-
2
-
-
84878524128
-
Response to the AIDS pandemic - A global health model
-
Piot P, Quinn TC (2013) Response to the AIDS pandemic - a global health model. N Engl J Med 368:2210-2218
-
(2013)
N Engl J Med
, vol.368
, pp. 2210-2218
-
-
Piot, P.1
Quinn, T.C.2
-
3
-
-
79951968104
-
A 40-year journey in search of selective antiviral chemotherapy
-
De Clercq EA (2011) A 40-year journey in search of selective antiviral chemotherapy. Annu Rev Pharmacol Toxicol 51:1-27
-
(2011)
Annu Rev Pharmacol Toxicol
, vol.51
, pp. 1-27
-
-
De Clercq, E.A.1
-
4
-
-
47749091287
-
Mortality and morbidity of HIV infected patients receiving HAART: A cohort study
-
DOI 10.2174/157016208784324976
-
Panos G, Samonis G, Alexiou VG, Kavarnou GA, Charatsis G, Falagas ME (2008) Mortality and morbidity of HIV infected patients receiving HAART: a cohort study. Curr HIV Res 6:257-260 (Pubitemid 352024678)
-
(2008)
Current HIV Research
, vol.6
, Issue.3
, pp. 257-260
-
-
Panos, G.1
Samonis, G.2
Alexiou, V.G.3
Kavarnou, G.A.4
Charatsis, G.5
Falagas, M.E.6
-
5
-
-
73549115378
-
Non-nucleoside reverse transcriptase inhibitors (NNRTIs), their discovery, development, and use in the treatment of HIV-1 infection: A review of the last 20 years (1989-2009)
-
de Bethune M-P (2010) Non-nucleoside reverse transcriptase inhibitors (NNRTIs), their discovery, development, and use in the treatment of HIV-1 infection: a review of the last 20 years (1989-2009). Antivir Res 85:75-90
-
(2010)
Antivir Res
, vol.85
, pp. 75-90
-
-
De Bethune, M.-P.1
-
6
-
-
0036629840
-
NNRTI plus PI combinations in the perspective of nucleoside-sparing or nucleoside-failing antiretroviral regimens
-
Joly V, Descamps D, Yeni P (2002) NNRTI plus PI combinations in the perspective of nucleoside-sparing or nucleoside-failing antiretroviral regimens. AIDS Rev 4:128-139 (Pubitemid 35251990)
-
(2002)
AIDS Reviews
, vol.4
, Issue.3
, pp. 128-139
-
-
Joly, V.1
Descamps, D.2
Yeni, P.3
-
7
-
-
84868307748
-
Biochemical mechanism of HIV-1 resistance to rilpivirine
-
Singh K, Marchand B, Rai DK, Sharma B, Michailidis E, Ryan EM, Matzek KB, Leslie MD, Hagedorn AN, Li Z, Norden PR, Hachiya A, Parniak MA, Xu H-T, Wainberg MA, Sarafianos SG (2012) Biochemical mechanism of HIV-1 resistance to rilpivirine. J Biol Chem 287:38110-38123
-
(2012)
J Biol Chem
, vol.287
, pp. 38110-38123
-
-
Singh, K.1
Marchand, B.2
Rai, D.K.3
Sharma, B.4
Michailidis, E.5
Ryan, E.M.6
Matzek, K.B.7
Leslie, M.D.8
Hagedorn, A.N.9
Li, Z.10
Norden, P.R.11
Hachiya, A.12
Parniak, M.A.13
Xu, H.-T.14
Wainberg, M.A.15
Sarafianos, S.G.16
-
8
-
-
84904856365
-
-
Accessed 26 January 2014
-
FDA. Safety. Intelence (Etravirine). http://www.fda.gov/Safety/MedWatch/ SafetyInformation/SafetyAlertsforHumanMedicalProducts/ucm180579.htm. Accessed 26 January 2014
-
Safety. Intelence (Etravirine)
-
-
-
11
-
-
79953745195
-
Low-frequency HIV-1 drug resistance mutations and risk of NNRTI-based antiretroviral treatment failure: A systematic review and pooled analysis
-
Li JZ, Paredes R, Ribaudo HJ, Svarovskaia ES, Metzner KJ, Kozal MJ, Hullsiek KH, Balduin M, Jakobsen MR, Geretti AM, Thiebaut R, Ostergaard L, Masquelier B, Johnson JA, Miller MD, Kuritzkes DR (2012) Low-frequency HIV-1 drug resistance mutations and risk of NNRTI-based antiretroviral treatment failure: a systematic review and pooled analysis. JAMA 305:1327-1335
-
(2012)
JAMA
, vol.305
, pp. 1327-1335
-
-
Li, J.Z.1
Paredes, R.2
Ribaudo, H.J.3
Svarovskaia, E.S.4
Metzner, K.J.5
Kozal, M.J.6
Hullsiek, K.H.7
Balduin, M.8
Jakobsen, M.R.9
Geretti, A.M.10
Thiebaut, R.11
Ostergaard, L.12
Masquelier, B.13
Johnson, J.A.14
Miller, M.D.15
Kuritzkes, D.R.16
-
12
-
-
84860289205
-
Strategies for the design of HIV-1 non-nucleoside reverse transcriptase inhibitors: Lessons from the development of seven representative paradigms
-
Li D, Zhan P, De Clercq E, Liu X (2012) Strategies for the design of HIV-1 non-nucleoside reverse transcriptase inhibitors: lessons from the development of seven representative paradigms. J Med Chem 55:3595-3613
-
(2012)
J Med Chem
, vol.55
, pp. 3595-3613
-
-
Li, D.1
Zhan, P.2
De Clercq, E.3
Liu, X.4
-
13
-
-
84856711380
-
HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism
-
Das K, Martinez SE, Bauman JD, Arnold E (2012) HIV-1 reverse transcriptase complex with DNA and nevirapine reveals non-nucleoside inhibition mechanism. Nat Struct Mol Biol 19:253-259
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 253-259
-
-
Das, K.1
Martinez, S.E.2
Bauman, J.D.3
Arnold, E.4
-
14
-
-
84864712248
-
Thumbs down for HIV: Domain level rearrangements do occur in the NNRTI-bound HIV-1 reverse transcriptase
-
Wright DW, Kashif Sadiq S, De Fabritiis G, Coveney PV (2012) Thumbs down for HIV: domain level rearrangements do occur in the NNRTI-bound HIV-1 reverse transcriptase. J Am Chem Soc 134:12885-12888
-
(2012)
J Am Chem Soc
, vol.134
, pp. 12885-12888
-
-
Wright, D.W.1
Kashif Sadiq, S.2
De Fabritiis, G.3
Coveney, P.V.4
-
15
-
-
84875446054
-
Snapshot of the equilibrium dynamics of a drug bound to human immunodeficiency virus 1 reverse transcriptase
-
Kuroda DG, Bauman JD, Challa JR, Patel D, Troxler T, Das K, Arnold E, Hochstrasser RM (2013) Snapshot of the equilibrium dynamics of a drug bound to human immunodeficiency virus 1 reverse transcriptase. Nat Chem 5:174-181
-
(2013)
Nat Chem
, vol.5
, pp. 174-181
-
-
Kuroda, D.G.1
Bauman, J.D.2
Challa, J.R.3
Patel, D.4
Troxler, T.5
Das, K.6
Arnold, E.7
Hochstrasser, R.M.8
-
16
-
-
84868307748
-
Biochemical mechanism of HIV-1 resistance to rilpivirine
-
Singh K, Marchand B, Rai DK, Sharma B, Michailidis E, Ryan EM, Matzek KB, Leslie MD, Hagedorn AN, Li Z, Norden PR, Hachiya A, Parniak MA, Xu H-T, Wainberg MA, Sarafianos SG (2012) Biochemical mechanism of HIV-1 resistance to rilpivirine. J Biol Chem 287:38110-38223
-
(2012)
J Biol Chem
, vol.287
, pp. 38110-38223
-
-
Singh, K.1
Marchand, B.2
Rai, D.K.3
Sharma, B.4
Michailidis, E.5
Ryan, E.M.6
Matzek, K.B.7
Leslie, M.D.8
Hagedorn, A.N.9
Li, Z.10
Norden, P.R.11
Hachiya, A.12
Parniak, M.A.13
Xu, H.-T.14
Wainberg, M.A.15
Sarafianos, S.G.16
-
17
-
-
38749116964
-
Energetic effects for observed and unobserved HIV-1 reverse transcriptase mutations of residues L100, V106, and Y181 in the presence of nevirapine and efavirenz
-
DOI 10.1016/j.bmcl.2007.12.033, PII S0960894X07014898
-
Kroeger SMB, Rader LH, Franklin AM, Taylor EV, Smith KD, Smith RH Jr, Tirado-Rives J, Jorgensen WL (2008) Energetic effects for observed and unobserved HIV-1 reverse transcriptase mutations of residues L100, V106, and Y181 in the presence of nevirapine and efavirenz. Bioorg Med Chem Lett 18:969-972 (Pubitemid 351179354)
-
(2008)
Bioorganic and Medicinal Chemistry Letters
, vol.18
, Issue.3
, pp. 969-972
-
-
Kroeger, S.M.B.1
Rader, L.H.2
Franklin, A.M.3
Taylor, E.V.4
Smith, K.D.5
Smith Jr., R.H.6
Tirado-Rives, J.7
Jorgensen, W.L.8
-
18
-
-
1842779905
-
Structural and Energetic Analyses of the Effects of the K103N Mutation of HIV-1 Reverse Transcriptase on Efavirenz Analogues
-
DOI 10.1021/jm0303507
-
Udier-Blagovic M, Tirado-Rives J, Jorgensen WL (2004) Structural and energetic analyses of the effects of the K103N mutation of HIV-1 reverse transcriptase on efavirenz analogues. J Med Chem 47:2389-2392 (Pubitemid 38478862)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.9
, pp. 2389-2392
-
-
Udier-Blagovic, M.1
Tirado-Rives, J.2
Jorgensen, W.L.3
-
19
-
-
84861868033
-
Energetics of mutation-induced changes in potency of lersivirine against HIV-1 reverse transcriptase
-
Kar P, Knecht V (2012) Energetics of mutation-induced changes in potency of lersivirine against HIV-1 reverse transcriptase. J Phys Chem B 116:6269-6278
-
(2012)
J Phys Chem B
, vol.116
, pp. 6269-6278
-
-
Kar, P.1
Knecht, V.2
-
20
-
-
80054956003
-
Systematic investigation on the binding of GW420867X as HIV-1 reverse transcriptase inhibitor
-
and references cited therein
-
Saparpakorn P, Wolschann P, Karpfen A, Pungpo P, Hannongbua S (2011) Systematic investigation on the binding of GW420867X as HIV-1 reverse transcriptase inhibitor. Monatsh Chem 142:961-971, and references cited therein
-
(2011)
Monatsh Chem
, vol.142
, pp. 961-971
-
-
Saparpakorn, P.1
Wolschann, P.2
Karpfen, A.3
Pungpo, P.4
Hannongbua, S.5
-
21
-
-
26444446031
-
Quantum computational analysis for drug resistance of HIV-1 reverse transcriptase to nevirapine through point mutations
-
DOI 10.1002/prot.20578
-
He X, Mei Y, Xiang Y, Zhang DW, Zhang JZH (2005) Quantum computational analysis for drug resistance of HIV-1 reverse transcriptase to nevirapine through point mutations. Proteins 61:423-432 (Pubitemid 41430485)
-
(2005)
Proteins: Structure, Function and Genetics
, vol.61
, Issue.2
, pp. 423-432
-
-
He, X.1
Mei, Y.2
Xiang, Y.3
Zhang, D.W.4
Zhang, J.Z.H.5
-
22
-
-
77953944390
-
Modelling the binding of HIV-reverse transcriptase and nevirapine: An assessment of quantum mechanical and force field approaches and predictions of the effect of mutations on binding
-
Raju RK, Burton NA, Hillier IH (2010) Modelling the binding of HIV-reverse transcriptase and nevirapine: an assessment of quantum mechanical and force field approaches and predictions of the effect of mutations on binding. Phys Chem Chem Phys 12:7117-7125
-
(2010)
Phys Chem Chem Phys
, vol.12
, pp. 7117-7125
-
-
Raju, R.K.1
Burton, N.A.2
Hillier, I.H.3
-
23
-
-
33646188488
-
Effect of C-H⋯S and C-H⋯Cl interactions on the conformational preference of inhibitors of TIBO family
-
Freitas RF, Galembeck SE (2006) Effect of C-H⋯S and C-H⋯Cl interactions on the conformational preference of inhibitors of TIBO family. Chem Phys Lett 423:131-137
-
(2006)
Chem Phys Lett
, vol.423
, pp. 131-137
-
-
Freitas, R.F.1
Galembeck, S.E.2
-
24
-
-
33751297871
-
Computational study of the interaction between TIBO inhibitors and Y181 (C181), K101, and Y188 amino acids
-
DOI 10.1021/jp063058u
-
Freitas RF, Galembeck SE (2006) Computational study of the interaction between TIBO inhibitors and Y181 (C181), K101, and Y188 amino acids. J Phys Chem B 110:21287-21298 (Pubitemid 44797404)
-
(2006)
Journal of Physical Chemistry B
, vol.110
, Issue.42
, pp. 21287-21298
-
-
Freitas, R.F.1
Galembeck, S.E.2
-
25
-
-
84868683149
-
Synthesis, biological evaluation and molecular modeling of 4,6-diarylpyrimidines and diarylbenzenes as novel non-nucleosides HIV-1 reverse transcriptase inhibitors
-
Ribone SR, Leen V, Madrid M, Dehaen W, Daelemans D, Pannecouque C, Briñón MC (2012) Synthesis, biological evaluation and molecular modeling of 4,6-diarylpyrimidines and diarylbenzenes as novel non-nucleosides HIV-1 reverse transcriptase inhibitors. Eur J Med Chem 58:485-492
-
(2012)
Eur J Med Chem
, vol.58
, pp. 485-492
-
-
Ribone, S.R.1
Leen, V.2
Madrid, M.3
Dehaen, W.4
Daelemans, D.5
Pannecouque, C.6
Briñón, M.C.7
-
26
-
-
34248998744
-
Relationship of potency and resilience to drug resistant mutations for GW420867X revealed by crystal structures of inhibitor complexes for wild-type, Leu100Ile, Lys101Glu, and Tyr188Cys mutant HIV-1 reverse transcriptases
-
DOI 10.1021/jm061117m
-
Ren J, Nichols CE, Stamp A, Chamberlain PP, Weaver KL, Short SA, Chan JH, Kleim J-PK, Stammers DK (2007) Relationship of potency and resilience to drug resistant mutations for GW420867X revealed by crystal structures of inhibitor complexes for wild-type, Leu100Ile, Lys101Glu, and Tyr188Cys mutant HIV-1 reverse transcriptases. J Med Chem 50:2301-2309 (Pubitemid 46799242)
-
(2007)
Journal of Medicinal Chemistry
, vol.50
, Issue.10
, pp. 2301-2309
-
-
Ren, J.1
Nichols, C.E.2
Chamberlain, P.P.3
Weaver, K.L.4
Short, S.A.5
Chan, J.H.6
Kleim, J.-P.7
Stammers, D.K.8
-
28
-
-
0033963034
-
Molden: A pre- and post-processing program for molecular and electronic structures
-
DOI 10.1023/A:1008193805436
-
Schaftenaar G, Noordik JH (2000) Molden: a pre- and post-processing program for molecular and electronic structures. J Comput Aided Mol Des 14:123-134 (Pubitemid 30110670)
-
(2000)
Journal of Computer-Aided Molecular Design
, vol.14
, Issue.2
, pp. 123-134
-
-
Schaftenaar, G.1
Noordik, J.H.2
-
29
-
-
0344718335
-
Density-functional thermochemistry. V. Systematic optimization of exchange-correlation functionals
-
Becke AD (1997) Density-functional thermochemistry. V. Systematic optimization of exchange-correlation functionals. J Chem Phys 107:8554-8560
-
(1997)
J Chem Phys
, vol.107
, pp. 8554-8560
-
-
Becke, A.D.1
-
30
-
-
33750559983
-
Semiempirical GGA-type density functional constructed with a long-range dispersion correction
-
Grimme S (2006) Semiempirical GGA-type density functional constructed with a long-range dispersion correction. J Comput Chem 27:1787-1799
-
(2006)
J Comput Chem
, vol.27
, pp. 1787-1799
-
-
Grimme, S.1
-
32
-
-
43049141516
-
The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: Two new functionals and systematic testing of four M06-class functionals and 12 other functionals
-
Zhao Y, Truhlar DG (2008) The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals. Theor Chem Accounts 120:215-241
-
(2008)
Theor Chem Accounts
, vol.120
, pp. 215-241
-
-
Zhao, Y.1
Truhlar, D.G.2
-
33
-
-
33746614482
-
Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen
-
Dunning TH Jr (1989) Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen. J Chem Phys 90:1007-1023
-
(1989)
J Chem Phys
, vol.90
, pp. 1007-1023
-
-
Dunning Jr., T.H.1
-
34
-
-
34250306276
-
Optimized spin-component scaled second-order Møller-Plesset perturbation theory for intermolecular interaction energies
-
Distasio RA Jr, Head-Gordon M (2007) Optimized spin-component scaled second-order Møller-Plesset perturbation theory for intermolecular interaction energies. Mol Phys 105:1073-1083
-
(2007)
Mol Phys
, vol.105
, pp. 1073-1083
-
-
Distasio Jr., R.A.1
Head-Gordon, M.2
-
35
-
-
84890021933
-
The calculations of small molecular interactions by the diferences of separate total energies. Some procedures with reduced errors
-
Boys SF, Bernardi F (1970) The calculations of small molecular interactions by the diferences of separate total energies. Some procedures with reduced errors. Mol Phys 19:553-566
-
(1970)
Mol Phys
, vol.19
, pp. 553-566
-
-
Boys, S.F.1
Bernardi, F.2
-
36
-
-
75749083809
-
-
Gaussian, Inc., Wallingford CT
-
Gaussian 09, Revision A.02, Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Mennucci B, Petersson GA, Nakatsuji H, Caricato M, Li X, Hratchian HP, Izmaylov AF, Bloino J, Zheng G, Sonnenberg JL, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery JA Jr, Peralta JE, Ogliaro F, Bearpark M, Heyd JJ, Brothers E, Kudin KN, Staroverov VN, Kobayashi R, Normand J, Raghavachari K, Rendell A, Burant JC, Iyengar SS, Tomasi J, Cossi M, Rega N, Millam JM, Klene M, Knox JE, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski J. W, Martin R. L, Morokuma K, Zakrzewski VG, Voth GA, Salvador P, Dannenberg JJ, Dapprich S, Daniels AD, Farkas O, Foresman J. B, Ortiz JV, Cioslowski J, Fox DJ (2009) Gaussian, Inc., Wallingford CT
-
(2009)
Gaussian 09, Revision A.02
-
-
Frisch, M.J.1
Trucks, G.W.2
Schlegel, H.B.3
Scuseria, G.E.4
Robb, M.A.5
Cheeseman, J.R.6
Scalmani, G.7
Barone, V.8
Mennucci, B.9
Petersson, G.A.10
Nakatsuji, H.11
Caricato, M.12
Li, X.13
Hratchian, H.P.14
Izmaylov, A.F.15
Bloino, J.16
Zheng, G.17
Sonnenberg, J.L.18
Hada, M.19
Ehara, M.20
Toyota, K.21
Fukuda, R.22
Hasegawa, J.23
Ishida, M.24
Nakajima, T.25
Honda, Y.26
Kitao, O.27
Nakai, H.28
Vreven, T.29
Montgomery Jr., J.A.30
Peralta, J.E.31
Ogliaro, F.32
Bearpark, M.33
Heyd, J.J.34
Brothers, E.35
Kudin, K.N.36
Staroverov, V.N.37
Kobayashi, R.38
Normand, J.39
Raghavachari, K.40
Rendell, A.41
Burant, J.C.42
Iyengar, S.S.43
Tomasi, J.44
Cossi, M.45
Rega, N.46
Millam, J.M.47
Klene, M.48
Knox, J.E.49
Cross, J.B.50
Bakken, V.51
Adamo, C.52
Jaramillo, J.53
Gomperts, R.54
Stratmann, R.E.55
Yazyev, O.56
Austin, A.J.57
Cammi, R.58
Pomelli, C.59
Ochterski, J.W.60
Martin, R.L.61
Morokuma, K.62
Zakrzewski, V.G.63
Voth, G.A.64
Salvador, P.65
Dannenberg, J.J.66
Dapprich, S.67
Daniels, A.D.68
Farkas, O.69
Foresman, J.B.70
Ortiz, J.V.71
Cioslowski, J.72
Fox, D.J.73
more..
-
37
-
-
4243539377
-
Electronic structure calculations on workstation computers: The program system Turbomole
-
Ahlrichs R, Bär M, Häser M, Horn H, Kölmel C (1989) Electronic structure calculations on workstation computers: the program system Turbomole. Chem Phys Lett 162:165-169
-
(1989)
Chem Phys Lett
, vol.162
, pp. 165-169
-
-
Ahlrichs, R.1
Bär, M.2
Häser, M.3
Horn, H.4
Kölmel, C.5
-
38
-
-
0003915529
-
-
Theoretical Chemistry Institute, University of Wisconsin, Madison
-
Glendening ED, Badenhoop JK, Reed AE, Carpenter JE, Bohmann JA, Morales CM, Weinhold F (2001) NBO 5.0. Theoretical Chemistry Institute, University of Wisconsin, Madison
-
(2001)
NBO 5.0
-
-
Glendening, E.D.1
Badenhoop, J.K.2
Reed, A.E.3
Carpenter, J.E.4
Bohmann, J.A.5
Morales, C.M.6
Weinhold, F.7
-
40
-
-
77952032315
-
Revealing noncovalent interactions
-
Johnson ER, Keinan S, Mori-Sanchez P, Contreras-Garcia J, Cohen AJ, Yang W (2010) Revealing noncovalent interactions. J Am Chem Soc 132:6498-6506
-
(2010)
J Am Chem Soc
, vol.132
, pp. 6498-6506
-
-
Johnson, E.R.1
Keinan, S.2
Mori-Sanchez, P.3
Contreras-Garcia, J.4
Cohen, A.J.5
Yang, W.6
-
43
-
-
75649097129
-
Aten-an application for the creation, editing, and visualization of coordinates for glasses, liquids, crystals, and molecules
-
Youngs TGA (2010) Aten-an application for the creation, editing, and visualization of coordinates for glasses, liquids, crystals, and molecules. J Comput Chem 31:639-648
-
(2010)
J Comput Chem
, vol.31
, pp. 639-648
-
-
Youngs, T.G.A.1
-
44
-
-
34250855167
-
Basis set exchange: A community database for computational sciences
-
DOI 10.1021/ci600510j
-
Schuchardt KL, Didier BT, Elsethagen T, Sun L, Gurumoorthi V, Chase J, Li J, Windus TL (2007) Basis set exchange: a community database for computational sciences. J Chem Inf Model 47:1045-1052 (Pubitemid 46973720)
-
(2007)
Journal of Chemical Information and Modeling
, vol.47
, Issue.3
, pp. 1045-1052
-
-
Schuchardt, K.L.1
Didier, B.T.2
Elsethagen, T.3
Sun, L.4
Gurumoorthi, V.5
Chase, J.6
Li, J.7
Windus, T.L.8
-
45
-
-
20644438873
-
Chemistry with ADF
-
DOI 10.1002/jcc.1056
-
te Velde G, Bickelhaupt FM, Baerends EJ, Fonseca Guerra C, van Gisbergen SJA, Snijders JG, Ziegler T (2001) Chemistry with ADF. J Comput Chem 22:931-967, See also http://www.scm.com (Pubitemid 32455733)
-
(2001)
Journal of Computational Chemistry
, vol.22
, Issue.9
, pp. 931-967
-
-
Bickelhaupt, F.M.1
-
46
-
-
77951680464
-
A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu
-
Grimme S, Anthony J, Ehrlich S, Krieg H (2010) A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu. J Chem Phys 132:154104
-
(2010)
J Chem Phys
, vol.132
, pp. 154104
-
-
Grimme, S.1
Anthony, J.2
Ehrlich, S.3
Krieg, H.4
-
47
-
-
70349928949
-
A ditopic ion-pair receptor based on stacked nucleobase quartets
-
van der Wijst T, Fonseca Guerra C, Swart M, Bickelhaupt FM, Lippert B (2009) A ditopic ion-pair receptor based on stacked nucleobase quartets. Angew Chem Int Ed 48:3285-3287
-
(2009)
Angew Chem Int Ed
, vol.48
, pp. 3285-3287
-
-
Van Der Wijst, T.1
Fonseca Guerra, C.2
Swart, M.3
Bickelhaupt, F.M.4
Lippert, B.5
-
48
-
-
77949272775
-
Adenine versus guanine quartets in aqueous solution: Dispersion-corrected DFT study on the differences in p-stacking and hydrogen-bonding behavior
-
Fonseca Guerra C, van der Wijst T, Swart M, Poater J, Bickelhaupt FM (2010) Adenine versus guanine quartets in aqueous solution: dispersion-corrected DFT study on the differences in p-stacking and hydrogen-bonding behavior. Theor Chem Accounts 125:245-252
-
(2010)
Theor Chem Accounts
, vol.125
, pp. 245-252
-
-
Fonseca Guerra, C.1
Van Der Wijst, T.2
Swart, M.3
Poater, J.4
Bickelhaupt, F.M.5
-
49
-
-
0034373424
-
Kohn-Sham density functional theory: Predicting and understanding chemistry
-
Lipkowitz KB, Boyd DB (eds) Wiley-VCH, New York
-
Bickelhaupt FM, Baerends EJ (2000) Kohn-Sham density functional theory: predicting and understanding chemistry. In: Lipkowitz KB, Boyd DB (eds) Reviews in computational chemistry vol 15. Wiley-VCH, New York, pp 1-86
-
(2000)
Reviews in Computational Chemistry
, vol.15
, pp. 1-86
-
-
Bickelhaupt, F.M.1
Baerends, E.J.2
-
51
-
-
77958499632
-
Microhydration of the guanine-guanine and guanine-cytosine base pairs
-
Urashima S, Asami H, Ohba M, Saigusa H (2010) Microhydration of the guanine-guanine and guanine-cytosine base pairs. J Phys Chem A 114:11231-11237
-
(2010)
J Phys Chem A
, vol.114
, pp. 11231-11237
-
-
Urashima, S.1
Asami, H.2
Ohba, M.3
Saigusa, H.4
-
52
-
-
70350739141
-
Estimation of individual binding energies in some dimers involving multiple hydrogen bonds using topological properties of electron charge density
-
Ebrahimi A, Habibi Khorassani SM, Delarami H (2009) Estimation of individual binding energies in some dimers involving multiple hydrogen bonds using topological properties of electron charge density. Chem Phys 365:18-23
-
(2009)
Chem Phys
, vol.365
, pp. 18-23
-
-
Ebrahimi, A.1
Habibi Khorassani, S.M.2
Delarami, H.3
-
53
-
-
27744546066
-
2+)
-
DOI 10.1080/00268920512331316238
-
Poater J, Sodupe M, Bertran J, Sola M (2005) Hydrogen bonding and aromaticity in the guanine-cytosine base pair interacting with metal cations (M=Cu+, Ca2+ and Cu2+). Mol Phys 103:163-173 (Pubitemid 41632941)
-
(2005)
Molecular Physics
, vol.103
, Issue.2-3
, pp. 163-173
-
-
Poater, J.1
Sodupe, M.2
Bertran, J.3
Sola, M.4
-
55
-
-
84859917592
-
Calculations on noncovalent interactions and databases of benchmark interaction energies
-
Hobza P (2012) Calculations on noncovalent interactions and databases of benchmark interaction energies. Acc Chem Res 45:663-672
-
(2012)
Acc Chem Res
, vol.45
, pp. 663-672
-
-
Hobza, P.1
-
56
-
-
84858786915
-
Wavefunction methods for noncovalent interactions
-
Hohenstein EG, Sherrill CD (2012) Wavefunction methods for noncovalent interactions. WIREs Comput Mol Sci 2:304-326
-
(2012)
WIREs Comput Mol Sci
, vol.2
, pp. 304-326
-
-
Hohenstein, E.G.1
Sherrill, C.D.2
-
57
-
-
77955003137
-
Stabilization and structure calculations for noncovalent interactions in extended molecular systems based on wave function and density functional theories
-
Riley KE, Pitonak M, Jurecka P, Hobza P (2010) Stabilization and structure calculations for noncovalent interactions in extended molecular systems based on wave function and density functional theories. Chem Rev 110:5023-5063
-
(2010)
Chem Rev
, vol.110
, pp. 5023-5063
-
-
Riley, K.E.1
Pitonak, M.2
Jurecka, P.3
Hobza, P.4
-
58
-
-
84875979464
-
Halogen bonds: Benchmarks and theoretical analysis
-
Kozuch S, Martin JML (2013) Halogen bonds: benchmarks and theoretical analysis. J Chem Theory Comput 9:1918-1931
-
(2013)
J Chem Theory Comput
, vol.9
, pp. 1918-1931
-
-
Kozuch, S.1
Martin, J.M.L.2
-
59
-
-
83455244950
-
Complete basis set extrapolation and hybrid schemes for geometry gradients of noncovalent complexes
-
Cerny J, Pitonak M, Riley KE, Hobza P (2011) Complete basis set extrapolation and hybrid schemes for geometry gradients of noncovalent complexes. J Chem Theory Comput 7:3924-3934
-
(2011)
J Chem Theory Comput
, vol.7
, pp. 3924-3934
-
-
Cerny, J.1
Pitonak, M.2
Riley, K.E.3
Hobza, P.4
-
60
-
-
0034600253
-
Hydrogen bonding in DNA base pairs: Reconciliation of theory and experiment
-
DOI 10.1021/ja993262d
-
Fonseca Guerra C, Bickelhaupt FM, Snijders JG, Baerends EJ (2000) Hydrogen bonding in DNA base pairs: reconciliation of theory and experiment. J Am Chem Soc 122:4117-4128 (Pubitemid 30304846)
-
(2000)
Journal of the American Chemical Society
, vol.122
, Issue.17
, pp. 4117-4128
-
-
Fonseca, G.C.1
Bickelhaupt, F.M.2
Snijders, J.G.3
Baerends, E.J.4
-
61
-
-
33645671083
-
Supramolecular switches based on the guanine-cytosine (GC) Watson-Crick pair: Effect of neutral and ionic substituents
-
Fonseca Guerra C, van der Wijst T, Bickelhaupt FM (2006) Supramolecular switches based on the guanine-cytosine (GC) Watson-Crick pair: effect of neutral and ionic substituents. Chem Eur J 12:3032-3042
-
(2006)
Chem Eur J
, vol.12
, pp. 3032-3042
-
-
Fonseca Guerra, C.1
Van Der Wijst, T.2
Bickelhaupt, F.M.3
-
63
-
-
80054901924
-
Telomere structure and stability: Covalency in hydrogen bonds, not resonance assistance, causes cooperativity in guanine quartets
-
Fonseca Guerra C, Zijlstra H, Paragi G, Bickelhaupt FM Telomere structure and stability: covalency in hydrogen bonds, not resonance assistance, causes cooperativity in guanine quartets. Chem Eur J 17:12612-12622
-
Chem Eur J
, vol.17
, pp. 12612-12622
-
-
Fonseca Guerra, C.1
Zijlstra, H.2
Paragi, G.3
Bickelhaupt, F.M.4
-
64
-
-
0346219429
-
Characterization of Hydrogen Bonds in the Interactions between the Hydroperoxyl Radical and Organic Acids
-
DOI 10.1021/ja036846v
-
Parreira RLT, Galembeck SE (2003) Characterization of hydrogen bonds in the interactions between the hydroperoxyl radical and organic acids. J Am Chem Soc 125:15614-15622 (Pubitemid 37532205)
-
(2003)
Journal of the American Chemical Society
, vol.125
, Issue.50
, pp. 15614-15622
-
-
Parreira, R.L.T.1
Galembeck, S.E.2
-
68
-
-
70349240342
-
Bond paths are not chemical bonds
-
Bader RFW (2009) Bond paths are not chemical bonds. J Phys Chem A 113:10391-10396
-
(2009)
J Phys Chem A
, vol.113
, pp. 10391-10396
-
-
Bader, R.F.W.1
-
69
-
-
0038476327
-
Hydrogen-hydrogen bonding: A stabilizing interaction in molecules and crystals
-
Matta CF, Hernandez-Trujillo J, Tang T-H, Bader RFW (2003) Hydrogen-hydrogen bonding: a stabilizing interaction in molecules and crystals. Chem Eur J 9:1940-1951
-
(2003)
Chem Eur J
, vol.9
, pp. 1940-1951
-
-
Matta, C.F.1
Hernandez-Trujillo, J.2
Tang, T.-H.3
Bader, R.F.W.4
-
70
-
-
36549030469
-
Bond paths as privileged exchange channels
-
DOI 10.1002/chem.200700408
-
Pendás AM, Francisco E, Blanco MA, Gatti C (2007) Bond paths as privileged Exchange chanels. Chem Eur J 13:9362-9371 (Pubitemid 350178600)
-
(2007)
Chemistry - A European Journal
, vol.13
, Issue.33
, pp. 9362-9371
-
-
Martin, P.A.1
Francisco, E.2
Blanco, M.A.3
Gatti, C.4
-
71
-
-
33846991987
-
Polycyclic benzenoids: Why kinked is more stable than straight
-
Poater J, Visser R, Solà M, Bickelhaupt FM (2007) Polycyclic benzenoids: why kinked is more stable than straight. J Org Chem 72:1134-1142
-
(2007)
J Org Chem
, vol.72
, pp. 1134-1142
-
-
Poater, J.1
Visser, R.2
Solà, M.3
Bickelhaupt, F.M.4
-
72
-
-
70349786459
-
When do interacting atoms form a chemical bond? Spectroscopic measurements and theoretical analyses of dideuteriophenanthrene
-
Grimme S, Muck-Lichtenfeld C, Erker G, Kehr G, Wang H, Beckers H, Willner H (2009) When do interacting atoms form a chemical bond? spectroscopic measurements and theoretical analyses of dideuteriophenanthrene. Angew Chem Int Ed 48:2592-2595
-
(2009)
Angew Chem Int Ed
, vol.48
, pp. 2592-2595
-
-
Grimme, S.1
Muck-Lichtenfeld, C.2
Erker, G.3
Kehr, G.4
Wang, H.5
Beckers, H.6
Willner, H.7
-
74
-
-
56349171200
-
The implications of symmetry of the external potential on bond paths
-
Cerpa E, Krapp A, Vela A, Merino G (2008) The implications of symmetry of the external potential on bond paths. Chem Eur J 14:10232-10234
-
(2008)
Chem Eur J
, vol.14
, pp. 10232-10234
-
-
Cerpa, E.1
Krapp, A.2
Vela, A.3
Merino, G.4
-
75
-
-
33645324416
-
Hydrogen-hydrogen bonding in planar biphenyl, predicted by atoms-In-molecules theory, does not exist
-
Poater J, Sola M, Bickelhaupt FM (2006) Hydrogen-hydrogen bonding in planar biphenyl, predicted by atoms-In-molecules theory, does not exist. Chem Eur J 12:2889-2895
-
(2006)
Chem Eur J
, vol.12
, pp. 2889-2895
-
-
Poater, J.1
Sola, M.2
Bickelhaupt, F.M.3
-
76
-
-
56349094298
-
Chemical bonding in the inclusion complex of He in adamantane (He@adam): The origin of the barrier to dissociation
-
Strenalyuk T, Haaland A (2008) Chemical bonding in the inclusion complex of He in adamantane (He@adam): the origin of the barrier to dissociation. Chem Eur J 14:10223-10226
-
(2008)
Chem Eur J
, vol.14
, pp. 10223-10226
-
-
Strenalyuk, T.1
Haaland, A.2
-
77
-
-
84859610965
-
2 (M=Li, Na, K; X=H, OH, F, Cl)
-
2 (M=Li, Na, K; X=H, OH, F, Cl). Chem Eur J 18:4982-4993
-
(2012)
Chem Eur J
, vol.18
, pp. 4982-4993
-
-
Dem'Yanov, P.1
Polestshuk, P.2
-
78
-
-
79954529867
-
What is the covalency of hydrogen bonding?
-
Grabowski SJ (2011) What is the covalency of hydrogen bonding? Chem Rev 111:2597-2625
-
(2011)
Chem Rev
, vol.111
, pp. 2597-2625
-
-
Grabowski, S.J.1
-
79
-
-
0034669695
-
Behavior of ylides containing N, O, and C atoms as hydrogen bond acceptors
-
Rozas I, Alkorta I, Elguero J (2000) Behavior of ylides containing N, O, and C atoms as hydrogen bond acceptors. J Am Chem Soc 122:11154-11161
-
(2000)
J Am Chem Soc
, vol.122
, pp. 11154-11161
-
-
Rozas, I.1
Alkorta, I.2
Elguero, J.3
-
80
-
-
33745789660
-
Cooperativity in hydrogen-bonded interactions: Ab initio and "atoms in molecules" analyses
-
DOI 10.1021/jp060537k
-
Ziołkowski M, Grabowski SJ, Leszczynski J (2006) Cooperativity in hydrogen-bonded interactions: ab initio and "atoms in molecules" analyses. J Phys Chem A 110:6514-6521 (Pubitemid 44020305)
-
(2006)
Journal of Physical Chemistry A
, vol.110
, Issue.20
, pp. 6514-6521
-
-
Ziolkowski, M.1
Grabowski, S.J.2
Leszczynski, J.3
-
81
-
-
0000938012
-
Characterization of a dihydrogen bond on the basis of the electron density
-
Popelier PLA (1998) Characterization of a dihydrogen bond on the basis of the electron density. J Phys Chem A 102:1873-1878 e Tecnológico
-
(1998)
J Phys Chem A
, vol.102
, pp. 1873-1878
-
-
Popelier, P.L.A.1
|