.5    Roy, S.M.6    Gold, D.S.7    Heinsohn, H.G.8    Murray, C.J.9
  • 66
    • 1542720448 scopus 로고    scopus 로고
    • Mimicking the Escherichia coli Cytoplasmic Environment Activates Long-Lived and Efficient Cell-Free Protein Synthesis
    • DOI 10.1002/bit.20026
    • Jewett, M. C. and Swartz, J. R. (2004) Mimicking the Escherichia coli cytoplasmic environment activates long-lived and efficient cell-free protein synthesis Biotechnol. Bioeng. 86, 19-26 (Pubitemid 38339387)
    • (2004) Biotechnology and Bioengineering , vol.86 , Issue.1 , pp. 19-26
    • Jewett, M.C.1    Swartz, J.R.2
  • 67
    • 77957345108 scopus 로고    scopus 로고
    • Update on designing and building minimal cells
    • Jewett, M. C. and Forster, A. C. (2010) Update on designing and building minimal cells Curr. Opin. Biotechnol. 21, 697-703
    • (2010) Curr. Opin. Biotechnol. , vol.21 , pp. 697-703
    • Jewett, M.C.1    Forster, A.C.2
  • 68
    • 14144254396 scopus 로고    scopus 로고
    • Creating small-molecule-dependent switches to modulate biological functions
    • DOI 10.1016/j.chembiol.2004.11.012
    • Buskirk, A. R. and Liu, D. R. (2005) Creating small-molecule-dependent switches to modulate biological functions Chem. Biol. 12, 151-161 (Pubitemid 40281323)
    • (2005) Chemistry and Biology , vol.12 , Issue.2 , pp. 151-161
    • Buskirk, A.R.1    Liu, D.R.2
  • 69
    • 84866953925 scopus 로고    scopus 로고
    • Modular control of multiple pathways using engineered orthogonal T7 polymerases
    • Temme, K., Hill, R., Segall-Shapiro, T. H., Moser, F., and Voigt, C. A. (2012) Modular control of multiple pathways using engineered orthogonal T7 polymerases Nucleic Acids Res. 40, 8773-8781
    • (2012) Nucleic Acids Res. , vol.40 , pp. 8773-8781
    • Temme, K.1    Hill, R.2    Segall-Shapiro, T.H.3    Moser, F.4    Voigt, C.A.5
  • 70
    • 65849117022 scopus 로고    scopus 로고
    • Selection of aptamers for a protein target in cell lysate and their application to protein purification
    • Javaherian, S., Musheev, M. U., Kanoatov, M., Berezovski, M. V., and Krylov, S. N. (2009) Selection of aptamers for a protein target in cell lysate and their application to protein purification Nucleic Acids Res. 37, e62
    • (2009) Nucleic Acids Res. , vol.37 , pp. 62
    • Javaherian, S.1    Musheev, M.U.2    Kanoatov, M.3    Berezovski, M.V.4    Krylov, S.N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.