-
1
-
-
84859911648
-
Genetics and epigenetics of cutaneous malignant melanoma: A concert out of tune
-
van den Hurk K, Niessen HE, Veeck J, van den Oord JJ, van Steensel MA, et al. (2012) Genetics and epigenetics of cutaneous malignant melanoma: a concert out of tune. Biochim Biophys Acta 1826: 89-102.
-
(2012)
Biochim Biophys Acta
, vol.1826
, pp. 89-102
-
-
Van Den Hurk, K.1
Niessen, H.E.2
Veeck, J.3
Van Den Oord, J.J.4
Van Steensel, M.A.5
-
2
-
-
85027954125
-
DNA methylation profiling in the clinic: Applications and challenges
-
Heyn H, Esteller M (2012) DNA methylation profiling in the clinic: applications and challenges. Nat Rev Genet 13: 679-692.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 679-692
-
-
Heyn, H.1
Esteller, M.2
-
3
-
-
77955700020
-
Genome-wide hypomethylation in cancer may be a passive consequence of transformation
-
Wild L, Flanagan JM (2010) Genome-wide hypomethylation in cancer may be a passive consequence of transformation. Biochim Biophys Acta 1806: 50-57.
-
(2010)
Biochim Biophys Acta
, vol.1806
, pp. 50-57
-
-
Wild, L.1
Flanagan, J.M.2
-
4
-
-
0242610894
-
Mechanisms of DNA Damage, DNA Hypomethylation, and Tumor Progression in the Folate/Methyl-Deficient Rat Model of Hepatocarcinogenesis
-
James SJ, Pogribny IP, Pogribna M, Miller BJ, Jernigan S, et al. (2003) Mechanisms of DNA damage, DNA hypomethylation, and tumor progression in the folate/methyl-deficient rat model of hepatocarcinogenesis. J Nutr 133: 3740S-3747S. (Pubitemid 37406630)
-
(2003)
Journal of Nutrition
, vol.133
, Issue.11 SUPPL. 1
-
-
James, S.J.1
Pogribny, I.P.2
Pogribna, M.3
Miller, B.J.4
Jernigan, S.5
Melnyk, S.6
-
5
-
-
84872142934
-
The COMPASS subunit Spp1 links histone methylation to initiation of meiotic recombination
-
Acquaviva L, Szekvolgyi L, Dichtl B, Dichtl BS, de La Roche Saint Andre C, et al. (2013) The COMPASS subunit Spp1 links histone methylation to initiation of meiotic recombination. Science 339: 215-218.
-
(2013)
Science
, vol.339
, pp. 215-218
-
-
Acquaviva, L.1
Szekvolgyi, L.2
Dichtl, B.3
Dichtl, B.S.4
De La Roche Saint Andre, C.5
-
6
-
-
79954457432
-
Methylome analysis reveals Jak-STAT pathway deregulation in putative breast cancer stem cells
-
Hernandez-Vargas H, Ouzounova M, Le Calvez-Kelm F, Lambert MP, McKay-Chopin S, et al. (2011) Methylome analysis reveals Jak-STAT pathway deregulation in putative breast cancer stem cells. Epigenetics 6: 428-439.
-
(2011)
Epigenetics
, vol.6
, pp. 428-439
-
-
Hernandez-Vargas, H.1
Ouzounova, M.2
Le Calvez-Kelm, F.3
Lambert, M.P.4
McKay-Chopin, S.5
-
7
-
-
80053455840
-
Identification of a DNA methylome signature of esophageal squamous cell carcinoma and potential epigenetic biomarkers
-
Lima SC, Hernandez-Vargas H, Simao T, Durand G, Kruel CD, et al. (2011) Identification of a DNA methylome signature of esophageal squamous cell carcinoma and potential epigenetic biomarkers. Epigenetics 6: 1217-1227.
-
(2011)
Epigenetics
, vol.6
, pp. 1217-1227
-
-
Lima, S.C.1
Hernandez-Vargas, H.2
Simao, T.3
Durand, G.4
Kruel, C.D.5
-
8
-
-
77957361278
-
Hepatocellular carcinoma displays distinct DNA methylation signatures with potential as clinical predictors
-
Hernandez-Vargas H, Lambert MP, Le Calvez-Kelm F, Gouysse G, McKay-Chopin S, et al. (2010) Hepatocellular carcinoma displays distinct DNA methylation signatures with potential as clinical predictors. PLoS One 5: e9749.
-
(2010)
PLoS One
, vol.5
-
-
Hernandez-Vargas, H.1
Lambert, M.P.2
Le Calvez-Kelm, F.3
Gouysse, G.4
McKay-Chopin, S.5
-
9
-
-
11844302899
-
Promoter methylation profiling of 30 genes in human malignant melanoma
-
DOI 10.1111/j.1349-7006.2004.tb03184.x
-
Furuta J, Umebayashi Y, Miyamoto K, Kikuchi K, Otsuka F, et al. (2004) Promoter methylation profiling of 30 genes in human malignant melanoma. Cancer Sci 95: 962-968. (Pubitemid 40089588)
-
(2004)
Cancer Science
, vol.95
, Issue.12
, pp. 962-968
-
-
Furuta, J.1
Umebayashi, Y.2
Miyamoto, K.3
Kikuchi, K.4
Otsuka, F.5
Sugimura, T.6
Ushijima, T.7
-
10
-
-
33644659012
-
Epigenetic inactivation of tumor suppressor genes in serum of patients with cutaneous melanoma
-
DOI 10.1038/sj.jid.5700073, PII 5700073
-
Marini A, Mirmohammadsadegh A, Nambiar S, Gustrau A, Ruzicka T, et al. (2006) Epigenetic inactivation of tumor suppressor genes in serum of patients with cutaneous melanoma. J Invest Dermatol 126: 422-431. (Pubitemid 43323180)
-
(2006)
Journal of Investigative Dermatology
, vol.126
, Issue.2
, pp. 422-431
-
-
Marini, A.1
Mirmohammadsadegh, A.2
Nambiar, S.3
Gustrau, A.4
Ruzicka, T.5
Hengge, U.R.6
-
11
-
-
33746159061
-
Estrogen receptor-alpha methylation predicts melanoma progression
-
DOI 10.1158/0008-5472.CAN-06-0801
-
Mori T, Martinez SR, O'Day SJ, Morton DL, Umetani N, et al. (2006) Estrogen receptor-alpha methylation predicts melanoma progression. Cancer Res 66: 6692-6698. (Pubitemid 44085626)
-
(2006)
Cancer Research
, vol.66
, Issue.13
, pp. 6692-6698
-
-
Mori, T.1
Martinez, S.R.2
O'Day, S.J.3
Morton, D.L.4
Umetani, N.5
Kitago, M.6
Tanemura, A.7
Nguyen, S.L.8
Tran, A.N.9
Wang, H.-J.10
Hoon, D.S.B.11
-
12
-
-
49649125674
-
Identification of novel epigenetically modified genes in human melanoma via promoter methylation gene profiling
-
Liu S, Ren S, Howell P, Fodstad O, Riker AI (2008) Identification of novel epigenetically modified genes in human melanoma via promoter methylation gene profiling. Pigment Cell Melanoma Res 21: 545-558.
-
(2008)
Pigment Cell Melanoma Res
, vol.21
, pp. 545-558
-
-
Liu, S.1
Ren, S.2
Howell, P.3
Fodstad, O.4
Riker, A.I.5
-
13
-
-
75549087174
-
Methylation of PTEN as a prognostic factor in malignant melanoma of the skin
-
Lahtz C, Stranzenbach R, Fiedler E, Helmbold P, Dammann RH (2010) Methylation of PTEN as a prognostic factor in malignant melanoma of the skin. J Invest Dermatol 130: 620-622.
-
(2010)
J Invest Dermatol
, vol.130
, pp. 620-622
-
-
Lahtz, C.1
Stranzenbach, R.2
Fiedler, E.3
Helmbold, P.4
Dammann, R.H.5
-
14
-
-
77953306334
-
Epigenetics of human cutaneous melanoma: Setting the stage for new therapeutic strategies
-
Sigalotti L, Covre A, Fratta E, Parisi G, Colizzi F, et al. (2010) Epigenetics of human cutaneous melanoma: setting the stage for new therapeutic strategies. J Transl Med 8: 56.
-
(2010)
J Transl Med
, vol.8
, pp. 56
-
-
Sigalotti, L.1
Covre, A.2
Fratta, E.3
Parisi, G.4
Colizzi, F.5
-
15
-
-
79952585519
-
DNA-methylation profiling distinguishes malignant melanomas from benign nevi
-
Conway K, Edmiston SN, Khondker ZS, Groben PA, Zhou X, et al. (2011) DNA-methylation profiling distinguishes malignant melanomas from benign nevi. Pigment Cell Melanoma Res 24: 352-360.
-
(2011)
Pigment Cell Melanoma Res
, vol.24
, pp. 352-360
-
-
Conway, K.1
Edmiston, S.N.2
Khondker, Z.S.3
Groben, P.A.4
Zhou, X.5
-
16
-
-
84856306090
-
Genomewide DNA methylation profiling using Infinium(R) assay
-
Bibikova M, Le J, Barnes B, Saedinia-Melnyk S, Zhou L, et al. (2009) Genomewide DNA methylation profiling using Infinium(R) assay. Epigenomics 1: 177-200.
-
(2009)
Epigenomics
, vol.1
, pp. 177-200
-
-
Bibikova, M.1
Le, J.2
Barnes, B.3
Saedinia-Melnyk, S.4
Zhou, L.5
-
17
-
-
68549135349
-
Copy number variation has little impact on bead-array-based measures of DNA methylation
-
Houseman EA, Christensen BC, Karagas MR, Wrensch MR, Nelson HH, et al. (2009) Copy number variation has little impact on bead-array-based measures of DNA methylation. Bioinformatics 25: 1999-2005.
-
(2009)
Bioinformatics
, vol.25
, pp. 1999-2005
-
-
Houseman, E.A.1
Christensen, B.C.2
Karagas, M.R.3
Wrensch, M.R.4
Nelson, H.H.5
-
18
-
-
77955042687
-
Integrated profiling reveals a global correlation between epigenetic and genetic alterations in mesothelioma
-
Christensen BC, Houseman EA, Poage GM, Godleski JJ, Bueno R, et al. (2010) Integrated profiling reveals a global correlation between epigenetic and genetic alterations in mesothelioma. Cancer Res 70: 5686-5694.
-
(2010)
Cancer Res
, vol.70
, pp. 5686-5694
-
-
Christensen, B.C.1
Houseman, E.A.2
Poage, G.M.3
Godleski, J.J.4
Bueno, R.5
-
19
-
-
79953318394
-
Integrative genomics identifies molecular alterations that challenge the linear model of melanoma progression
-
Rose AE, Poliseno L, Wang J, Clark M, Pearlman A, et al. (2011) Integrative genomics identifies molecular alterations that challenge the linear model of melanoma progression. Cancer Res 71: 2561-2571.
-
(2011)
Cancer Res
, vol.71
, pp. 2561-2571
-
-
Rose, A.E.1
Poliseno, L.2
Wang, J.3
Clark, M.4
Pearlman, A.5
-
21
-
-
84860743139
-
Marked genetic differences between BRAF and NRAS mutated primary melanomas as revealed by array comparative genomic hybridization
-
Lazar V, Ecsedi S, Vizkeleti L, Rakosy Z, Boross G, et al. (2012) Marked genetic differences between BRAF and NRAS mutated primary melanomas as revealed by array comparative genomic hybridization. Melanoma Res 22: 202-214.
-
(2012)
Melanoma Res
, vol.22
, pp. 202-214
-
-
Lazar, V.1
Ecsedi, S.2
Vizkeleti, L.3
Rakosy, Z.4
Boross, G.5
-
22
-
-
85027938790
-
The role of CCND1 alterations during the progression of cutaneous malignant melanoma
-
Vizkeleti L, Ecsedi S, Rakosy Z, Orosz A, Lazar V, et al. (2012) The role of CCND1 alterations during the progression of cutaneous malignant melanoma. Tumour Biol 33: 2189-2199.
-
(2012)
Tumour Biol
, vol.33
, pp. 2189-2199
-
-
Vizkeleti, L.1
Ecsedi, S.2
Rakosy, Z.3
Orosz, A.4
Lazar, V.5
-
23
-
-
84873881608
-
Integrative genomics identifies gene signature associated with melanoma ulceration
-
Rakosy Z, Ecsedi S, Toth R, Vizkeleti L, Herandez-Vargas H, et al. (2013) Integrative genomics identifies gene signature associated with melanoma ulceration. PLoS One 8: e54958.
-
(2013)
PLoS One
, vol.8
-
-
Rakosy, Z.1
Ecsedi, S.2
Toth, R.3
Vizkeleti, L.4
Herandez-Vargas, H.5
-
24
-
-
33745925864
-
BRAF somatic mutations in malignant melanoma and melanocytic naevi
-
Thomas NE (2006) BRAF somatic mutations in malignant melanoma and melanocytic naevi. Melanoma Res 16: 97-103.
-
(2006)
Melanoma Res
, vol.16
, pp. 97-103
-
-
Thomas, N.E.1
-
25
-
-
65349136425
-
Distinct patterns of DNA copy number alterations associate with BRAF mutations in melanomas and melanoma-derived cell lines
-
Greshock J, Nathanson K, Medina A, Ward MR, Herlyn M, et al. (2009) Distinct patterns of DNA copy number alterations associate with BRAF mutations in melanomas and melanoma-derived cell lines. Genes Chromosomes Cancer 48: 419-428.
-
(2009)
Genes Chromosomes Cancer
, vol.48
, pp. 419-428
-
-
Greshock, J.1
Nathanson, K.2
Medina, A.3
Ward, M.R.4
Herlyn, M.5
-
26
-
-
84862907872
-
The BRAF(V600E) causes widespread alterations in gene methylation in the genome of melanoma cells
-
Hou P, Liu D, Dong J, Xing M (2012) The BRAF(V600E) causes widespread alterations in gene methylation in the genome of melanoma cells. Cell Cycle 11: 286-295.
-
(2012)
Cell Cycle
, vol.11
, pp. 286-295
-
-
Hou, P.1
Liu, D.2
Dong, J.3
Xing, M.4
-
27
-
-
77954787488
-
2010 TNM staging system for cutaneous melanoma...And beyond
-
Gershenwald JE, Soong SJ, Balch CM (2010) 2010 TNM staging system for cutaneous melanoma...and beyond. Ann Surg Oncol 17: 1475-1477.
-
(2010)
Ann Surg Oncol
, vol.17
, pp. 1475-1477
-
-
Gershenwald, J.E.1
Soong, S.J.2
Balch, C.M.3
-
28
-
-
78649475003
-
Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis
-
Du P, Zhang X, Huang CC, Jafari N, Kibbe WA, et al. (2010) Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis. BMC Bioinformatics 11: 587.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 587
-
-
Du, P.1
Zhang, X.2
Huang, C.C.3
Jafari, N.4
Kibbe, W.A.5
-
29
-
-
38049100456
-
Assessing the significance of chromosomal aberrations in cancer: Methodology and application to glioma
-
Beroukhim R, Getz G, Nghiemphu L, Barretina J, Hsueh T, et al. (2007) Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma. Proc Natl Acad Sci U S A 104: 20007-20012.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 20007-20012
-
-
Beroukhim, R.1
Getz, G.2
Nghiemphu, L.3
Barretina, J.4
Hsueh, T.5
-
30
-
-
0037076272
-
Diagnosis of multiple cancer types by shrunken centroids of gene expression
-
DOI 10.1073/pnas.082099299
-
Tibshirani R, Hastie T, Narasimhan B, Chu G (2002) Diagnosis of multiple cancer types by shrunken centroids of gene expression. Proc Natl Acad Sci U S A 99: 6567-6572. (Pubitemid 34526173)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.10
, pp. 6567-6572
-
-
Tibshirani, R.1
Hastie, T.2
Narasimhan, B.3
Chu, G.4
-
31
-
-
84870937252
-
Genomics of human malignant melanoma
-
Tanaka IY, editor. Rijeka: InTech
-
Balazs M, Ecsedi S, Vizkeleti L, Begany A (2011) Genomics of human malignant melanoma. In: Tanaka IY, editor.Breakthroughs in melanoma research. Rijeka: InTech. pp. pp. 237-263.
-
(2011)
Breakthroughs in Melanoma Research
, pp. 237-263
-
-
Balazs, M.1
Ecsedi, S.2
Vizkeleti, L.3
Begany, A.4
-
32
-
-
80054739563
-
The hunt for 5-hydroxymethylcytosine: The sixth base
-
Song CX, He C (2011) The hunt for 5-hydroxymethylcytosine: the sixth base. Epigenomics 3: 521-523.
-
(2011)
Epigenomics
, vol.3
, pp. 521-523
-
-
Song, C.X.1
He, C.2
-
33
-
-
84866419591
-
Loss of 5-hydroxymethylcytosine is an epigenetic hallmark of melanoma
-
Lian CG, Xu Y, Ceol C, Wu F, Larson A, et al. (2012) Loss of 5-hydroxymethylcytosine is an epigenetic hallmark of melanoma. Cell 150: 1135-1146.
-
(2012)
Cell
, vol.150
, pp. 1135-1146
-
-
Lian, C.G.1
Xu, Y.2
Ceol, C.3
Wu, F.4
Larson, A.5
-
34
-
-
67849109939
-
CpG island methylation profiling in human melanoma cell lines
-
Tellez CS, Shen L, Estecio MR, Jelinek J, Gershenwald JE, et al. (2009) CpG island methylation profiling in human melanoma cell lines. Melanoma Res 19: 146-155.
-
(2009)
Melanoma Res
, vol.19
, pp. 146-155
-
-
Tellez, C.S.1
Shen, L.2
Estecio, M.R.3
Jelinek, J.4
Gershenwald, J.E.5
-
35
-
-
73349132690
-
A clustering of immune-mediated polyradiculoneuropathy among swine abattoir workers exposed to aerosolized porcine brains, Indiana, United States
-
Adjemian JZ, Howell J, Holzbauer S, Harris J, Recuenco S, et al. (2009) A clustering of immune-mediated polyradiculoneuropathy among swine abattoir workers exposed to aerosolized porcine brains, Indiana, United States. Int J Occup Environ Health 15: 331-338.
-
(2009)
Int J Occup Environ Health
, vol.15
, pp. 331-338
-
-
Adjemian, J.Z.1
Howell, J.2
Holzbauer, S.3
Harris, J.4
Recuenco, S.5
-
36
-
-
84865662831
-
Whole genome methylation profiles as independent markers of survival in stage IIIC melanoma patients
-
Sigalotti L, Covre A, Fratta E, Parisi G, Sonego P, et al. (2012) Whole genome methylation profiles as independent markers of survival in stage IIIC melanoma patients. J Transl Med 10: 185.
-
(2012)
J Transl Med
, vol.10
, pp. 185
-
-
Sigalotti, L.1
Covre, A.2
Fratta, E.3
Parisi, G.4
Sonego, P.5
-
37
-
-
31844454774
-
Altered patterns of transcription of the septin gene, SEPT9, in ovarian tumorigenesis
-
DOI 10.1002/ijc.21486
-
Scott M, McCluggage WG, Hillan KJ, Hall PA, Russell SE (2006) Altered patterns of transcription of the septin gene, SEPT9, in ovarian tumorigenesis. Int J Cancer 118: 1325-1329. (Pubitemid 43185625)
-
(2006)
International Journal of Cancer
, vol.118
, Issue.5
, pp. 1325-1329
-
-
Scott, M.1
McCluggage, W.G.2
Hillan, K.J.3
Hall, P.A.4
Russell, S.E.H.5
-
38
-
-
79953327929
-
IL8 and Cathepsin B as Melanoma Serum Biomarkers
-
Zhang H, Fu T, McGettigan S, Kumar S, Liu S, et al. (2011) IL8 and Cathepsin B as Melanoma Serum Biomarkers. Int J Mol Sci 12: 1505-1518.
-
(2011)
Int J Mol Sci
, vol.12
, pp. 1505-1518
-
-
Zhang, H.1
Fu, T.2
McGettigan, S.3
Kumar, S.4
Liu, S.5
-
39
-
-
80053171905
-
Promoter methylation and downregulation of SLC22A18 are associated with the development and progression of human glioma
-
Chu SH, Feng DF, Ma YB, Zhang H, Zhu ZA, et al. (2011) Promoter methylation and downregulation of SLC22A18 are associated with the development and progression of human glioma. J Transl Med 9: 156.
-
(2011)
J Transl Med
, vol.9
, pp. 156
-
-
Chu, S.H.1
Feng, D.F.2
Ma, Y.B.3
Zhang, H.4
Zhu, Z.A.5
-
40
-
-
84865193393
-
Epigenetic genes regulated by the BRAFV600E signaling are associated with alterations in the methylation and expression of tumor suppressor genes and patient survival in melanoma
-
Liu D, Liu X, Xing M (2012) Epigenetic genes regulated by the BRAFV600E signaling are associated with alterations in the methylation and expression of tumor suppressor genes and patient survival in melanoma. Biochem Biophys Res Commun 425: 45-50.
-
(2012)
Biochem Biophys Res Commun
, vol.425
, pp. 45-50
-
-
Liu, D.1
Liu, X.2
Xing, M.3
-
41
-
-
84877142499
-
Epigenetic alterations in colorectal cancer: The CpG island methylator phenotype
-
Bae JM, Kim JH, Kang GH (2013) Epigenetic alterations in colorectal cancer: the CpG island methylator phenotype. Histol Histopathol.
-
(2013)
Histol Histopathol
-
-
Bae, J.M.1
Kim, J.H.2
Kang, G.H.3
-
42
-
-
84876929302
-
BRAF mutation-specific promoter methylation of FOX genes in colorectal cancer
-
van Roon EH, Boot A, Dihal AA, Ernst RF, van Wezel T, et al. (2013) BRAF mutation-specific promoter methylation of FOX genes in colorectal cancer. Clin Epigenetics 5: 2.
-
(2013)
Clin Epigenetics
, vol.5
, pp. 2
-
-
Van Roon, E.H.1
Boot, A.2
Dihal, A.A.3
Ernst, R.F.4
Van Wezel, T.5
-
43
-
-
84858996803
-
Fluorescence in-situ hybridization analysis for melanoma diagnosis
-
Senetta R, Paglierani M, Massi D (2012) Fluorescence in-situ hybridization analysis for melanoma diagnosis. Histopathology 60: 706-714.
-
(2012)
Histopathology
, vol.60
, pp. 706-714
-
-
Senetta, R.1
Paglierani, M.2
Massi, D.3
-
44
-
-
84862103569
-
A highly specific and discriminatory FISH assay for distinguishing between benign and malignant melanocytic neoplasms
-
Gerami P, Li G, Pouryazdanparast P, Blondin B, Beilfuss B, et al. (2012) A highly specific and discriminatory FISH assay for distinguishing between benign and malignant melanocytic neoplasms. Am J Surg Pathol 36: 808-817.
-
(2012)
Am J Surg Pathol
, vol.36
, pp. 808-817
-
-
Gerami, P.1
Li, G.2
Pouryazdanparast, P.3
Blondin, B.4
Beilfuss, B.5
|